FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807617

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807617
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences105069
Sequences flagged as poor quality0
Sequence length150
%GC46

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG3632534.57251901131637No Hit
CATAGAGGTAAACAAAATAAGACATTACATAGGAGTACACTGCCATGATT91298.688576078576935No Hit
CATAGAAGAGTGAGACTTGAGATGGGATCAGACTTTATGTGCAATCTATG51014.854904872036471No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACACCTGTAATCACAGC32783.1198545717576067No Hit
CATAGACTTCAGCCCTCACAAGCCTTACCTCAAATGCCAGGCTCTATGAG26982.5678363741921975No Hit
CATAGAGGGTGCTCCTGTGCTGGGTAGTGGTAGTCTATGAGACCAAGTCT23822.2670816320703535No Hit
CATAGACACATGTAGGATGGGGTGGCTGGGCATTGCTCTTGACATCTCTA14801.4085981593048378No Hit
CATAGACACATGTAGGATGGGGTGGAGGATGATCAATGCTGCTTCTATGA13091.2458479665743463No Hit
CATAGAGGGTGCTCCTGTACTGGGTAGTGGTAGTCTATGAGACCAAGTCT11751.118312727826476No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTGGTAGTCTATGAGACCAAGTCT11741.1173609723134321No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAGTAATAGCACTTT11371.0821460183308111No Hit
CATAGAGGTGTCCTTTCCCCACTTTACACTGACGACATGGTTCTACACAT10911.038365264730796No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAATCCCAGCACTTT9350.8898914046959617No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTACACTGACGACATGGTTCTA8600.8185097412176761No Hit
CATAGAAAATAATGTGGCCGGGCATTGCTCTTGACATCTCTATGAGACCA8270.7871018092872303No Hit
CATAGAGGTAAACAAAATAAGACATTACATAGGAGTTCCATGTGTGTGCG8030.7642596769741788No Hit
CATAGAGGTAAACAAAATAAGACATTACATAGGAGTACACTGACGACATG7220.6871674804176303No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTATATTTTCTAAAGCCTGGGATC7140.6795534363132799No Hit
CATAGAAAATAATGTGGCTGGGCATTGCTCTTGACATCTCTATGAGACCA6530.6214963500176075No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACGCCTATAATTCCAGC5910.5624875082088913No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGAGGATGATCAATGCTGCTTCTAT5300.504430421913219No Hit
CATAGAGCCACCATGTACTTCTATATAGCTTGGAGGATGATCAATGCTGC4400.4187724257392761No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAATCACAGCACTTT3920.3730881611131733No Hit
CATAGAGCAGACAAACTTGCAAAAGACTACACTGCCATCACAGTTCATTG3710.3531012953392533No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACGCCTGTAATCCCAGC3590.34168022918272756No Hit
CATAGACACATGTAGGATGGGGTGGGCATTGCTCTTGACATCTCTATGAG3490.33216267405228944No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTGGTATATTTTCTAAAGCCTGGG3470.33025916302620184No Hit
CATAGAACCAAAAATGGCTAGGCATGTGGCTCACACCTGTAATCACAGCA3400.32359687443489515No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTATTATCCTAGCACTTT3380.32169336340880755No Hit
CATAGAGGTGTCCTTTCCCCACTTTATGTTTTTGTTTGCTTTGTCAAAGA3300.31407931930445704No Hit
CATAGAACCAAAAATGGCTAGGCATGTTGGCTCACACCTGTAATCACAGC3220.3064652752001066No Hit
CATAGAAAGTCTGGACCAAGTGCCTCTGCTACCGTATGCCATGATTGTAA3040.28933367596531806No Hit
CATAGAGGTGTCCTTTCCCCACTTTAGTGGCTGGGCATTGCTCTTGACAT2990.284574898400099No Hit
CATAGAGCTATCTGGCAAAAACCCATCCTACATGCAGACAGGATGCGCAG2940.27981612083487994No Hit
CATAGACACATGTAGGATGGGGTGGCTCACGTGTGTAATCTCAGCACTTT2840.2702985657044419No Hit
