FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807586

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807586
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences153947
Sequences flagged as poor quality0
Sequence length150
%GC35

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCAGTATCCCAGTTAGCTCCTGACAATACCGCGTCTATGTGTAG115937.53051374823803No Hit
CATAGAGGTGAGCGCCAGTCTCCCAGTAATCTATGTGTAGAACCATGTCG78345.088764314991523No Hit
CATAGAAGAGAACCAAAAATGGACCCAGAAGAGAAGTACCAGGTCTATGT77945.062781346827155No Hit
CATAGATTCCCCTCATACCACGCCTCCCTCTACCAGCCTCAGTTCTATGT77485.032900933438132No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGTTGACAAACGACAGCTTCTAT42732.7756305741586393No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTCTTCTCTTCCCTCTATGTGT40872.6548097721943265No Hit
CATAGATGAGGGATGTAGGCTGTACATGTACACGGCAGGACTGTCTATGT40492.630125952438177No Hit
CATAGATGGGTCCCATTCTGTTTGCAGGATGAATGGGGACATCTATGTGT39442.56192066100671No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTAATCTATGTGTAGAACCATGTCGT37562.439800710634179No Hit
CATAGATCCATGGTGTGCAAGGACAATCACAGGGCTGCATGGTGACTTTT31212.027321091024833No Hit
CATAGAACATCTCCCTGTTCCTCCCACCTAAACTCCTGAGATCCTCTATG27281.7720384288099151No Hit
CATAGAGCAGTATCCCAGTCAGCTCCTGACAATACCGCGTCTATGTGTAG20931.359558809200569No Hit
CATAGAAAAGGGAGGGATTACGGGTGACACCAAAAGCACAAGTTCTATGT19531.2686184206252802No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCCGTTTCCCCCATACTGTCTATGT19271.251729491318441No Hit
CATAGAACTCTTACCCTTTTGCCAGGGCTGCATGGTGACTTTTCTATGTG19161.2445841750732396No Hit
CATAGAAAAGTGTATTATGGGCCCAGGGCTGCATGGTGACTTTTCTATGT18351.1919686645403937No Hit
CATAGAGGCCATTCTTCTCATGCTGAAGGATAGTTGGGTGCTCTATGTGT17081.1094727406185245No Hit
CATAGAACTAGTTCCAGCACCACCAGAGTGGGAGTCATTCATGATCTATG16241.0549085074733513No Hit
CATAGAAGGGGTGATGCTCTGATGGATCTCAGAGTTAGCTTGCCTCTATG15771.0243785198802184No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGGAGTTGACAAACGACAGCTTC15230.9893015128583214No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTACAGAGTGGGAGTCAT15030.9763100287761373No Hit
CATAGAGGTGAGCGGCTGTCTCCCAGTAATCTATGTGTAGAACCATGTCG14760.9587715252651887No Hit
CATAGATTCTGTTTCTCTTCCCCCAAGGTCAAGGGCAGGGATTCTATGTG12320.8002754194625422No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAAGAAAGAAAACCCACAAAAGAC11680.7587026703995531No Hit
CATAGATGGGTCCCATTCTGTTTGCACAGGACATTGGGGAATTCTATGTG10890.7073863082749258No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGCTGCATGGTGACTTTT9900.6430784620681144No Hit
CATAGATTCTGTTTCTCTTCCCCCAAAGCAGCAAACAATTTCAGAAAGTC9830.6385314426393499No Hit
CATAGAACTGTCCCCTACTTTTCACCATAGAACTTTCCCACCGCCCTTTT9510.6177450681078553No Hit
