FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807623

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807623
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences124093
Sequences flagged as poor quality0
Sequence length150
%GC38

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG63735.135664380746698No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTCATCTATGA49433.9833028454465604No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCCTTTCCTCAGTTCTTTTTCTA42103.392616827701804No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGACACTTTGGACTCTGCCTCTA39803.207271965380803No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTGGAGAGAAATGCTGCTCTATGAG39213.159726978959329No Hit
CATAGAGTCTGGAGGAAGGTGTCAGCCTCCAGACTCAACCCTTCTATGAG37022.983246436140637No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGCAGCAACAAAAGTCACTCCTCT25722.0726390690852825No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTAACTTCATAGCACATCAT23821.919528095863586No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGCCGCTCACCTCTATGAGACCAA20661.6648803719790803No Hit
CATAGATCACCCAGCCCATATTGCACAACTGGCATCTGGTGATCTATGAG19231.5496442184490664No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCAAGTCTCTGC18051.454554245606118No Hit
CATAGATGCCTCAAAGAGCTGGAGACAGCCGCTCACCTCTATGAGACCAA17401.4021741758197481No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACAGCTAAAAATCTTGGAG15401.2410047303232254No Hit
CATAGATGCTTCTGATATGTTGCCGTACACATAGATGCTCAGATCTCAAA14571.1741194104421684No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGGTGGCTCACACCTATAATCCCA13781.1104574794710418No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAGTGGCTCACACCTATAATCCCA13431.0822528265091504No Hit
CATAGAAGGAGCTGGACTGGATGGACTACAAGTACCCACCACCTCTATGA12671.0210084372204717No Hit
CATAGAATACAACACACTCTCTGCCCTGTTCACTCTGATGGTACTTCTAT11320.912219061510319No Hit
CATAGATGTGCCACATACCTTTCCCAGGACACTTTGGACTCTGCCTCTAT11080.8928787280507361No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCTAACTTCATAGCACATCATGTCT11060.8912670335957709No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAACAAGATCGTGCCTCTATGAGAC10010.8066530747100965No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGCAAACTAACACAGAAACA9420.7591080882886223No Hit
CATAGAGGCAGGTGGGTGGTGGAGGGCTTTGCTGTTTCTATGAGACCAAG9210.7421852965114873No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGCTTTGCTGTTTCTATGAGACCAAG9100.7333209770091785No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAATTTGCAAATACAGAATCA8720.7026987823648393No Hit
CATAGATGGAAATTTTTGGCCAGGCGTGGTGGCTCACACCTATAATCCCA8430.6793292127678435No Hit
CATAGATGCTTCTGATATGTTGCCGTATAGATGCTCAGATCTCAAAAGGC7980.6430660875311258No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGAATTTGCAAATACAGAATCAGTG7880.6350076152562998No Hit
CATAGAATACAACACACTCTCTGCCCTGCACATCTACAAGGACACTCATC7660.6172789762516822No Hit
CATAGATGCTTCTGATATGTTGCCGTAGCAAACTAACACAGAAACAGAAA7570.6100263512043387No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTAATGGAGGAGTATGGGATCTAT7430.5987444900195821No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGTCAGCCTCCAGACTCAACCCTT7380.5947152538821691No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTATAGACCAAAGCTAGAAACTC6790.5471702674606947No Hit
CATAGACCCCATGTGCAGTGTAAGCTACACTGACGACATGGTTCTACACA6540.5270240867736296No Hit
CATAGAAGGAGCTGGACTGGATGGACAAAGAACAGCTAAAAATCTTGGAG6490.5229948506362164No Hit
CATAGAACAGTAAGTCAGCTCCTCCTACACTGACGACATGGTTCTACACA6320.5092954477690119No Hit
CATAGATGCTTCTGATATGTTGCCGTAGGGTAATGGAGGAGTATGGGATC6310.5084896005415294No Hit
CATAGAACATCTACAGAACTCTCTACCCAGGTGCAAATTGTCAGTGTGTC6180.4980135865842553No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACATTAGCTTAGTTAATTA5980.4818966420346031No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGGTGGGGAAAGAGAGCACTCTATG5890.47464401698725955No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGACCAAAGCTAGAAACTCCCATCT5750.463362155802503No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGCTGAGAAAGGAGGATCAC5630.4536919890727116No Hit
CATAGATGCTTCTGATATGTTGCCGTAGCCTGTTCACTCTGATGGTACTT5620.45288614184522896No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTGGGGAAAGAGAGCACTCTATGA5350.43112826670319837No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAGCAAACTAACACAGAAAC5340.4303224194757158No Hit