CATAGACACATGTAGGATGGGGTGGCTTCCCTTACACCTTCTGCCATGAT2690.2560222330087847No Hit
CATAGACACATGTAGGATGGGGTGGCTCATGCGTGTCATCCCAGCCCTTT2460.2341318562087771No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACACCTGTAATCCCAGC2380.22651781210442662No Hit
CATAGAAAATAATGTGGCCGGGCATGGTAGCTCATGCCTGTAATCCCAGT2310.21985552351311996No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGTTCACTCCTGTAATCCCAGC2240.21319323492181327No Hit
CATAGACACATGTAGGATGGGGTGGCCTCTCCTTCACTTTCTGCCATGAT2210.21033796838268184No Hit
CATAGACACATGTAGGATGGGGTGGCTCATGCCTGTAACCCTAGCACTTT2180.20748270184355044No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG1810.1722677478609295No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG1810.1722677478609295No Hit
CATAGATGAAAGACAAGCAGGGAAGCCAGACAGGATGCGCAGATGGTCTA1800.17131599234788566No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG1680.15989492619135998No Hit
CATAGACACATGTAGGATGGGGTGGCTGCCATGATTGTAAGTTTCTTGAG1670.15894317067831615No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTGTGCTGGGTAGTGGTAGTCT1630.15513614862614092No Hit
CATAGAAGCATGGAAGACAAACAGCATGGCGGTGTTTGCAGATTTGGACC1570.14942561554787806No Hit
CATAGACACATGTAGGATGGGGTGGCTCATGCCTGTAATCCTAACACTTT1550.14752210452179043No Hit
CATAGAGGTGTCCTTTCCCCACTTTATGTTTTTGTTTGCTTTGTCTAAGA1550.14752210452179043No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG1480.14085981593048377No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC1460.13895630490439614No Hit
CATAGAACCAAAAATGGCTAGGCATGGTGGCTCACACCTGTAATCACAGC1440.13705279387830854No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG1440.13705279387830854No Hit
CATAGAACCAAAAATGGCTAGGCATGTTGGCTCATATCTGTAATCCCACC1430.13610103836526474No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCATGCCTATAATTCCAGC1400.1332457718261333No Hit
CATAGACACATGTAGGATGGGGTGGTATATTTTCTAAAGCCTGGGATCTA1380.13134226080004568No Hit
CATAGAACTCCATCATAAGTCAAAGAGCAGACAGGATGCGCAGATGGTCT1360.12943874977395806No Hit
CATAGACACATGTAGGATGGGGTGGCTGTCATGATTATCACCTTCTATGA1290.1227764611826514No Hit
CATAGAACCAAAAATGGCTAGGCATGGGCATTGCTCTTGACATCTCTATG1240.11801768361743235No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGTGTGTGCCTGTAGTCCCAGC1240.11801768361743235No Hit
CATAGAAAGTCTGGACCAAGTGCCTTACCTCAAATGCCAGGCTCTATGAG1230.11706592810438855No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG1220.11611417259134472No Hit
CATAGAAAGTCTGGACCAAGTGCCTCACTCTGTTGCTCCTGCTCTTGCCA1210.11516241707830092No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCATGCCTGTAATCCCAGC1180.11230715053916951No Hit
AATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG1180.11230715053916951No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG1170.11135539502612568No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGACTCATGCCTGTAATCCCAGC1130.10754837297395044No Hit
CATAGAAAGTCTGGACCAAGTGCCTCATTCCCACAGACTTTCCTGAGCCT1120.10659661746090664No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG1120.10659661746090664No Hit
CATAGAACTGTTTAAGAGAAGTCAGCGATGTTCCATGTGTGTGCGATGTT1080.1027895954087314No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG1070.10183783989568759No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTTACTCCTGTAATTCCAGC1060.10088608438264379No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)