FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807627

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807627
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences89567
Sequences flagged as poor quality0
Sequence length150
%GC46

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG3137335.027409648642916No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTCTCTGACTGTGTTAATTTAA50085.591345026628111No Hit
CATAGAAGAGTGAGACTTGAGATGGGATCAGACTTTATGTGCAATCTATG41844.671363336943294No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACACCTGTAATCACAGC26822.9944064220081055No Hit
CATAGAGGGTGCTCCTGTGCTGGGTAGTGGTAGTCTATGAGACCAAGTCT20142.248596023088861No Hit
CATAGACACATGTAGGATGGGGTGGAGGATGATCAATGCTGCTTCTATGA18532.0688423191577257No Hit
CATAGACTTCAGCCCTCACAAGCCTTTGTACCACAGACACTGGCCCCAGG16631.8567106188663234No Hit
CATAGACTTCAGCCCTCACAAGCCTTACCTCAAATGCCAGGCTCTATGAG15871.7718579387497626No Hit
CATAGAGGTAAACAAAATAAGACATTACATAGGAGTACATGTGGAGGATG14101.574240512688825No Hit
CATAGACACATGTAGGATGGGGTGGCTGGGCATTGCTCTTGACATCTCTA14051.568658099523262No Hit
CATAGAGGTAAACAAAATAAGACATTACATAGGAGTACACTGACGACATG12601.406768117721929No Hit
CATAGAGGGTGCTCCTGTACTGGGTAGTGGTAGTCTATGAGACCAAGTCT11341.2660913059497358No Hit
CATAGAAAGTCTGGACCAAGTGCCTCTCTGACTGTGTTAATTTAAAAGAA7680.8574586622305089No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTGGTAGTCTATGAGACCAAGTCT7540.841827905366932No Hit
CATAGAAAATAATGTGGCCGGGCATTGCTCTTGACATCTCTATGAGACCA7180.801634530574877No Hit
CATAGACACATGTAGGATGGGGTGGCCTCTCCTTCACTTTCTGCCATGAT6050.6754719930331484No Hit
CATAGACTTCAGCCCTCACAAGCCTTTGCTACCGTATGATGAGGGTATAA5800.6475599272053323No Hit
CATAGAGGTGTCCTTTCCCCACTTTACACTGACGACATGGTTCTACACAT5370.5995511739814887No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAATCCCAGCACTTT5120.5716391081536727No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAATCACAGCACTTT4690.523630354929829No Hit
CATAGAACTCCATCATAAGTCAAAGAGCAATGCCATCACAGTTCATTGTA4080.4555249143099579No Hit
CATAGAGCTATCTGGCAAAAACCCATCAGACTATCCTCTTGCCTCCGTCC3840.42872933111525446No Hit
CATAGAGGTAAACAAAATAAGACATTACATAGGAGTCTGGAGGATGATCA3650.40751616108611427No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACGCCTATAATTCCAGC3630.405283195819889No Hit
CATAGAAAGTCTGGACCAAGTGCCTCTCTCTGACTGTGTTAATTTAAAAG3540.39523485212187526No Hit
CATAGAAAGTCTGGACCAAGTGCCTCTGACTGTGTTAATTTAAAAGAACA3520.39300188685564996No Hit
CATAGACACATGTAGGATGGGGTGGCTTCCCTTACACCTTCTGCCATGAT3370.3762546473589603No Hit
CATAGAAAATAATGTGGCTGGGCATTGCTCTTGACATCTCTATGAGACCA3270.3650898210278339No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAGTAATAGCACTTT3190.35615795996293276No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACGCCTGTAATCCCAGC3100.346109616264919No Hit
CATAGAACCAAAAATGGCTAGGCATGTGGCTCACACCTGTAATCACAGCA2910.3248964462357788No Hit
CATAGAACCAAAAATGGCTAGGCATGTTGGCTCACACCTGTAATCACAGC2780.3103821720053144No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACACCTGTAATCCCAGC2490.2780041756450478No Hit
CATAGACACATGTAGGATGGGGTGGGCATTGCTCTTGACATCTCTATGAG2470.2757712103788226No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTATTATCCTAGCACTTT2420.2701887972132594No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTGCTGGAGGATGATCAATGCT2380.26572286668080874No Hit
CATAGAAAGTCTGGACCAAGTGCCTCACAGTTCATTGTATTCTCTATGAG2290.255674522982795No Hit
CATAGACACATGTAGGATGGGGTGGCTCACGTGTGTAATCTCAGCACTTT2200.2456261792847812No Hit
CATAGAAAGTCTGGACCAAGTGCCTCCTGCCATGATTGTAAGTTTCTTGA2120.2366943182198801No Hit