CATAGAGGGATGGTATCAGAGAAGGCTGTCTCTCCCTCTCTCACACATCT9260.6015057130051251No Hit
CATAGATGGGTCCCAAAGTAGGCAATTCTATGTGTAGAACCATGTCGTCA9160.5950099709640331No Hit
CATAGAACTAGTTCCAGCACCACCAGTTAGGCTACTTGGGGGTCTCTATG8640.5612321123503543No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGATTCTATGTGTAGAAC7970.5177106406750376No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTGACAATACCGCGTCTATGTG7870.5112148986339454No Hit
CATAGAACTCTTACCCTTTTGCCAAGTAAGTCTACAAAGAACCTCTATGT7630.49562511773532447No Hit
CATAGAGCTGAGAAGGTAGGTAAAGGGGTAGGTGGCTTCTGGTGCATCTA7220.4689925753668471No Hit
CATAGATGAGGGATGTAGGCTGTACACGGCAGGGCTGCATGGTGACTTTT7100.46119768491753654No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAGTTAGGCTACTTGGGGGTCTCT7090.46054811071342733No Hit
CATAGAACTGTCCCCTACTTTTCACCAAGGTCAAGGGCAGGGATTCTATG7080.4598985365093181No Hit
CATAGATTCTGTTTCTCTTCCCCCAAATGTTTGCTATTACGAGGATGCTC7010.45535151708055366No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTTGATTTAGGAAGCAGGGTTCTAT6990.4540523686723353No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCAAGTAAGTCTACAAAGAA6900.44820620083535245No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCGCCAGTCTCCCAGTAATCTATGT6890.44755662663124324No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGATGCTCTGAGGAAGTGACATGC6650.43196684573262223No Hit
CATAGAACATCTCCCTGTTCCTCCCAAGGTCAAGGGCAGGGATTCTATGT6620.4300181231202947No Hit
CATAGAGGGATGGTATCAGAGAAGGCTATCTTCTGCTGCACTGCTCTATG6600.4287189747120762No Hit
CATAGAGGCCATTCTTCTCATGCTGGATCTCAGAGTTAGCTTGCCTCTAT6070.3942915418942883No Hit
CATAGATGGGTCCCATTCTGTTTGCATGGGTCCCAAAGTAGGCAATTCTA5940.38584707724086864No Hit
CATAGACACTTGACCATGCCCTTGTTCTTGTCCCCTATTACTGAAAGTTC5880.38194963201621335No Hit
CATAGAACTAGTTCCAGCACCACCAGGGCTGCATGGTGACTTTTCTATGT5860.38065048360799497No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTATAGATGTGGTTGCATGGGGGTC5680.3689581479340292No Hit
CATAGAGCAGACAATGGATGATCAAGTGACACCAAAAGCACAAGTTCTAT5660.3676589995258108No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTAGGTGGCTTCTGGTGCAT5620.365060702709374No Hit
CATAGAACCTCAAGCCGGAAAACCTGTGTGTGTAAGTGGGTCTATGTGTA5520.3585649606682819No Hit
CATAGATGGGTCCCATTCTGTTTGCATAGATGGGTCCCAAAGTAGGCAAT5290.3436247539737702No Hit
CATAGATCCATGGTGTGCAAGGACAAGTGCACAGTTTGGAATGACTCTAT5270.3423256055655518No Hit
CATAGATTCTGTTTCTCTTCCCCCAAACCTGTGTGTGTAAGTGGGTCTAT5040.32738539887104No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTATAGGAGTTGACAAAC5000.3247871020546032No Hit
CATAGATCCATGGTGTGCAAGGACAAGGACAGGGGTGTGGTGTTCTGTCT4930.32024008262583875No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCTAACTTCGCCTGCCTTTCTCTAT4780.3104964695642007No Hit
