FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807583

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807583
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences67224
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG3168547.133464238962276No Hit
CATAGAGAATTTGCACACCACGGGACATGGATGAAGCTGGATCTATGAGA27684.1175770558134No Hit
CATAGATGTCTCCCAGGCTAGAGTGAGCCCTTGTCCCTTTCTATGAGACC17262.567535404022373No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGACGACATGGTTCTA9611.429548970605736No Hit
CATAGATCATGGGACTTCAGCATGGTGGGTGCCTGATTGTTCTATGAGAC8761.303106033559443No Hit
CATAGACCACACCCAAACACCACGTACACTGACGACATGGTTCTACACAT6400.9520409377603237No Hit
CATAGAGAATTTGCACACCACGGGACCATGCTCACACCTTGATCTATGAG6250.9297274782815661No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAATCAGGGTTGGTTCTATGAGACC4910.7303939069379983No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCACTGACGACATGGTTCTACACAT4800.7140307033202428No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGCAACAGAACAACAACATCTATG4530.6738664762584792No Hit
CATAGAGGGTGTTTTTCGGTGTTACAACCAATGCTCTTTCATCTATGAGA4060.6039509698917054No Hit
CATAGACCTTCCTGTTGGCCACACAGAATTAGCGGAGAGTGAGAACTCTA3860.5741996905866953No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGAGAGGCTGTTTGAGATCT3810.5667618707604427No Hit
CATAGACAGGAGGAGGAAGAAGAGGAAGAAGAAGAGAGCCTCTGTCCCTG3800.5652743067951922No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAACAGAACAACAACATCTATG3670.5459359752469356No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGTGAGAAATGATGATGGCT3570.5310603355944306No Hit
CATAGAACAAGGCCAGAATTACCCTGGGTGAGAAATGATGATGGCTCTAT3530.5251100797334285No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTGCTACCGTAGACTCTTCACT3160.4700702130191598No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGTGCTCATACAGAATTAGATC3060.45519457336665475No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGACACTGACGACATGGGCAAC3020.4492443175056527No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACATGGATGAAGC2960.4403189337141497No Hit
CATAGAGAAGAGAAGGCGACAATGGCTGCTTTTCTCTTCTTGGCATCTAT2930.4358562418183982No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGTGAGCCCTTGTCCCTTTCTATG2860.42544329406164466No Hit
CATAGAACAAGGCCAGAATTACCCTGTGTCAGTGAGCTTGGGTGACAGAG2850.4239557300963942No Hit
CATAGAGGGTGTTTTTCGGTGTCACAACCAATGCTCTTTCATCTATGAGA2630.3912293228608831No Hit
CATAGACAGCTCACAGACTGCATACTACACTGGAGACAGCCGCTCACCTC2530.376353683208378No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTGCTACCGTAGCTGCTTTTCTC2460.3659407354516244No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTGACGACATGGTTCTACACA2430.3614780435558729No Hit
CATAGAACAAGGCCAGAATTACCCTGGGAGAGGCTGTTTGAGATCTATGA2360.3510650957991193No Hit
CATAGAGGGTGTTTTTCGGTGTCACAGACGACATGGTTCTACACATAGAG2270.3376770201118648No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTATGAGACACTTCAGTTGACTA2130.31685112459835774No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGACTCTTCACTATGT2040.30346304891110315No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG1980.29453766511960017No Hit
CATAGACAGCTCACAGACTGCATACTACACTGACGACATGACTCTTCACT1870.2781744615018446No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTGACGACATGGTGGGTGCCT1820.2707366416755921No Hit
CATAGATCTGTGGCTCCCGATAAATGTGCTCATACAGAATTAGATCTAGC1810.26924907771034157No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCAGGCCTGAGATTGCTGCTAT1660.24693561823158397No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTGGCCCTCTATGTGTAGAACT1630.24247292633583242No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGAGGAATTCTTGCCA1600.23801023444008093No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG1570.23354754254432938No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACCATGCTCACAC1530.22759728668332738No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAACCCAAAGAGTGAGCCCTTGTCC1480.22015946685707485No Hit
