FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807618

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807618
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences105069
Sequences flagged as poor quality0
Sequence length150
%GC45

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA3639134.635334875177264No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGTGTACTCCTATGTAATGTC91308.68952783408998No Hit
CATAGATTGCACATAAAGTCTGATCCCATCTCAAGTCTCACTCTTCTATG51474.898685625636486No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGTGATTACAGGTG45764.355233227688472No Hit
CATAGACTACCACTACCCAGCACAGGAGCACCCTCTATGTGTAGAACCAT39563.76514480960131No Hit
CATAGAGCCTGGCATTTGAGGTAAGGCTTGTGAGGGCTGAAGTCTATGTG26772.5478495084182775No Hit
CATAGAGATGTCAAGAGCAATGCCCAGCCACCCCATCCTACATGTGTCTA14801.4085981593048378No Hit
CATAGAAGCAGCATTGATCATCCTCCACCCCATCCTACATGTGTCTATGT13011.2382339224699959No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGTG12821.2201505677221636No Hit
CATAGACTACCACTACCCAGTACAGGAGCACCCTCTATGTGTAGAACCAT11981.1402031046264836No Hit
CATAGACTACCACCACCCAGTACAGGAGCACCCTCTATGTGTAGAACCAT11561.1002293730786437No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTATTACTACAGGTG11201.0659661746090665No Hit
CATAGAGATGTCAAGAGCAATGCCCGGCCACATTATTTTCTATGTGTAGA8740.8318343184002893No Hit
CATAGAACATCGCACACACATGGAACTCCTATGTAATGTCTTATTTTGTT8050.7661631880002665No Hit
CATAGAGATGTCAAGAGCAATGCCCAGCCACATTATTTTCTATGTGTAGA7880.7499833442785218No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAGAGTGCTGGAATTATAGGCG7580.7214306788872075No Hit
CATAGATCCCAGGCTTTAGAAAATATACCACCCAGTACAGGAGCACCCTC7350.6995403020871999No Hit
CATAGATCCCAGGCTTTAGAAAATATACCATGTCGTCAGTGTACTCCTAT6030.573908574365417No Hit
CATAGAAGCAGCATTGATCATCCTCCACCCAGTACAGGAGCACCCTCTAT5490.5225137766610514No Hit
CATAGAAGCAGCATTGATCATCCTCCAAGCTATATAGAAGTACATGGTGG4310.4102066261218818No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGCA4140.39402678240013705No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGCG3850.3664258725218666No Hit
CATAGAGAATACAATGAACTGTGATGGCAGTGTAGTCTTTTGCAAGTTTG3610.34358374020881516No Hit
CATAGATCCCAGGCTTTAGAAAATATACCACCACCCAGTACAGGAGCACC3580.34072847366968373No Hit
CATAGAGATGTCAAGAGCAATGCCCACCCCATCCTACATGTGTCTATGTG3430.3264521409740266No Hit
CATAGACCATCCTCCCACCTTGACCTTCCAAAGTGCTAGGATAATAGGTG3300.31407931930445704No Hit
CATAGAAGGTGATAATCATGACAGCCAACTAATCTTTGACAAAGCAAACA3130.2978994755827123No Hit
CATAGAGATGTCAAGAGCAATGCCCAGCCACTAAAGTGGGGAAAGGACAC3060.29123718699140566No Hit
CATAGACTCAAGAAACTTACAATCATGGCATACGGTAGCAGAGGCACTTG3010.28647840942618663No Hit
CATAGACCATCTGCGCATCCTGTCTGCATGTAGGATGGGTTTTTGCCAGA2980.28362314288705515No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGAGATTACACACG2920.2779126098087923No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGAG2820.26839505467835423No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAGGTGTAAGGGAAGCCAC2630.2503116999305219No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAACAGGTACTGGGATTACAGG2460.2341318562087771No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGGGCTGGGATGACACGCA2400.22842132313051425No Hit
CATAGACCATCCTCCCACCTTGACCTCTCAAAGTGCTAGGGTTACAGGCA2260.21509674594790087No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAAGTGAAGGAGAGGCCAC2200.20938621286963804No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA2120.20177216876528759No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA1920.18273705850441138No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG1820.1732195033739733No Hit
CATAGACCATCTGCGCATCCTGTCTGGCTTCCCTGCTTGTCTTTCATCTA1740.1656054592696228No Hit
CATAGACCATCCTCCCACCTTGACCTCCATCTTGACCTCCCAAAGTGCTG1710.1627501927304914No Hit
CATAGACCATCCTCCCACCTTGACCTTCCCGGTAGCTGGGACTACAGGCA1690.16084668170440378No Hit
CATAGACTACCACTACCCAGCACAGCATTTTAACACAGCATTGAAGTTCT1670.15894317067831615No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGCCACCCCATCCTACATGTG1660.15799141516527235No Hit
CATAGACCATCCTCCCACCTTGACCTCCCCAGTGCTGGAATTACAGGAGT1630.15513614862614092No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA1590.1513291265739657No Hit
CATAGAAGGTGATAATCATGACAGCCAACTGATCTTAGACAAAGCAAACA1550.14752210452179043No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA1520.14466683798265903No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGTATTACAGGTG1510.1437150824696152No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGGTGGGATTACAGATA1500.1427633269565714No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA1480.14085981593048377No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA1480.14085981593048377No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA1470.13990806041743997No Hit
CATAGATCCCAGGCTTTAGAAAATATACCACCCCATCCTACATGTGTCTA1410.13419752733917711No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGGGCCTTCAGGTCA1380.13134226080004568No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGAGATTACAGAAG1370.13039050528700186No Hit
CATAGACCATCTGCGCATCCTGTCTGCTCTTTGACTTATGATGGAGTTCT1370.13039050528700186No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTAGGATTACAAGTG1350.12848699426091426No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA1310.12467997220873901No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGTTAGGATTACAGGCA1300.12372821669569521No Hit
CATAGAAGGTGATAATCATGACAGCCACCCCATCCTACATGTGTCTATGT1280.1218247056696076No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTACTGGGATTATAGGCG1270.12087295015656377No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA1270.12087295015656377No Hit
CATAGACCATCTGCGCATCCTGTCTGCTCTATGTGTAGAACCATGTCGTC1250.11896943913047617No Hit
CATAGACTCAAGCAACTTACAATCATGGCAGTGTACTCCTATGTAATGTC1240.11801768361743235No Hit
CATAGAGATGTCAAGAGCAATGCCCATGCCTAGCCATTTTTGGTTCTATG1230.11706592810438855No Hit
CATAGAGCCTGGCATTTGAGGTAAGGCACTTGGTCCAGACTTTCTATGTG1220.11611417259134472No Hit
CATAGAGGTGAGCGGCTGTCTCCAGGCTCAGGAAAGTCTGTGGGAATGAG1170.11135539502612568No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAGGCCATGGGGAGCCAGC1160.11040363951308188No Hit
CATAGAACATCGCACACACATGGAACATCGCTGACTTCTCTTAAACAGTT1070.10183783989568759No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)