CATAGATCCATGGTGTGCAAGGACAGGGGTGTGGTGTTCTGTCTATGTGT4690.3046503017272178No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCCATGCTGAAGTCCCATGATCTAT4390.28516307560394166No Hit
CATAGAGGGATGGTATCAGAGAAGGCTAACTTCGCCTGCCTTTCTCTATG4360.283214352991614No Hit
CATAGATTCTGTTTCTCTTCCCCCAAACTGCTCACGATGGTATTACATGG4300.2793169077669588No Hit
CATAGATGGGTCCCATTCTGTTTGCATTCTTTCTCCAGACCTTCATCTAT4250.27606903674641275No Hit
CATAGACAATTTCAGTGCGGCCGATGGATCTCAGAGTTAGCTTGCCTCTA4140.26892372050121144No Hit
CATAGAAAAGTGTATTATGGGCCCAGGCAGCTCCTCTTCTCTTCCCTCTA4140.26892372050121144No Hit
CATAGACTCAGAACTGGCTCTAATTCCTCTGCTTTTACAAACTCAAGTGA4120.26762457209299306No Hit
CATAGAATAGCTGTGTTGAAGAACCTCATACGGTTGCAGGATGAATGGGG3990.2591801074395733No Hit
CATAGATTCTGTTTCTCTTCCCCCAAAACATGTACACGGCAGGACTGTCT3720.24164160392862477No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAGAGTGGGAGTCATTCATGATCT3680.23904330711218796No Hit
CATAGAACTAGTTCCAGCACCACCAGCTGCCAGGCTAGGCCTCCAAGGCT3620.23514586188753273No Hit
CATAGAGAAGCCAGGGAACAAAGTGGGTCCCAAAGTAGGCAATTCTATGT3620.23514586188753273No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA3610.23449628768342354No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTTCATAGATGTGGTTGCATGGGGG3590.23319713927520508No Hit
CATAGAGGCCATTCTTCTCATGCTGGGTCCCAAAGTAGGCAATTCTATGT3560.23124841666287746No Hit
CATAGAACTCTTACCCTTTTGCCAGGTAAGTCTACAAAGAACCTCTATGT3540.22994926825465906No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTTTTATGACAGACCAAGGTCAAGG3430.2228039520094578No Hit
CATAGATGAGGGATGTAGGCTGTACACACTGCTCACGATGGTATTACATG3420.2221543778053486No Hit
CATAGAGTTCCAGCAAAATGAAGGGGCATAGATGTGGTTGCATGGGGGTC3240.21046204213138286No Hit
CATAGATGGCCCACTGACATTTTCCTCTGCTTTTACAAACTCAAGTGATT3140.20396630009029082No Hit
CATAGACGTGTGGTTGGGATGTCAGCCCAGTTAGGCTACTTGGGGGTCTC3000.19487226123276194No Hit
CATAGAAAAGGGAGGGATTACGGGTGGATCTCAGAGTTAGCTTGCCTCTA2970.19292353862043432No Hit
CATAGAACTGTCCCCTACTTTTCACCAGAACTTTCCCACCGCCCTTTTCT2950.1916243902122159No Hit
CATAGAGCTGAGAAGGTAGGTAAAGGGGGAAGGTAGGTGGCTTCTGGTGC2950.1916243902122159No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAAGCCGGAAAACCTGTGTGTGTA2930.19032524180399749No Hit
CATAGATCCATGGTGTGCAAGGTCAAGGGCAGGGATTCTATGTGTAGAAC2890.18772694498756065No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGCTGCTCACGATGGTATTACATG2880.18707737078345146No Hit
CATAGAAGAGAACCAAAAATGGACCCACCTAAACTCCTGAGATCCTCTAT2810.182530351354687No Hit
CATAGAACCAACCAATAATAATGTGCTTGTGACACCAAAAGCACAAGTTC2770.17993205453825017No Hit
CATAGAAGAGAACCAAAAATGGACCCAAGGTCAAGGGCAGGGATTCTATG2740.17798333192592256No Hit
CATAGATGGGTCCCATTCTGTTTGCACTTGGTCTCATAGATGGGTCCCAA2690.17473546090537653No Hit
CATAGAACTCTTACCCTTTTGCCAGGTACGGTAGGTGGCTTCTGGTGCAT2570.16694057045606606No Hit