CATAGAGAACAGCCCTGAGAGAATGCTAGAGAACAGCTAAAAATCTTGGA5260.4238756416558549No Hit
CATAGACCACCGTGCCCAGATAAGTTGCCTTTCCTCAGTTCTTTTTCTAT5130.4133996276985809No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAAGCAAACTAACACAGAA4820.38841836364661986No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCGAGGCAGAGGACAGGTATC4480.361019557912211No Hit
CATAGATGCCTCAAAGAGCTGAAGACATGTGTGAGAGGGAAGGACTCTAT4290.34570846059004134No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGACACTTTGGACTCTGCCTCTATGA4110.3312032104953543No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTACACATAGAACAGCTAA4080.32878566881290644No Hit
CATAGATGCTTCTGATATGTTGCCGTATGGTGGAGGGCTTTGCTGTTTCT3960.31911550208311507No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCTCAGCACAGTGAAACAAGATC3830.3086394881258411No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTAGTTTTGGTAGAGACAGGGT3820.3078336408983585No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAATAGAACAGCTAAAAATCT3780.30461025198842806No Hit
CATAGATGATCCATCTACCTCTGCTTCACACGGACTACAAGTACCCACCA3680.2965517797136019No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTGCTGAGATTGGCCTGTGT3580.2884933074387757No Hit
CATAGAACATCTACAGAACTCTCTACCCATCTATGAGACCAAAGCTAGAA3550.2860757657563279No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGTACTCTCAGTTGTGTGTG3440.27721144625401917No Hit
CATAGACTCTGTTTTGCTACCTGGGGACACTGACGACATGTGTGAGAGGG3410.2747939045715713No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGCACATAGAACAGCTAAAA3360.27076466843415825No Hit
CATAGAATACAACACACTCTCTGCCCTGACACTGACGACATGGTTCTGCA3200.2578711127944364No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTATTTTTGGTAGAGACAGGGT3190.2570652655669538No Hit
CATAGAACAGCTAAAAATCTTGGAGCTCTATGAGACCAAGTCTCTGCTAC3160.25464772388450596No Hit
CATAGAATACAACACACTCTCTGCCCTGACACTGACGACACGGACTACAA3150.25384187665702335No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGGTGGGGAAAGAGAGCACTCTA3080.24820094606464504No Hit
CATAGATGATCCATCTACCTCTGCTTCATAGCACAACTGGCATCTGGTGA3020.24336586269974939No Hit
CATAGATGCTTCTGATATGTTGCCGTAGGTCATTCTTCTCTGGGGGCTCT3010.24256001547226677No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAGCAAACTAACACAGAAA2940.23691908487988847No Hit
CATAGATGCTTCTGATATGTTGCCGTACACATAGATGCTTCTGATATGTT2830.22805476537757974No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTACACACGGACTACAAGTACCC2820.2272489181500971No Hit
CATAGATGTGGTCTCAGTGCCCTATGAGACCACAGTGAAACAAGATCGTG2800.22563722369513187No Hit
CATAGATGATCCATCTACCTCTGCTTCAACACGGACTACAAGTACCCACC2800.22563722369513187No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCTGCCTGTTCACTCTGATGGTAC2780.22402552924016667No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTCACATAGAACAGCTAAA2760.2224138347852014No Hit
CATAGATGATCCATCTACCTCTGCTTCATAGCACATCATGTCTATGAGAC2740.2208021403302362No Hit
CATAGATTTGTGTGAGAAGGAGCAAGACCAAAGCTAGAAACTCCCATCTA2740.2208021403302362No Hit
CATAGACTCTGTTTTGCTACCTGGGGGCTCTACTCGGTCATTCTTCTCTG2730.21999629310275357No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGTCTATAGGACACTTTGGA2720.21919044587527095No Hit
CATAGAGAACAGCTAAAAATCTTGGAGCTCTATGAGACCAAGTCTCTGCT2700.21757875142030575No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGAACAGCTAAAAATCTTGG2690.2167729041928231No Hit
CATCTACAAGGACACTCATCTATGAGACCAAGTCTCTGCTACCGTAATGT2630.21193782082792745No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGACATAGAACAGCTAAAAA2620.21113197360044483No Hit
CATAGAGAACAGCCCTGAGAGAATGCTGCTCTATGAGACCAAGTCTCTGC2560.20629689023554917No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTACACTGACGACATGTGTGAGA2550.2054910430080665No Hit
CATAGACTCTGTTTTGCTACCTGGGGCTGAGAAAGGAGGATCACTCTATG2550.2054910430080665No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAACGCAAACTAACACAGA2500.20146180687065346No Hit
CATAGACTCTGTTTTGCTACCTGGGGCATAGAACAGCTAAAAATCTTGGA2490.20065595964317084No Hit
CATAGACCTGTGTGTGAGGCATTGTTATAGACCACACGCACAACTGGCAT2470.19904426518820564No Hit
CATAGATCATGGGACTTCAGCATGGCTGAGAAAGGAGGATCACTCTATGA2410.19420918182330993No Hit
CATAGACTCTGTTTTGCTACCTGGGGTGGGGAAAGAGAGCACTCTATGAG2410.19420918182330993No Hit
CATAGAGAACAGCCCTGAGAGAATGCTACACATAGAGAACAGCTAAAAAT2400.19340333459582731No Hit