CATAGAGGTAAACAAAATAAGACATTACATAGGAGTTCCATGTGTGTGCG2110.23557783558676745No Hit
CATAGAACCAAAAATGGCTAGGCATGGTGGCTCACACCTGTAATCACAGC2020.22552949188875365No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTGGTATATTTTCTAAAGCCTGGG2020.22552949188875365No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGTTCACTCCTGTAATCCCAGC1920.21436466555762723No Hit
CATAGACACATGTAGGATGGGGTGGCTCATGCGTGTCATCCCAGCCCTTT1920.21436466555762723No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGAGGATGATCAATGCTGCTTCTAT1900.212131700291402No Hit
CATAGAAAATAATGTGGCCGGGCATGGTAGCTCATGCCTGTAATCCCAGT1830.2043163218596135No Hit
CATAGACACATGTAGGATGGGGTGGTATATTTTCTAAAGCCTGGGATCTA1810.2020833565933882No Hit
CATAGAAGCATGGAAGACAAACAGCATGGCGGTGTTTGCAGATTTGGACC1760.19650094342782498No Hit
CATAGACACATGTAGGATGGGGTGGCTCATGCCTGTAATCCTAACACTTT1710.19091853026226177No Hit
CATAGAACCAAAAATGGCTAGGCATGGGCATTGCTCTTGACATCTCTATG1710.19091853026226177No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG1460.16300646443444572No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG1420.15854053390199516No Hit
CATAGATGAAAGACAAGCAGGGAAGCCAGACAGGATGCGCAGATGGTCTA1390.1551910860026572No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC1340.149608672837094No Hit
CATAGAGGTGTCCTTTCCCCACTTTATGTTTTCGTTTGCTTTGTCAAAGA1330.14849219020398138No Hit
CATAGAGGTGTCCTTTCCCCACTTTATGTTTTTGTTTGCTTTGTCGAAGA1330.14849219020398138No Hit
CATAGAAAGTCTGGACCAAGTGCCTCACAGTTCATTGTATTCTCTATGGG1310.1462592249377561No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTATATTTTCTAAAGCCTGGGATC1300.14514274230464347No Hit
CATAGATCATGGGACTTCAGCATGGCTAGACCCAGACCCCCGGATCTGAC1300.14514274230464347No Hit
AATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG1290.14402625967153082No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG1250.13956032913908023No Hit
CATAGATCATGGGACTTCAGCATGGGCATTGCTCTTGACATCTCTATGAG1240.1384438465059676No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACACTTGTAATCCTAGC1220.13621088123974232No Hit
CATAGAAAGTCTGGACCAAGTGCCTCTGCTACCGTATGGAGGATGATCAA1210.1350943986066297No Hit
CATAGAGGTGTCCTTTCCCCACTTTATGTTTTTGTTTGCTTTGTTGAAGA1110.12392957227550325No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACACCTGTAATACCAGC1070.11946364174305268No Hit
CATAGAGCATTACCCTCAAACTATCCCTACACTGACGACATGGTATATTT1070.11946364174305268No Hit
CATAGAACTCCATCATAAGTCAAAGAGCAGACAGGATGCGCAGATGGTCT1060.11834715910994005No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCATGCCTATAATTCCAGC1060.11834715910994005No Hit
CATAGAAAGTCTGGACCAAGTGCCTTACCTCAAATGCCAGGCTCTATGAG1050.1172306764768274No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG1050.1172306764768274No Hit
CATAGACACATGTAGGATGGGGTGGCTCATGCCTGTAACCCTAGCACTTT1050.1172306764768274No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG1030.11499771121060212No Hit
CATAGAGGTGTCCTTTCCCCACTTTATGTTTTTGTTTGCTTTGTCAAAGA1010.11276474594437683No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG1000.11164826331126419No Hit
CATAGATCCACAAAGACCAAGAGTGTCTCTGACTGTGTTAATTTAAAAGA990.11053178067815154No Hit
CATAGAGGTAAACAAAATAAGACATTACATAGGAGTTGCAATATAGATGA990.11053178067815154No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG980.1094152980450389No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG980.1094152980450389No Hit
CATAGACTTCAGCCCTCACAAGCCTTCTTGCCTGCTGCCATGTAAGATGT950.106065850145701No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACACCTGTAATCCAAGC920.10271640224636307No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)