FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807585

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807585
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences153947
Sequences flagged as poor quality0
Sequence length150
%GC37

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGACGCGGTATTGTCAGGAGCTAACTGGGATACTGCTCTATGAGACC111117.217418981857393No Hit
CATAGATTACTGGGAGACTGGCGCTCACCTCTATGAGACCAAGTCTCTGC79115.138781528707932No Hit
CATAGACCTGGTACTTCTCTTCTGGGTCCATTTTTGGTTCTCTTCTATGA77745.049789862744971No Hit
CATAGAACTGAGGCTGGTAGAGGGAGGCGTGGTATGAGGGGAATCTATGA75604.9107809830656No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGGCCCATAATACACTTTTCTAT43372.8172033232216283No Hit
CATAGAGGGAAGAGAAGAGGAGCTGACATCCCAACCACACGTCTATGAGA41902.7217159152175747No Hit
CATAGACAGTCCTGCCGTGTACATGTACAGCCTACATCCCTCATCTATGA41022.6645533852559646No Hit
CATAGATGTCCCCATTCATCCTGCAAACAGAATGGGACCCATCTATGAGA39222.5476300285163074No Hit
CATAGAAAAGTCACCATGCAGCCCTGTGATTGTCCTTGCACACCATGGAT31442.042261297719345No Hit
CATAGATTACTGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGCT31162.0240732200042872No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGAGGAACAGGGAGATGTTCTATG27051.7570982221154035No Hit
CATAGACGCGGTATTGTCAGGAGCTGACTGGGATACTGCTCTATGAGACC20751.3478664735266033No Hit
CATAGAACTTGTGCTTTTGGTGTCACCCGTAATCCCTCCCTTTTCTATGA19881.2913535177691025No Hit
CATAGACAGTATGGGGGAAACGGCTCTCTTCCGCCTTTATCCTTCTATGA19461.2640714011965157No Hit
CATAGAAAAGTCACCATGCAGCCCTGGCAAAAGGGTAAGAGTTCTATGAG18881.2263960973581818No Hit
CATAGAAAAGTCACCATGCAGCCCTGGGCCCATAATACACTTTTCTATGA18391.1945669613568306No Hit
CATAGAGCACCCAACTATCCTTCAGCATGAGAAGAATGGCCTCTATGAGA17041.1068744438020877No Hit
CATAGATCATGAATGACTCCCACTCTGGTGGTGCTGGAACTAGTTCTATG16211.0529597848610235No Hit
CATAGAGGCAAGCTAACTCTGAGATCCATCAGAGCATCACCCCTTCTATG16051.0425665975952763No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTCCTGGGCCCATAATACACTTTTC15461.004241719552833No Hit
CATAGATCATGAATGACTCCCACTCTGTAGATTATGCTCTCTTCCGCCTT15330.9957972548994134No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTAC13530.8788738981597563No Hit
CATAGATTACTGGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGC12810.8321045554638935No Hit
CATAGAATCCCTGCCCTTGACCTTGGGGGAAGAGAAACAGAATCTATGAG12410.8061215872995251No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTGAGGTTCTTCAACACAGCTA11480.745711186317369No Hit
CATAGAATTCCCCAATGTCCTGTGCAAACAGAATGGGACCCATCTATGAG10810.7021897146420522No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCCTTGTCCTTGCACACCATGGAT9890.6424288878640052No Hit
CATAGACTTTCTGAAATTGTTTGCTGCTTTGGGGGAAGAGAAACAGAATC9790.6359331458229132No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTATGGTGAAAAGTAGGGGACAGTT9330.6060527324338896No Hit
