FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807614

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807614
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences157378
Sequences flagged as poor quality0
Sequence length150
%GC34

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCACTGATTCTGTATTTGCAAATTCTGTTTACTCGGAGATTTGA1774111.272858976477016No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGAATGATATTGTTGCAGAT129048.199367128823596No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAATATGGGCTGGGTGATCTATGT72304.5940347443734195No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACCAAAATGTCAGGGGATCCTCTA61623.9154138443746906No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA58103.6917485290193035No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCTCCAGACTCTATGTG57643.6625195389444523No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTTGCTCCTTCTCACACA55833.547509817128188No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTTCATAGAAGTGTATTA55053.497947616566483No Hit
CATAGAAGTACCATCAGAGTGAACAGGGCAGAGAGTGTGTTGTATTCTAT45782.9089199252754514No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGGAGCTGACTTACTGTTCTATGTG32612.072081231175895No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCTAGCCAAATTCCTTACCGATCTA32032.0352272871684733No Hit
CATAGATGGGATTATAGGTGTGAGCCACTGCGCCTGGCCAAAAATTTCCA23281.4792410629185782No Hit
CATAGATCCCATACTCCTCCATTACCCTACATAGACCTTTTTCTGTAGTC21751.3820229002783109No Hit
CATAGATGGGATTATAGGTGTGAGCCACCGCGCCTGGCCAAAAATTTCCA21481.3648667539300283No Hit
CATAGAGGAGTGACTTTTGTTGCTGCACCTTCCACTACCCACCTGCCTCT20711.3159399661960376No Hit
CATAGAGGCACGATCTTGTTTCACTGAGCTGAGGGTCACTTCTATGTGTA16991.0795663942863678No Hit
CATAGATGGGATTATAGGTGTGAGCCACCACGCCTGGCCAAAAATTTCCA14980.9518484159158205No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTACGGCAACATATCAGAAGCAT14550.9245256643241113No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGGGAAAGGTATGTGGCACATCTAT13010.8266720888561297No Hit
CATAGATCACCAGATGCCAGTTGTGCAATATGGGCTGGGTGATCTATGTG12900.819682547751274No Hit
CATAGAGCCCCCAGAGAAGAATGACCCCAGGTAGCAAAACAGAGTCTATG12660.8044326398861341No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTCCACTACCCACCTGCCTCTATGT12450.7910889705041365No Hit
CATAGATACCTGTCCTCTGCCTCGAGGAGAATGATATTGTTGCAGATTTC11000.6989541104855824No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCCATAGACCTTTTTCTGTA9780.6214337455044542No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTAGAGAAGTGTATTAA9620.6112671402610276No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTGTTTACTCGGAGATTT9380.5960172323958876No Hit
CATAGAGCAGCATTTCTCTCCAAGGAATCTTTGGGAGGCTATTAGTCTAT9100.5782256732198909No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCACTACCCACCTGCCT9050.5750486090813202No Hit
CATAGAAACAGCAAAGCCCTCCACCACCCACCTGCCTCTATGTGTAGAAC8680.551538334455896No Hit
CATAGAGGTGAGCGGCTGTCTTCAGCTCTTTGAGGCATCTATGTGTAGAA8490.5394654907293269No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCATCCAGTCCAGCTCCTTCTATGT7960.5057886108604761No Hit
CATAGAAACAGCAAAGCCTTCCACTACCCACCTGCCTCTATGTGTAGAAC7900.501976133894191No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGTTTACTCGGAGATTTGACTG7430.4721117309916253No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGGGCAGAGAGTGTGTTGTATTC6940.4409765024336311No Hit
CATAGAGTGCTCTCTTTCCCCACCCTACGATAGCGAGAAGAGTGGAGGCT6180.39268512752735457No Hit
CATAGATATTCTGCCCCCTCCTCTCCTACGATAGCGAGAAGAGTGGAGGC6150.390778889044212No Hit
CATAGATCCCATACTCCTCCATTACCCTTCCACTACCCACCTGCCTCTAT5930.3767998068345004No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACGGCAACATATCAGAAGCATCTA5780.3672686144187879No Hit
CATAGAAACAGCAAAGCCCTCCACCAGTCCATCCAGTCCAGCTCCTTCTA5700.3621853117970746No Hit
CATAGAGTGCTCTCTTTCCCCACCCTCACTGAGCTGAGGGTCACTTCTAT5600.3558311835199329No Hit
CATAGAGTGATCCTCCTTTCTCAGCTTACACTGCACATGGGGTCTATGTG5530.35138329372593374No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTAGAAAGAAGTGTATT5470.34757081675964874No Hit
CATAGATATTCTGCCCCCTCCTCTCCTACGGCAACATATCAGAAGCATCT5410.34375833979336373No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAACTACAAAACTTATCTGGGCAC5400.3431229269656496No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTATGTGTAAGGAATCTTTGGGAG5380.34185210131022126No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAACCTCCCACCCCAGCTGTCTATG5190.3297792575836521No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAACTTATCTGGGCAC4860.3088106342690846No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTCCACTACCCACCTGCCTCTATGT4830.30690439578594214No Hit
