FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807581

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807581
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences81379
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG3901947.94725912090343No Hit
CATAGAAGAGTGAGACTTGAGATGGGATCAGACTTTATGTGCAATCTATG40935.029553078804114No Hit
CATAGAGGTAAACAAAATAAGACATTACATAGGAGTAAAGTGCTGTACTT39354.835399796016171No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACACCTGTAATCACAGC14351.7633541822828984No Hit
CATAGACACATGTAGGATGGGGTGGAGGATGATCAATGCTGCTTCTATGA11751.4438614384546382No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG11151.3701323437250397No Hit
CATAGAGGGTGCTCCTGTGCTGGGTAGTGGTAGTCTATGAGACCAAGTCT9011.1071652391894715No Hit
CATAGACTTCAGCCCTCACAAGCCTTACCTCAAATGCCAGGCTCTATGAG9001.1059364209439781No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACCAAAAACAATACAAAAAT6030.7409774020324653No Hit
CATAGAAGAGTGAGACTTGAGATGGGAGGATGAGGTCAAGGTGGGAGGAT5010.6156379409921479No Hit
CATAGAGCTATCTGGCAAAAACCCATCCTACATGTGCCATGATTGTAAGT4940.6070362132736946No Hit
CATAGAGGGTGCTCCTGTACTGGGTAGTGGTAGTCTATGAGACCAAGTCT4750.5836886666093218No Hit
CATAGACACATGTAGGATGGGGTGGCTGGAGTGGGTGGGGCGGCCGAGTT4470.5492817557355092No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAATCACAGCACTTT4170.5124172083707099No Hit
CATAGACACATGTAGGATGGGGTGGCTGGGCATTGCTCTTGACATCTCTA3860.4743238427604173No Hit
CATAGAGGTGTCCTTTCCCCACTTTACTCAGCACTCATTCTATCTCCTGT3850.47309502451492397No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAATCCCAGCACTTT3780.46449329679647083No Hit
CATAGAGCATTACCCTCAAACTATCCCTACACTGACGACATGGTATATTT3760.4620356603054842No Hit
CATAGACACATGTAGGATGGGGTGGCTTCCCTTACACCTTCTGCCATGAT3060.3760183831209526No Hit
CATAGACACATGTAGGATGGGGTGGCTCATGCGTGTCATCCCAGCCCTTT3030.37233192838447265No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTGCTGGAGGATGATCAATGCT2890.35512847294756633No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTATTATCCTAGCACTTT2860.3514420182110864No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATCTGGACCTGCG2460.302289288391354No Hit
CATAGACACATGTAGGATGGGGTGGCTGTGCTGGGTAGTGGTAGTCTATG2420.2973740154093808No Hit
CATAGACACATGTAGGATGGGGTGGCTCATGCCTGTAATCCTAACACTTT2410.2961451971638875No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG2400.2949163789183942No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG2360.2900011059364209No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTGGTAGTCTATGAGACCAAGTCT2240.2752552869905012No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAGTAATAGCACTTT2000.2457636490986618No Hit
CATAGAGGGTGCTCCTGTACTGGGTGCTGAGTCCCATTTCTGTTGTACTG1970.24207719436218192No Hit
CATAGACACATGTAGGATGGGGTGGGCATTGCTCTTGACATCTCTATGAG1950.23961955787119527No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACGCCTATAATTCCAGC1780.21872964769780903No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG1760.2162720112068224No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG1760.2162720112068224No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG1570.19292446454244952No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACAAAATATACAAAAATTAG1530.1880091915604763No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG1510.18555155506948967No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG1490.18309391857850305No Hit
CATAGAAGCATGGAAGACAAACAGCATGGCGGTGTTTGCAGATTTGGACC1480.18186510033300973No Hit
CATAGAGGGTGCTCCTGTACTGGGTGTGCTGGGTAGTGGTAGTCTATGAG1450.17817864559652982No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCATGCCTATAATTCCAGC1400.1720345543690633No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG1370.16834809963258335No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTGTGCTGGGTAGTGGTAGTCT1290.15851755366863687No Hit
CATAGACACATGTAGGATGGGGTGGCTCCTGTGCTGGGTAGTGGTAGTCT1280.15728873542314356No Hit
CATAGAGGTAAACAAAATAAGACATTACATAGGAGTATCATGGGATCAGA1280.15728873542314356No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG1270.15605991717765025No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTATAAAAAATATGCAAAATTA1250.15360228068666365No Hit
CATAGATCATGGGACTTCAGCATGGGCATTGCTCTTGACATCTCTATGAG1250.15360228068666365No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACGCCTGTAATCCCAGC1030.12656827928581083No Hit
CATAGAGATAAACAAAATAAGACATTACATAGGAGTAAAGTGCTGTACTT1010.12411064279482423No Hit
CATAGAAAAGTGAGACTTGAGATGGGATCAGACTTTATGTGCAATCTATG1000.1228818245493309No Hit
CATAGAACCAAAAATGGCTAGGCATGTTGGCTCACACCTGTAATCACAGC980.12042418805834429No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACACCTGTAATCCCAGC980.12042418805834429No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGTG970.11919536981285098No Hit
CATAGATCATGGGACTTCAGCATGGTGGTGTTTGCAGATTTGGACCTGCG970.11919536981285098No Hit
CATAGACACATGTAGGATGGGGTGGTATATTTTCTAAAGCCTGGGATCTA960.11796655156735766No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGCTTTGGACCTGCG950.11673773332186436No Hit
CATAGACACATGTAGGATGGGGTGGCTCATGCCTATAATCCAAGCACTTT940.11550891507637105No Hit
CATAGACACATGTAGGATGGGGTGGCCGTGTCCTGCCAGCAAGGGAACAA940.11550891507637105No Hit
CATAGACACATGTAGGATGGGGTGGCCAGAGCTGCGGGGGCTGAGAAACA930.11428009683087774No Hit
CATAGAGCATTACCCTCAAACTATCCCTACACTGACGACATGGTTCTACA930.11428009683087774No Hit
CATAGACTTCAGCCCTCACAAGCCTTCACTAACCACCTATCTACCCCCGG930.11428009683087774No Hit
CATAGAGGGTGCTCCTGTACTGGCTGTGCTGGGTAGTGGTAGTCTATGAG890.10936482384890452No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTGGTATATTTTCTAAAGCCTGGG890.10936482384890452No Hit
CATAGACTGGTCTCGAACTCCCAACCTCAGGGTGATCTGCCCACCTTTGC880.1081360056034112No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGCCCTGCG870.10690718735791788No Hit
CATAGAGGGTGCTCCTGTACTGGGTGCTGTGCTGGGTAGTGGTAGTCTAT860.10567836911242459No Hit
CATAGATCATGGGACTTCAGCATGGCAGTGTTTGCAGATTTGGACCTGCG860.10567836911242459No Hit
CATAGAAGCATGGAAGACAAACAGCACAAAAAGCCTGACAATTCCAAAAA860.10567836911242459No Hit
CATAGAGGGTTGGAGATGGGGAAAGGACACCTGGAGGATGATCAATGCTG860.10567836911242459No Hit
CATAGAAAATAATGTGGCCGGGCATGGTAGCTCATGCCTGTAATCCCAGT830.10199191437594467No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)