CATAGACCCCCATGCAACCACATCTACACTGACGACATGGTTCTACACAT9290.6034544356174527No Hit
CATAGATGTGTGAGAGAGGGAGAGACAGCCTTCTCTGATACCATCCCTCT9160.5950099709640331No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGTGGTGCTGGAACTAGTTCTATG8570.5566850929215899No Hit
CATAGAATCCCTGCCCTTGTCCTTGCACACCATGGATCTATGAGACCAAG7750.503420008184635No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGTAAGAGTTCTATGA7730.5021208597764165No Hit
CATAGACGCGGTATTGTCAGGAGCTGACATCCCAACCACACGTCTATGAG7620.49497554353121526No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCGTGTACAGCCTACATCCCTCAT7350.4774370400202667No Hit
CATAGATGCACCAGAAGCCACCTACCCCTTTACCTACCTTCTCAGCTCTA7340.4767874658161575No Hit
CATAGAGACCCCCAAGTAGCCTAACTGAGGTTCTTCAACACAGCTATTCT7320.4754883174079391No Hit
CATAGAACCCTGCTTCCTAAATCAACAATGGGCACACTTAACACCTCTAT7290.4735395947956115No Hit
CATAGAGCATCCTCGTAATAGCAAACATTTGGGGGAAGAGAAACAGAATC7170.46574470434630105No Hit
CATAGAATCCCTGCCCTTGACCTTGGTGAAAAGTAGGGGACAGTTCTATG6970.45275322026411685No Hit
CATAGATTACTGGGAGACTGGCGCTCTCTTCCGCCTTTATCCTTCTATGA6850.4449583298148064No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGCAAGTGTATGGTCA6760.43911216197782355No Hit
CATAGATGGCATGTCACTTCCTCAGAGCATCACCCCTTCATTTTGCTGGA6740.43781301356960517No Hit
CATAGAATCCCTGCCCTTGACCTTGGGAGGAACAGGGAGATGTTCTATGA6500.42222323267098416No Hit
CATAGAGCAGTGCAGCAGAAGATAGCCTTCTCTGATACCATCCCTCTATG6360.4131291938134553No Hit
CATAGAATTGCCTACTTTGGGACCCATGCAAACAGAATGGGACCCATCTA5990.38909494826141466No Hit
CATAGAACTTTCAGTAATAGGGGACAAGAACAAGGGCATGGTCAAGTGTC5910.383898354628541No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAGCATGAGAAGAATGGCCTCTAT5900.3832487804244318No Hit
CATAGACCCCCATGCAACCACATCTATACAATGGGCACACTTAACACCTC5810.37740261258744895No Hit
CATAGAAAAGTCACCATGCAGCCCTGGTGGTGCTGGAACTAGTTCTATGA5800.37675303838333973No Hit
CATAGAACTTGTGCTTTTGGTGTCACTTGATCATCCATTGTCTGCTCTAT5600.3637615543011556No Hit
CATAGACCCACTTACACACACAGGTTTTCCGGCTTGAGGTTCTATGAGAC5570.361812831688828No Hit
CATAGATGCACCAGAAGCCACCTACCAAGTATATGACACATTACACCAGT5570.361812831688828No Hit
CATAGAGTCATTCCAAACTGTGCACTTGTCCTTGCACACCATGGATCTAT5300.3442743281778794No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGCAAACAGAATGGGACCCA5260.3416760313614426No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTATAGATTATGCTCTCTTCCGCCT5120.3325819925039137No Hit
CATAGACCCACTTACACACACAGGTTTGGGGGAAGAGAAACAGAATCTAT5060.32868454727925844No Hit
CATAGACAGAACACCACACCCCTGTCCTTGTCCTTGCACACCATGGATCT5000.3247871020546032No Hit
CATAGAGAAAGGCAGGCGAAGTTAGCTCTCTTCCGCCTTTATCCTTCTAT4870.3163426374011835No Hit
CATAGACAGAACACCACACCCCTGTCCTTGCACACCATGGATCTATGAGA4770.30984689536009147No Hit
CATAGATCATGGGACTTCAGCATGGCTCTCTTCCGCCTTTATCCTTCTAT4610.29945370809434413No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCAAACAGAATGGGACCCATCTAT4310.279966481971068No Hit
