FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807584

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807584
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences67224
Sequences flagged as poor quality0
Sequence length150
%GC48

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA2942543.77156967749613No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGT27134.0357610377246225No Hit
CATAGAAAGGGACAAGGGCTCACTCTAGCCTGGGAGACATCTATGTGTAG22833.3961085326669047No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGTGTAGAACCATG13241.9695346899916695No Hit
CATAGAACAATCAGGCACCCACCATGCTGAAGTCCCATGATCTATGTGTA8991.3373200047602047No Hit
CATAGAGGCGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA8251.2272402713316672No Hit
CATAGATGCCAAGAAGAGAAAAGCAGCTCTATGTGTAGAACCATGTCGTC7711.14691181720814No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAATTCTCTATGTG6240.9282399143163157No Hit
CATAGAACCAACCCTGATTCTGCTGCTCACTCTTTGGGTTCTATGTGTAG5250.7809710817565155No Hit
CATAGATGTTGTTGTTCTGTTGCCCAATATGAACAGAAAGAAGCTCTATG4710.7006426276329882No Hit
CATAGATGAAAGAGCATTGGTTGTAACACCGAAAAACACCCTCTATGTGT4120.6128763536832084No Hit
CATAGATCTCAAACAGCCTCTCCCAGGAAAGTTGGAACCTATCAGTGTCT3710.5518862311079376No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTGTGTGGCCAACAGGAAGGTCTA3670.5459359752469356No Hit
CATAGATGTTGTTGTTCTGTTCCCCAATATGAACAGAAAGAAGCTCTATG3450.5132095680114245No Hit
CATAGAGCCATCATCATTTCTCACCCAGGAAAGTTGGAACCTATCAGTGT3380.502796620254671No Hit
CATAGAGCCATCATCATTTCTCACCCAGGGTAATTCTGGCCTTGTTCTAT3360.49982149232416995No Hit
CATAGACGGGAAGAGTAAGACCACCCCAGCTCCACAGGGACAGAGGCTCT3330.4953588004284184No Hit
CATAGAAAGGGACAAGGGCTCACTCTGCTGCTCACTCTTTGGGTTCTATG3290.48940854456741634No Hit
CATAGATGGTAAGATGACATAGTGAAGAGTCTACGGTAGCAGAAGCTTTG3060.45519457336665475No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAAATTCTCTTGACA2850.4239557300963942No Hit
CATAGATGCCAAGAAGAGAAAAGCAGCCATTGTCGCCTTCTCTTCTCTAT2800.4165179102701417No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAGGAAAGTTGGAACCTATC2800.4165179102701417No Hit
CATAGATGTTGTTGTTCTGTTGCCCATGTCGTCAGTGTCAGGAAAGTTGG2730.4061049625133881No Hit
CATAGACTCACTCTGTCACCCAAGCTCACTGACACAGGGTAATTCTGGCC2560.38081637510412947No Hit
CATAGATGAAAGAGCATTGGTTGTGACACCGAAAAACACCCTCTATGTGT2450.3644531714863739No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGTAGTATGCAGTCTGTGAGCTGTC2300.34213971200761634No Hit
CATAGATGCCAAGAAGAGAAAAGCAGCTACGGTAGCAGAGGCAAGGGTAC2250.33470189218136376No Hit
CATAGATCTCAAACAGCCTCTCCCAGGGTAATTCTGGCCTTGTTCTATGT2140.31833868856360825No Hit
CATAGATGCCAAGAAGAGAAAAGCAGCCTCTATGTGTAGAACCATGTCGT2070.3079257408068547No Hit
CATAGATGGTAAGATGACATAGTGAAGAGTCAGTGTAGAAGCTTTGAGAT1920.28561228132809713No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTGTCTCATAGAGGCAAGGGT1870.2781744615018446No Hit
CATAGATGGTAAGATGACATAGTGAAGAGTCATGTCGTCAGTGTAGTATG1870.2781744615018446No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA1750.26032369391883853No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTACCAAAAGCACAAG1710.2543734380578365No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACATTTATCGGGAGCCACAGA1710.2543734380578365No Hit
CATAGATAGCAGCAATCTCAGGCCTGGGAGACCCCATATCTACCAAAGAT1670.24842318219683446No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA1620.2409853623705819No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG1580.2350351065095799No Hit
