FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807599

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807599
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences50921
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG1328726.093360303214787No Hit
CATAGAGAGATTTTGGGCTGAGACGATAATGCCGCATATCTACAACTATC21604.241864849472712No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAATCA12592.4724573358732154No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACACTCA12452.4449637674044107No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAACCTGTCTCTACT10892.1386068616091594No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAACAA10412.0443431982875437No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCATCTCTA10402.042379371968343No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCGTCTCTA7951.5612419237642623No Hit
CATAGAGCCAAGGAAAGTTGAATGGAGACAGCCGCTCACCTCTATGAGAC6831.3412933760138253No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCTGTCTCTA5521.084032128198582No Hit
CATAGACACCATGCCTGGCTAATTTTTTGCGTTTTTAGTAGAGATGGGGT4860.9544195911313603No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC4750.9328175016201568No Hit
CATAGATGTCCATCATGTGGAAGCTGGAGAGTCACTTCTTTTGATAATTC4040.7933858329569332No Hit
CATAGACCTGGGCTTAGGGGCTATACATGGCTATGCAATCTATGAGACCA2990.5871840694408986No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGATAGGGTT2900.5695096325680956No Hit
CATAGACCTGGGCTTAGGGGCTACACATGGCTATGCAATCTATGAGACCA2800.5498713693760924No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTCTCTAAATATACACTCA2750.5400522377800907No Hit
CATAGACCTTTGGGTTCATATCATCTGGAGACAGCCGCTCACCTCTATGA2430.47720979556568016No Hit
CATAGAAACCCCAAAGGCTATGTTCATTCTATGCCTTCATTCTGCCTGCA2360.4634630113312778No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTACACATGGCTATGCAATCTAT2320.4556077060544766No Hit
CATAGATGCCCTTTTTGTGTACTTCCATGCCCTTTTTGTGTGCTTCTTTC1890.37116317432886237No Hit
CATAGATGCCCTTTTTGTGTACTTCCACACTGACGACATGGTTCTACACA1710.3358143005832564No Hit
CATAGATCATGGGACTTCAGCATGGCTACACATGGCTATGCAATCTATGA1710.3358143005832564No Hit
CATAGATCATGGGACTTCAGCATGGCCCACAAGCTTAATTTCAAGATGTC1700.3338504742640561No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCGAAACCCCATCTCTA1390.27297185836884585No Hit
CATAGACAGGGAGGCGTATAAGTGATGACTGATACAGGAAGGCCTTTCTA1280.25136976885764223No Hit
CATAGATCATGGGACTTCAGCATGGCCTGATGCAGATGACACAGAACATC1260.2474421162192416No Hit
CATAGACACCATGCCTGGCTAATTTTTAAATATTTTGTAGAGACCGGGTT1230.24155063726164056No Hit
CATAGACACCATGCCTGGCTAATTTTGTATTTTTAGTAGAGACAGGGTTT1200.23565915830403958No Hit
CATAGATCATGGGACTTCAGCATGGCCAAGATGGTGAAACCCCGTCTCTA1150.22584002670803793No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTATCCCTTTCCCTCACTCTCTCC1140.22387620038883763No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGACAGGGTT1120.21994854775043696No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGCGTATTCTAAATATACAATCA1110.21798472143123665No Hit
CATAGACAGGGAGGCGTATAAGTGATGGAGACAGCCGCTCACCTCTATGA1040.20423793719683433No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATAGTGAAACCCCATCTCTA1020.20031028455843367No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGAGAAACCCCATCTCTA1000.196382631920033No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAATCCCATCTCTA960.18852732664323169No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCGAAACCCCGTCTCTA950.18656350032403135No Hit
CATAGATGCCCTTTTTGTGTACTTCCAACACTGACTGATACAGGAAGGCC920.18067202136643035No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCTCGTCTCTA890.17478054240882937No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCAAAACCCCGTCTCTA890.17478054240882937No Hit
CATAGATCATGGGACTTCAGCATGGCACTGGTACCAAAACAGAGATATAG840.16496141081282772No Hit
CATAGACAGGGAGGCGTATAAGTGATGTGCTGGCTTGACTTTTCATCTAT830.1629975844936274No Hit
CATAGATCATGGGACTTCAGCATGGCAAAACCCCATCTCTACTAAAAATA830.1629975844936274No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTGGAGACAGCCGC820.16103375817442706No Hit