CATAGAGAAAGGCAGGCGAAGTTAGCCTTCTCTGATACCATCCCTCTATG4280.27801775935874035No Hit
CATAGAATCACTTGAGTTTGTAAAAGCAGAGGAATTAGAGCCAGTTCTGA4240.27541946254230354No Hit
CATAGAGGCAAGCTAACTCTGAGATCCATCGGCCGCACTGAAATTGTCTA4230.27476988833819427No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCCTGGGCCCATAATACACTTTTCTA4190.2721715915217575No Hit
CATAGACCATGTAATACCATCGTGAGCAGTTTGGGGGAAGAGAAACAGAA4180.27152201731764825No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTATGAGGTTCTTCAACACAGC3930.25528266221491813No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG3910.2539835138066997No Hit
CATAGATCATGAATGACTCCCACTCTGAGGTTCTTCAACACAGCTATTCT3830.24878692017382603No Hit
CATAGACAGTCCTGCCGTGTACATGTTTTGGGGGAAGAGAAACAGAATCT3690.23969288131629718No Hit
CATAGACCCCCATGCAACCACATCTATGAACAATGGGCACACTTAACACC3610.23449628768342354No Hit
CATAGAATTGCCTACTTTGGGACCCACTTTGTTCCCTGGCTTCTCTATGA3580.23254756507109592No Hit
CATAGAATTGCCTACTTTGGGACCCAGCATGAGAAGAATGGCCTCTATGA3550.23059884245876827No Hit
CATAGAACTGAGGCTGGTAGAGGGAGCCTTGGAGGCCTAGCCTGGCAGCT3540.22994926825465906No Hit
CATAGAGGTTCTTTGTAGACTTACCTGGCAAAAGGGTAAGAGTTCTATGA3480.22605182303000382No Hit
CATAGAATCCCTGCCCTTGACCTTGGTCTGTCATAAAACAATGGGCACAC3450.22410310041767623No Hit
CATAGACCATGTAATACCATCGTGAGCAGTGTGTACAGCCTACATCCCTC3440.223453526213567No Hit
CATAGACCCCCATGCAACCACATCTATGCCCCTTCATTTTGCTGGAACTC3290.2137099131519289No Hit
CATAGAATCACTTGAGTTTGTAAAAGCAGAGGAAAATGTCAGTGGGCCAT3150.20461587429440004No Hit
CATAGACCCACTTACACACACAGGTTTTCCGGCTTGAGGTTCTTCAACAC3090.2007184290697448No Hit
CATAGAATCCCTGCCCTTGACCTTGCACACCATGGATCTATGAGACCAAG2950.1916243902122159No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGGCTGACATCCCAACCACACGTC2950.1916243902122159No Hit
CATAGAGGCAAGCTAACTCTGAGATCCACCCGTAATCCCTCCCTTTTCTA2950.1916243902122159No Hit
CATAGATGCACCAGAAGCCACCTACCTTCCCCCTTTACCTACCTTCTCAG2930.19032524180399749No Hit
CATAGACCATGTAATACCATCGTGAGCAGCACCCCTTCATTTTGCTGGAA2920.18967566759988827No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTGGTGAAAAGTAGGGGACAGTTCT2880.18707737078345146No Hit
CATAGAATCCCTGCCCTTGACCTTGGGTCCATTTTTGGTTCTCTTCTATG2790.18123120294646858No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTGCAAACAGA2760.17928248033414096No Hit
CATAGAACTTGTGCTTTTGGTGTCACAAGCACATTATTATTGGTTGGTTC2760.17928248033414096No Hit
CATAGATGCACCAGAAGCCACCTACCGTACCTGGCAAAAGGGTAAGAGTT2700.17538503510948572No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGTCCATTTTTGGTTCTCTTCTAT2700.17538503510948572No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGACCAAGTCTCTGCTACC2690.17473546090537653No Hit