CATAGAAAGGGACAAGGGCTCACTCTCTGCTGCTCACTCTTTGGGTTCTA1560.23205997857907892No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA1520.22610972271807686No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTGCTGCTCACTCTTTG1490.22164703082232537No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA1490.22164703082232537No Hit
CATAGATCCCTGGCAAGAATTCCTCAGTGTAGAAGCTTTGAGATTTGTGT1460.21718433892657382No Hit
CATAGATCTCAAACAGCCTCTCCCAGTTCTACACATAGAGGGCCAGAAGC1450.21569677496132336No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA1390.20677139116982032No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAAATTCTCTTGAC1370.2037962632393193No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA1350.20082113530881826No Hit
CATAGATGAAAGAGCATTGGTTGTAACACTACGGAGACCCCATATCTACC1280.19040818755206473No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGTATGCAGTCTGT1260.18743305962156373No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTACACTGAAACATTTTCTGGTCA1190.17702011186481018No Hit
CATAGAGGTGAGCGGCTGTCTCCAGGAAAGTTGGAACCTATCAGTGTCTA1180.17553254789955966No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA1180.17553254789955966No Hit
CATAGACTCACTCTGTCACCCAAGCTACGGTAGCAGAGGCAAGGGTACTA1170.17404498393430917No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTACTATGGCTTAATG1120.16660716410805665No Hit
CATAGAAAGGGACAAGGGCGCACTCTAGCCTGGGAGACATCTATGTGTAG1120.16660716410805665No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTGCGTGCCATACCAAGAATAAGA1080.16065690824705461No Hit
CATAGATCCAGCTTCATCCATGTCCCTGCAAAGGACATGAACTCATCCTT1080.16065690824705461No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGGGCCTTCAGGTCA1060.1576817803165536No Hit
CATAGAGGTGAGCGGCTGTCCCCACAAGTCCGCGCAGAGCCTTCAGGTCA1020.15173152445555158No Hit
CATAGAGATCTTCTCGGCTTAGCGGCCATTGTCGCCTTCTCTTCTCTATG1010.1502439604903011No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGCCCGCGCAGAGCCTTCAGGTCA990.14726883255980008No Hit
CATAGATGAAAGAGCATTGGTTGTAACACCATGTCGTCAGTGTCAGGAAA970.14429370462929905No Hit
CATAGATCCAGCTTCATCCATGTCCCTGCAAAGGACAGGTTGACCCTTAT960.14280614066404856No Hit
CGTAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA960.14280614066404856No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAGTGTGAGGTTTCCTGGGCAT960.14280614066404856No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTCAGGAAAGTTGGAA950.14131857669879805No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGAGGTAAACAAACTTC940.13983101273354753No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA930.13834344876829704No Hit
CATAGATGCCAAGAAGAGAAAAGCAGCAGGAAAGTTGGAACCTATCAGTG870.129418064976794No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGCGCCTTCAGGTCA830.12346780911579198No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAAACATTTTCTGGTCAGCTGT830.12346780911579198No Hit
CATAGATCTAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGT830.12346780911579198No Hit
AATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA810.12049268118529095No Hit
CATAGATGCCAAGAAGAGAAAAGCAGGAAAGTTGGAACCTATCAGTGTCT790.11751755325478995No Hit
CATAGAACAATCAGGCACCCACCATGTACGGAGGCTGAAACTCTAAGGGT780.11602998928953946No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTTA760.11305486135903843No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGTGTAGAACTGCT750.11156729739378794No Hit
CATAGAGATCTTCTCGGCTTAGCGGCTGTCTCCACAAGTCCGCGCAGAGC750.11156729739378794No Hit
CATAGGGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA720.10710460549803642No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGTAGAAGCTTTGAGATTTGTGTCT700.10412947756753542No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)