FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807626

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807626
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences207864
Sequences flagged as poor quality0
Sequence length150
%GC44

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA5498226.450948697225108No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGT136596.571123426856021No Hit
CATAGAAAGGGACAAGGGCTCACTCTAGCCTGGGAGACATCTATGTGTAG94774.559231035677174No Hit
CATAGAACAATCAGGCACCCACCATGCTGAAGTCCCATGATCTATGTGTA48112.3144940922911137No Hit
CATAGATCTCAAACAGCCTCTCCCAGGAAAGTTGGAACCTATCAGTGTCT44362.1340876727090787No Hit
CATAGAACCAACCCTGATTCTGCTGCTCACTCTTTGGGTTCTATGTGTAG42832.060481853519609No Hit
CATAGATGTTGTTGTTCTGTTGCCCAATATGAACAGAAAGAAGCTCTATG33501.6116306815995074No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAATTCTCTATGTG33251.5996035869607053No Hit
CATAGAGCCATCATCATTTCTCACCCAGGAAAGTTGGAACCTATCAGTGT32441.5606358003309857No Hit
CATAGAGCCATCATCATTTCTCACCCAGGGTAATTCTGGCCTTGTTCTAT29591.4235269214486395No Hit
CATAGATGTTGTTGTTCTGTTCCCCAATATGAACAGAAAGAAGCTCTATG25301.2171419774467922No Hit
CATAGATGAAAGAGCATTGGTTGTAACACCGAAAAACACCCTCTATGTGT24711.1887580340992188No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGTGTAGAACCATG24471.1772120232459686No Hit
CATAGATCTCAAACAGCCTCTCCCAGGGTAATTCTGGCCTTGTTCTATGT24161.1622984258938536No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTGTGTGGCCAACAGGAAGGTCTA23201.1161143824808528No Hit
CATAGATGCCAAGAAGAGAAAAGCAGCCTCTATGTGTAGAACCATGTCGT21191.0194165415848824No Hit
CATAGATGAAAGAGCATTGGTTGTGACACCGAAAAACACCCTCTATGTGT16950.8154370165107955No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAAATTCTCTTGACA15800.760112381172305No Hit
CATAGAGGCGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA15550.7480852865335026No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGTATGCAGTCTGT15390.7403879459646692No Hit
CATAGAAAGGGACAAGGGCTCACTCTGCTGCTCACTCTTTGGGTTCTATG13500.6494631104953239No Hit
CATAGACGGGAAGAGTAAGACCACCCTCTATGTGTAGAACCATGTCGTCA11660.560943693953739No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTCAGGAAAGTTGGAA11270.5421814263172074No Hit
CATAGATAGCAGCAATCTCAGGCCTGGGAGACCCCATATCTACCAAAGAT11120.534965169533926No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAGTGTGCCATACCAAGAATAA10820.5205326559673633No Hit
CATAGAGATCTTCTCGGCTTAGCGGCCATTGTCGCCTTCTCTTCTCTATG10460.503213639687488No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGTAGTATGCAGTCTGTGAGCTGTC9350.4498133394912058No Hit
CATAGAGCCATCATCATTTCTCACCCAGTATAGAGCCATTGTCGCCTTCT9210.44307816649347653No Hit
CATAGAGGGCTATCCTTGCTCAGATCAGGGTAATTCTGGCCTTGTTCTAT9080.4368240772812993No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTACCAAAAGCACAAG8820.4243158988569449No Hit
CATAGATGTTGTTGTTCTGTTGCCCAGAAGCTTTGAGATTTGTGTCTGTT8260.3973752068660278No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGAAGCTTTGAGAT7790.37476426894507947No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAAATTCTCTTGAC7250.3487857445252665No Hit
CATAGATCCCTGGCAAGAATTCCTCTTCTTCCTCCTCCTGTCTATGTGTA7230.34782357695416233No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACATTTATCGGGAGCCACAGA6680.32136396874879725No Hit
CATAGATGGTAAGATGACATAGTGAAGAGTCATATCGTCAGTGTAGAGGC5810.27950967940576527No Hit
CATAGAAAGGGACAAGGGCTCACTCTCTGCTGCTCACTCTTTGGGTTCTA5540.26652041719585884No Hit