CATAGAATTGCCTACTTTGGGACCCATCGGCCGCACTGAAATTGTCTATG2530.16434227363962922No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCAAA2500.1623935510273016No Hit
CATAGAGCATCCTCGTAATAGCAAACATTTGCCAAGATTGTAGGAGTAGA2480.16109440261908317No Hit
CATAGATTGCCTCATTGTGCCAGACAACACTGATCTAGCTTCGGAATGTT2460.1597952542108648No Hit
CATAGACAGTCCTGCCGTGTACATGTACAAACCAAACAATAGCCAGTCTA2350.1526499379656635No Hit
CATAGAATTCCCCAATGTCCTGTGCACACCATGGATCTATGAGACCAAGT2340.15200036376155432No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTGC2270.14745334433278987No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACTGCAAACAGAATGG2240.14550462172046225No Hit
CATAGAATTGCCTACTTTGGGACCCATCTGCAAACAGAATGGGACCCATC2230.14485504751635303No Hit
CATAGACAGTCCTGCCGTGTACATGTGTACAGCCTACATCCCTCATCTAT2220.14420547331224384No Hit
CATAGAATTCCCCAATGTCCTGTGCACACTTGTCCTTGCACACCATGGAT2180.141607176495807No Hit
CATAGAATCCCTGCCCTTGACCTTGGTTCTACACCCGTAATCCCTCCCTT2160.14030802808758858No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCACCCGTAATCCCTCCCTTTTC2150.1396584538834794No Hit
CATAGAACCCTGCTTCCTAAATCAACAAGCACATTATTATTGGTTGGTTC2150.1396584538834794No Hit
CATAGATCATGGGACTTCAGCATGGCAAAAGGGCAAGTGTATGGTCAGTT2130.13835930547526096No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAGAACAAGGGCATGGTCAAG2070.13446186025060572No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAACACTGACGACAAGGTTTTC2070.13446186025060572No Hit
CATAGAATTGCCTACTTTGGGACCCAAGTATATGACACATTACACCAGTC2050.13316271184238732No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCAAGTATATGACACATTACACC2020.1312139892300597No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTGCAAACA2020.1312139892300597No Hit
CATAGATCATGAATGACTCCCACTCTGTTCCCTGGCAAAAGGGTAAGAGT1850.12017122776020318No Hit
CATAGACCCACTTACACACACAGGTTTACACTGACGACAATGGGCACACT1820.11822250514787555No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGTGAAAAGTAGGGGACAGTTCT1790.11627378253554796No Hit
CATAGACCATGTAATACCATCGTGAGCAGTGTAGGAATTAGAGCCAGTTC1750.11367548571911112No Hit
CATAGAATCACTTGAGTTTGTAAAAGCAGAGCCTTCTCTGATACCATCCC1710.1110771889026743No Hit
CATAGATGTCCCCATTCATCCTGCAACAGGGCAAGTGTATGGTCAGTTCT1690.10977804049445589No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCCTGTGATTGTCCTGGTCTATGA1650.10717974367801905No Hit
CATAGATCATGGGACTTCAGCATGGCTTTGGGGGAAGAGAAACAGAATCT1620.10523102106569143No Hit
CATAGAAGGGCAATTATCTCATCCTAGACGAAGGGCAAGTGTATGGTCAG1620.10523102106569143No Hit
CATAGACAGAACACCACACCCCTGTCGTGTACAGCCTACATCCCTCATCT1610.10458144686158223No Hit
CATAGACAGTCCTGCCGTGTACATGTGCCCTGTGATTGTCCTGGTCTATG1600.10393187265747303No Hit
CATAGACAGAACACCACACCCCTGTCTTAGGAGTTCTGGCCCCTGTCTAT1570.10198315004514541No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGGAGGAACAGGGAGATGTTCTA1550.100684001636927No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)