CATAGACAGCTCACAGACTGCATACTACACTGACGACATGGTGGGTGCCT1400.20825895513507084No Hit
CATAGACAGCTGACCAGAAAATGTTTCAGTGTAGAATTAGCGGAGAGTGA1380.2052838272045698No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGAGTGAGCCCTTGTCCCTTTCTA1350.20082113530881826No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG1310.19487087944781625No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG1310.19487087944781625No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCGTAGTGTTACAACCAATGCTC1300.19338331548256577No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG1260.18743305962156373No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATCTGGACCTGCG1240.18445793169106273No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGAGACAGCCGCTCACCTCTA1240.18445793169106273No Hit
CATAGATGTCTCCCAGGCTAGAGTGCGCCCTTGTCCCTTTCTATGAGACC1240.18445793169106273No Hit
CATAGAGCAAAAGAGAAACATTAAGCCATAGTACACTGACGACATGGTGG1220.1814828037605617No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG1220.1814828037605617No Hit
CATAGACCACACCCAAACACCACGTAGCCATAAACAAGGATGAGTTCATG1220.1814828037605617No Hit
CATAGAGGGTGTTTTTCGGTGTCACACACTGACGACATGGTTCTACACAT1170.17404498393430917No Hit
CATAGAGAAGAGAAGGCGACAATGGCCGCTAAGCCGAGAAGATCTCTATG1170.17404498393430917No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTGCTACCGTAGCTTGGGTGACA1170.17404498393430917No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG1140.16958229203855765No Hit
CATAGATTAGTTCTTATTCTTGGTATGGCACGCAGAATTAGCGGAGAGTG1130.16809472807330714No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG1100.16363203617755562No Hit
CATAGACTTGATGCCCAGGAAACCTCACACTCAGACATGTTTCCTAGTTT1080.16065690824705461No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGACACTGACGACATGGTGTTA1040.1547066523860526No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCGAAAGGCTCCATATTAGGAAT1030.1532190884208021No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGACACTGACGACATGGTGGGT1020.15173152445555158No Hit
CATAGATCATGGGACTTCAGCATGGTGGTGTTTGCAGATTTGGACCTGCG1000.14875639652505057No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCTGACGACATGGTTCTACACATAG970.14429370462929905No Hit
CATAGAGGGCCAGAAGTTTGTTTACCTCACTGACGACATGGTGGGTGCCT960.14280614066404856No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG940.13983101273354753No Hit
CATAGACAGCTGACCAGAAAATGTTTCAGACATGTTTCCTAGTTTCAGTT910.13536832083779604No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG880.13090562894204452No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGCTGCTTTTCTCTTCTTGGCA840.12495537308104249No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGATCTGCG820.12198024515054147No Hit
CATAGAACCCAAAGAGTGAGCAGCAGACGACATGGTTCTACACATAGAAC800.11900511722004047No Hit
CATAGACCCTTAGAGTTTCAGCCTCCGTACATGGTGGGTGCCTGATTGTT790.11751755325478995No Hit
CATAGAACCCAAAGAGTGAGCAGCAGTTCTACACATAGAACCCAAAGAGT780.11602998928953946No Hit
CATAGAGAATTTGCACACCACGGGACATGGATGAAGCTGGACCTATGAGA780.11602998928953946No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGGAGACAGCCGCTCA760.11305486135903843No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGCTTTTCTCTTCTTGGCATCT750.11156729739378794No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTTGACCTGCG740.11007973342853743No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGTACCTGCG730.10859216946328691No Hit
CATAGAACCCAAAGAGTGAGCCCTTGTCCCTTTCTATGAGACCAAGTCTC690.1026419136022849No Hit
CATAGAACCCAAAGAGTGAGCAGCAGACATGGTTCTACACATAGAACCCA680.10115434963703439No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)