CATAGATGAAAACATTCCGAAGCTAGATCAGTGTTGTCTGGCACAATGAG2550.16564142204784763No Hit
CATAGATCTACTCCTACAATCTTGGCAAATGTTTGCTATTACGAGGATGC2540.16499184784373844No Hit
CATAGATGGGTCCCATTCTGTTTGCAGAGACTTGGTCTCATAGATGGGTC2450.15914568000675558No Hit
CATAGACAATTTCAGTGCGGCCGATGGGTCCCAAAGTAGGCAATTCTATG2440.15849610580264636No Hit
CATAGATGGGTCCCATTCTGTTTGCAGTCTCATAGATGGGTCCCAAAGTA2350.1526499379656635No Hit
CATAGACTGGCTATTGTTTGGTTTGTACATGTACACGGCAGGACTGTCTA2250.14615419592457143No Hit
CATAGATGGGTCCCATTCTGTTTGCAGCAGAGACTTGGTCTCATAGATGG2210.1435558991081346No Hit
CATAGATCCATGGTGTGCAAGGACAAGTGTGCACAGGACATTGGGGAATT2200.1429063249040254No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCATGCTGAAGTCCCATGAT2190.1422567506999162No Hit
CATAGATGAGGGATGTAGGCTGTACACATGTACACGGCAGGACTGTCTAT2170.1409576022916978No Hit
CATAGATGGGTCCCATTCTGTTTGCAGATGGGTCCCAAAGTAGGCAATTC2160.14030802808758858No Hit
CATAGAACCAACCAATAATAATGTGCTTGTTGATTTAGGAAGCAGGGTTC2160.14030802808758858No Hit
CATAGATTCCCCTCATACCACGCCTCAGTTCTATGTGTAGAACCATGTCG2090.13576100865882412No Hit
CATAGAAAAGGGAGGGATTACGGGTGTAGAACCAAGGTCAAGGGCAGGGA2080.13511143445471493No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGGTAGAATCTTGAACTCAGG2080.13511143445471493No Hit
CATAGAACCTCAAGCCGGAAAACCTTGTCGTCAGTGTTGCCAAGTAAGTC2040.1325131376382781No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGGTCCCAAAGTAGGCAATTC2040.1325131376382781No Hit
CATAGACACTTGACCATGCCCTTGTTCTACGGTTGCAGGATGAATGGGGA2030.1318635634341689No Hit
CATAGATGGGTCCCATTCTGTTTGCAGACTTGGTCTCATAGATGGGTCCC2020.1312139892300597No Hit
CATAGAAAAGGGAGGGATTACGGGTGGGTAGAATCTTGAACTCAGGAGTC2020.1312139892300597No Hit
CATAGAACTCTTACCCTTTTGCCAGGGAACAGAGTGGGAGTCATTCATGA1840.11952165355609398No Hit
CATAGAACTGTCCCCTACTTTTCACCAGGAGTTGACAAACGACAGCTTCT1800.11692335673965716No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCGTCAGTGTAAACCTGTGTGTGT1780.11562420833143873No Hit
CATAGACTCAGAACTGGCTCTAATTCCTACACTGCTCACGATGGTATTAC1770.11497463412732953No Hit
CATAGAGGGATGGTATCAGAGAAGGCTCTGCTTTTACAAACTCAAGTGAT1740.11302591151500191No Hit
CATAGAACTGACCATACACTTGCCCTGTTGCAGGATGAATGGGGACATCT1710.1110771889026743No Hit
CATAGATTCTGTTTCTCTTCCCCCAAAGCCATGCTGAAGTCCCATGATCT1700.11042761469856509No Hit
CATAGACCAGGACAATCACAGGGCAGGGCTGCATGGTGACTTTTCTATGT1670.10847889208623748No Hit
CATAGAACTGACCATACACTTGCCCTTCGTCTAGGATGAGATAATTGCCC1660.10782931788212825No Hit
CATAGACCAGGACAATCACAGGGCACATGTACACGGCAGGACTGTCTATG1630.10588059526980065No Hit
CATAGATGAGGGATGTAGGCTGTACACGACAGGGGTGTGGTGTTCTGTCT1600.10393187265747303No Hit
CATAGACAGGGGCCAGAACTCCTAAGACAGGGGTGTGGTGTTCTGTCTAT1570.10198315004514541No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)