CATAGATGCCCTTTTTGTGTACTTCCACACATAGATGCCCTTTTTGTGTG810.15906993185522672No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGATGAAACCCTGTCTCTA800.1571061055360264No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATAGTGAAACCCTGTCTCTA790.15514227921682608No Hit
CATAGAAACCCCAAAGGCTATGTTCAAAATGGTCAAACAGGAGGTCTATG780.15317845289762574No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG780.15317845289762574No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACTCCATCTCTA770.1512146265784254No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG760.14925080025922507No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCAAAACCCTGTCTCTA760.14925080025922507No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCAAAACCCCATCTCTA760.14925080025922507No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCGAAACCCTGTCTCTA740.14532314762082443No Hit
CATAGATCATGGGACTTCAGCATGGCCAACGTGGTGAAACCCCATCTCTA740.14532314762082443No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATAGTGAAACCCCGTCTCTA730.1433593213016241No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTATGCAGATTTGGACCTGCG720.14139549498242376No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTCAGTACAAAATTTCTC700.1374678423440231No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG700.1374678423440231No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCATATGTCTTTATCAGCAGCATT690.13550401602482276No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTTGTAGAGACAGAGTT690.13550401602482276No Hit
CATAGATCATGGGACTTCAGCATGGCACAGTCTGAAGCACACCAGCACCT690.13550401602482276No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACTCTGTCTCTA670.13157636338642212No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTAAAACCCCATCTCTA660.12961253706722178No Hit
CATAGACACCATGCCTGGCTAATTTTTTGTATTTTTAGTAGAGATGGGGT660.12961253706722178No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG660.12961253706722178No Hit
CATAGATCATGGGACTTCAGCATGGCCTTCCTAACCATGGGCATATCTAT640.12568488442882111No Hit
CATAGATCATGGGACTTCAGCATGGCCAATATGGTGAAACCCCGTCTCTA630.1237210581096208No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCTCATCTCTA630.1237210581096208No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAAACCCATCTCTA610.11979340547122012No Hit
CATAGATCCTCTCATTGTCCAGTTTGGCCTCCTGGTCGCTCAATTGTGTT610.11979340547122012No Hit
CATAGATCATGGGACTTCAGCATGGCAAAACCCTTTCTCTACTAAAAATA600.11782957915201979No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGACAGCGTT600.11782957915201979No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTTCCTTCTGCTGGCTATTCTATG590.11586575283281945No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCTGTCTGTA590.11586575283281945No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGAAGAATCCCCATCTCTA570.11193810019441881No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG560.10997427387521848No Hit
CATAGATCATGGGACTTCAGCATGGCCAATATGGTGAAACCCCATCTCTA550.10801044755601814No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTGTAATTTTTGTATTTTT550.10801044755601814No Hit
CATAGATCATGGGACTTCAGCATGGCCTCATAGAATCCTTTCCCTCACTC550.10801044755601814No Hit
CATAGACACCATGCCTGGCTAATTTTTTTGTGTTTTTGGTAGAGATGGGG540.10604662123681781No Hit
CATAGATCATGGGACTTCAGCATGGCTAATTTTTTGCGTTTTTAGTAGAG540.10604662123681781No Hit
CATAGATCATGGGACTTCAGCATGGCCAACACGGTGAAACCCCATCTCTA530.10408279491761747No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCCCGTATCTGTTATTCAAAGGT530.10408279491761747No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG530.10408279491761747No Hit
CATAGATCATGGGACTTCAGCATGGCCAACACAGTGAAACCCCGTCTCTA520.10211896859841717No Hit
CATAGATCATGGGACTTCAGCATGGCCAACAAGGTGAAACCCCATCTCTA520.10211896859841717No Hit
CATAGATCATGGGACTTCAGCATGGCAAAACCCCGTCTCTACTAAAAATA510.10015514227921683No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG510.10015514227921683No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAAATATACAATCA510.10015514227921683No Hit
CATAGATCATGGGACTTCAGCATGGCCAACACGGTGAAACCCCGTCTCTA510.10015514227921683No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)