CATAGACCACACACACAACTGAGAGGAGAATGATATTGTTGCAGATTTCT4550.28911283660994547No Hit
CATAGAGGTGAGCGGCTGTCTCCAGCTCTTTGAGGCATCTATGTGTAGAA4500.28593577247137464No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTAGCTTACACTGCAC4490.28530035964366046No Hit
CATAGAGTGATCCTCCTTTCTCAGCCATGCTGAAGTCCCATGATCTATGT4460.283394121160518No Hit
CATAGACCATCCCTTCTACAAGAGGCAGGTGGGTAGAGAGTTCTGTAGAT4310.2738629287448055No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTACACTGAAGCAGAGGTAGATGG3790.2408214617036689No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGGAGCTGACTTACTGTTCT3740.23764439756509803No Hit
CATAGAGTGATCCTCCTTTCTCAGCCCCAGGTAGCAAAACAGAGTCTATG3430.2179465999059589No Hit
CATAGAGTCCTTCCCTCTCACACATGTCTACCCCAGGTAGCAAAACAGAG3360.21349871011195976No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACATAGGAATCTTTGGGAGGCTAT3330.21159247162881722No Hit
CATAGAGCCCCCAGAGAAGAATGACCGCCCCCAGGTAGCAAAACAGAGTC3180.20206127921310477No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAAACTTATCTGGGC3120.19824880224681976No Hit
CATAGAGGCACGATCTTGTTTCACTGTCGTCAGTGTGGGAAAGGTATGTG3120.19824880224681976No Hit
CATAGATCACCAGATGCCAGTTGTGCTATGAAGCAGAGGTAGATGGATCA2960.1880821970033931No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGCATTCTCTCAGGGCTGTTCT2950.18744678417567895No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTTCTGTTTACTCGGAGA2880.18299889438167977No Hit
CATAGATATTCTGCCCCCTCCTCTCCCCAGGTAGCAAAACAGAGTCTATG2830.17982183024310897No Hit
CATAGATGGGATTATAGGTGTGAGCCATCGCGCCTGGCCAAAAATTTCCA2790.17728017893225229No Hit
CATAGAGGCACAGGGATAATGAGGGAGAGCATTCTCTCAGGGCTGTTCTC2750.1747385276213956No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAGTACCAAAACTTATCTGGGCA2650.16838439934425395No Hit
CATAGAGGCACAGGGATAATGAGGGAGGAGAATGATATTGTTGCAGATTT2650.16838439934425395No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTATGTGTACAACCAAAATGTCAG2550.1620302710671123No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTAGAGTGATCTACAGTTTCAATAC2350.14932201451282898No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTATGAGGAGGAGCTGACTTACTG2260.1436032990634015No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGCATTCTCTCAG2250.14296788623568732No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGCATTCTCTCAGGGCTG2240.14233247340797317No Hit
CATAGACACAGGCCAATCTCAGCAGGGCAGAGAGTGTGTTGTATTCTATG2210.14042623492483067No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACTTATCTGGGCACGGTGGTCTAT2200.1397908220971165No Hit
CATAGACGAATTGCCCATGTCAGTAAATCTACGATAGCGAGAAGAGTGGA2030.12898880402597568No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGGCATTCTCTCAGGGCTGT1980.12581173988740485No Hit
CATAGAGTGCTCTCTTTCCCCACCCTACGGCAACATATCAGAAGCATCTA1970.12517632705969067No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTACGATAGCGAGAAGAGTGGAGGCT1970.12517632705969067No Hit
CATAGAGTGCTCTCTTTCCCCACCCCAGGTAGCAAAACAGAGTCTATGTG1960.12454091423197652No Hit
CATAGATCCCATACTCCTCCATTACCCTTACGGCAACATATCAGAAGCAT1940.12327008857654818No Hit
CATAGACCATCCCTTCTACAAGAGGCAACATAGGGCACTGAGACCACATC1940.12327008857654818No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTTGCTCCTTCTCACACAAATCTA1940.12327008857654818No Hit
CATAGATCCCATACTCCTCCATTACCCTCTAGCCAAATTCCTTACCGATC1930.12263467574883402No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGATGTGCAATATGGGCTGGG1870.11882219878254902No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGCCCCAGGTAGCAAAACAGAGT1840.11691596029940651No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTGTTTACTCGGAGATTTGACTGT1840.11691596029940651No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGCTCTGTTTACTCGGAG1810.11500972181626402No Hit
CATAGACGAAATGTACAGGTTGCTAAGTTAATTAGGGCATTCTCTCAGGG1770.11246807050540736No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAACTTATCTGGGCA1760.1118326576776932No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTAGAAGTGTATTAATTAT1710.10865559353912235No Hit
CATAGAGTGCTCTCTTTCCCCACCCTGTACTTTTCTAATCAATAGTACCC1700.1080201807114082No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTACGGCAACATATCAGAAGCATCT1700.1080201807114082No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACATATTGGGAAAGGTATGTGGCA1690.10738476788369404No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCATTCTCTCAGGGCTGTTCTC1660.10547852940055154No Hit
CATAGATGGGATTATAGGTGTGAGCCATTGCGCCTGGCCAAAAATTTCCA1580.10039522677883822No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)