CATAGAACATCTACAGAACTCTCTACCCACCTGCCTCTTGTAGAAGGGAT2230.17970393172862287No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTCATAGACCAAAGCTAGAAACT2150.17325715390876198No Hit
CATAGATGCTCAGATCTCAAAAGGCTTCTATGAGACCAAGTCTCTGCTAC2140.17245130668127936No Hit
CATAGAATACAACACACTCTCTGCCCTGTGCCCTCCCTCATTATCCCTGT2080.16761622331638368No Hit
CATAGAGAACAGCCCTGAGAGAATGCACATAGAGAACAGCTAAAAATCTT2060.16600452886141845No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGGTACTTTTGGTAGAGACAGGG2060.16600452886141845No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGAGAACAGCTAAAAATCTT2030.1635869871789706No Hit
CATAGACTCTGTTTTGCTACCTGGGGATAGAACAGCTAAAAATCTTGGAG2000.16116944549652276No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGACTACAAGTACCCACCAC2000.16116944549652276No Hit
CATAGAATACAACACACTCTCTGCCCTGACACATAGAGAACAGCTAAAAA1950.15714020935910972No Hit
CATAGAACAGTAAGTCAGCTCCTCCTATGACAGTGAAACAAGATCGTGCC1940.15633436213162707No Hit
CATAGATTTGTGTGAGAAGGAGCAAGATCGTGCCTCTTGTAGAAGGGATG1930.1555285149041445No Hit
CATAGAGAACAGCCCTGAGAGAATGGAGAACAGCTAAAAATCTTGGAGCT1910.15391682044917926No Hit
CATAGAGAACAGCCCTGAGAGAATGCTGCTCTATGAGACCAAGCCTCTAA1910.15391682044917926No Hit
CATAGATGTGCCACATACCTTTCCCAGTGTGTTGCCTTTCCTCAGTTCTT1860.1498875843117662No Hit
CATAGACTCTGTTTTGCTACCTGGGGATGGCTGATTGGGGATGGCTGGTT1850.14908173708428354No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGATGGCTCACACCTATAATCCCA1820.14666419540183573No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCTCAGTCCAGTGAACTCAAGGG1800.1450525009468705No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTACACGGACTACAAGTACCCAC1780.14344080649190527No Hit
CATAGACCTGTGTGTGAGGCATTGTTACACTGACGACATGGTTCTACACA1770.14263495926442266No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCAAGTCTAGGG1740.1402174175819748No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGTCTATGTGTAGGCTGAGA1740.1402174175819748No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGTCTTAGGACACTTTGGAC1740.1402174175819748No Hit
CATAGAACATCTACAGAACTCTCTACCCAACACTGACGACATGTGTGAGA1720.13860572312700958No Hit
CATAGAGAACAGCCCTGAGAGAATGCACACATAGAGAACAGCTAAAAATC1710.13779987589952697No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAACCTCTATGAGACCTGG1630.13135309807966605No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTATGTGCCTCTTGTAGAAGGG1630.13135309807966605No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTTTGGACTCT1600.1289355563972182No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTACATAGAGAACAGCTAAAAAT1590.12812970916973562No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTGTGCCTCTTGTAGAAGGGATG1580.12732386194225298No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGCAGAGGACAGGTATCTATGAG1560.12571216748728775No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGATAGAACAGCTAAAAATCTT1520.1224887785773573No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCAAGTCCTCTA1510.12168293134987469No Hit
CATAGACCTGTGTGTGAGGCATTGTTGTCAGTGTAGGGTGGGGAAAGAGA1500.12087708412239206No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAATGGCTCACACCTATAATCCCA1490.12007123689490946No Hit
CATAGACCCCATGTGCAGTGTAAGCTATAGAGGTGGTGGAGGGCTTTGCT1440.1160420007574964No Hit
CATAGAGAACAGCCCTGAGAGAATGCATAGAGAACAGCTAAAAATCTTGG1420.11443030630253118No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCAAGTCACATG1420.11443030630253118No Hit
CATAGACAGCTGGGGTGGGAGGTTAGAGAGCACTAGGGTGGGGAAAGAGA1410.11362445907504855No Hit
CATAGATGCTTCTGATATGTTGCCGTAGGGTGGGGAAAGAGAGCACTCTA1410.11362445907504855No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGATCGTGCCTCTTGTAGAAGG1400.11281861184756593No Hit
CATAGAATACAACACACTCTCTGCCCTGTGCCTCTTGTAGAAGGGATGGT1370.1104010701651181No Hit
CATAGACTCTGTTTTGCTACCTGGGGGGTCAGGGTAATGGAGGAGTATGG1340.10798352848267025No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGACACTTTGGACTCTGCCTCTATG1320.10637183402770502No Hit
CATAGACTCTGTTTTGCTACCTGGGGGCTCTATGGTGGAGGGCTTTGCTG1300.10476013957273979No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTGCTACCGTAGGCTGAGAAAGG1280.10314844511777459No Hit
CATAGAAGTGACCCTCAGCTCAGTGACACTGACGACATGGTTCTACACAT1260.10153675066280936No Hit
CATAGAGTCTCGAGGCAGAGGACAGGTATCTATGAGACCAAGTCTCTGCT1260.10153675066280936No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGAGAGGAGGGGGCAGAATA1250.10073090343532673No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)