CATAGATAGCAGCAATCTCAGGCCTCATGGTGGGAGTATACTGATAGCTC5500.2645960820536505No Hit
CATAGATGCCAAGAAGAGAAAAGCAGCTCCAAAAATGTCAGGGGATCCTT5490.26411499826809837No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTACACTGAAACATTTTCTGGTCA5480.2636339144825463No Hit
CATAGAAAGGGACAAGGGCGCACTCTAGCCTGGGAGACATCTATGTGTAG4910.23621213870607705No Hit
CATAGAGCCATCATCATTTCTCACCCAGTATGCAGTCTGTGAGCTGTCTA4670.22466612785282686No Hit
CATAGATCAAGGTGTGAGCATGGTCCTCTTCTTCCTCCTCCTGTCTATGT4620.22226070892506639No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTGCTGCTCACTCTTTG4240.2039795250740869No Hit
CATAGATCTCAAACAGCCTCTCCCAGCAGAAGCTTTGAGATTTGTGTCTG4220.20301735750298272No Hit
CATAGATCTCAAACAGCCTCTCCCAGGTAAACAAACTTCTGGCCCTCTAT4160.2001308547896702No Hit
CATAGATGCCAAGAAGAGAAAAGCAGGAAAGTTGGAACCTATCAGTGTCT3980.1914713466497325No Hit
CATAGATGTTGTTGTTCTGTTGCCCATGTCGTCAGTGTAGAAGCTTTGAG3910.18810376015086788No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAGTGTGTGCCATACCAAGAAT3750.1804064195820344No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGC3750.1804064195820344No Hit
CATAGATCTAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGT3720.17896316822537814No Hit
CATAGATGCCAAGAAGAGAAAAGCAGCTCTATAGTATGCAGTCTGTGAGC3710.17848208443982605No Hit
CATAGATGCCAAGAAGAGAAAAGCAGCGGTAAGTGCCATACCAAGAATAA3680.17703883308316976No Hit
CATAGATGTTGTTGTTCTGTTGCCCATGTCGTCAGTGTACTATGGCTTAA3470.16693607358657583No Hit
CATAGATCCAGCTTCATCCATGTCCCAGTGTAGAAGCTTTGAGATTTGTG3440.16549282222991957No Hit
CATAGAGGAAAGAACAACTGCGGACGTAGAGGCAAGGGTACTATTTTGAT3370.16212523573105492No Hit
CATAGATAGCAGCAATCTCAGGCCTCTATGAGACCAGGAGGCTGAAACTC3350.16116306815995074No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA3160.152022476234461No Hit
CATAGACTCACTCTGTCACCCAAGCTGGAGTTCAGTGGTATGATCACAGC3150.1515413924489089No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGCTGCTGCTCACTCTTTGGG3060.14721163837894008No Hit
CATAGATGTTGTTGTTCTGTTGCCCACTCTTTGGGTTCTATGTGTAGAAC3040.1462494708078359No Hit
CATAGATGTTGTTGTTCTGTTGCCCAGGAAAGTTGGAACCTATCAGTGTC2930.1409575491667629No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTGAGGTTTCCTGGGC2920.14047646538121078No Hit
CATAGAGGGCTATCCTTGCTCAGATCATGGTGGGAGTATACTGATAGCTC2830.13614671131124198No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA2800.13470345995458569No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG2750.13229804102682524No Hit
CATAGATGAAAGAGCATTGGTTGTAACACGAACATTTATCGGGAGCCACA2720.13085478967016898No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGGTAAACAAACTT2630.12652503560020015No Hit
CATAGAACAATCAGGCACCCACCATGTCGACCAAAAGCACAAGGGAGAAT2480.11930877881691875No Hit
CATAGAACAATCAGGCACCCACCATGTCTGTGACACCGAAAAACACCCTC2460.11834661124581457No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA2400.11546010853250202No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA2390.11497902474694993No Hit
CATAGAAAGGGACAAGGGCTCACTCTTCTGCTGCTCACTCTTTGGGTTCT2340.11257360581918947No Hit
CATAGATCAAGGTGTGAGCATGGTCCCTCTCCTTCATCCTCTTCCTCCTC2260.10872493553477273No Hit
CATAGATCAAGGTGTGAGCATGGTCCCCTGTGTGGCCAACAGGAAGGTCT2160.10391409767925182No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAGGAAAGTTGGAACCTATC2130.10247084632259555No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA2080.1000654273948351No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)