FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807629

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807629
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences160939
Sequences flagged as poor quality0
Sequence length150
%GC38

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCTTGGGTGCGAACATCAAGGAAGTTTCTGTGAGATCTATGAGA1669910.375980961730843No Hit
CATAGACGGATTATTCTCTCCATGGTCTACCAGTTATTAGTTGAATGAGC94045.8432076749575925No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGTAATAACCAGGCCCCTCTATGAG83365.1796022095328045No Hit
CATAGAGAAGACTCCCTCAACCCACCCACAGCCAGGAAAGAATCTATGAG70284.3668719204170525No Hit
CATAGAAATGATGCTGAAGGGCCTGCCCTCTCTGCTGTTCCTTCTATGAG49323.064515126849303No Hit
CATAGATCATGGGACTTCAGCATGGCTCAGGTATGTCTTTATTAGCTCTA44192.7457608162098683No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGTTCTGGGCCCCAGTGTGAA43932.7296056269766806No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG43822.722770739224178No Hit
CATAGACTCATTGCACTTTCCACAACTGTGTGCTTGAACCAGATTCTATG42792.6587713357234732No Hit
CATAGACTCATTGCACTTTCCACAACTGTCATTGTCGCTGTCCCATCTAT41462.5761313292613974No Hit
CATAGACGTGACTAAAAGCATGTTGGTGGAAGGGTAAGAGAGGGTCTATG38322.381026351599053No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAAGGAAGTTTCTGTGAGATC37272.3157842412342564No Hit
CATAGATCACGTAGAAACTGGAGAGGCTAATCTGAAATCTTCGTGTTCTA36472.266075966670602No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTCTTCCTTTTCTGCCTTCATCTA36242.251784837733551No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTTATTTTAAAGGACTGGAAGC35702.218231752403084No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAGGAACCATGGGAGGTCTAT29351.8236723230540763No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGGGGTAAGGCGTACTGGTCTATGA27871.7317120151113155No Hit
CATAGAAATGATGCTGAAGGGCCTGTTTCCCCACTCAAATACCATCTATG27581.713692765581991No Hit
CATAGACCAGCAGACACTCCCATCATTTATTTTAAAGGACTGGAAGCCTC23431.4558310912830326No Hit
CATAGACTCATTGCACTTTCCACAACTGTCCCAACTGTCTCTGAAAAATT20211.2557552861643233No Hit
CATAGACCAACATTTCTTCTCCCAGGGTGGAAGGGTAAGAGAGGGTCTAT18501.1495038492845115No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGAAGTGATGGGCTAGATCTATGA17801.1060091090413138No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAGAAGTAGGAAGTATTACCCCT14040.8723802185921374No Hit
CATAGATTGTGTGTCTCTTCTATATTAACAGTCCCAACTGTCTCTGAAAA13670.8493901416064471No Hit
CATAGAAGCCATGAACACAGGATTGAGGAGCTGAGTCATGGGGTCTATGA13150.8170797631400717No Hit
CATAGAGAAGACTCCCTCAACCCACGCTGTCCTTCTCTGAATCTATGAGA12770.7934683327223357No Hit
CATAGATCAAGGAAAACACCAGCCCACGCTGTCCTTCTCTGAATCTATGA11300.7021293782116206No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGCCCCAGTGTGAATACTTCT10480.6511783967838746No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTGCCTCTAAGTAAACTGAAT8970.5573540285449766No Hit
CATAGAAAATTTGTGATGGTAAATCATGGGACATGCCAGGAATCAATGTT8310.5163447020299616No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCTGTTTCCCCACTCAAATACCATC8200.5095098142774592No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAAAGAAATCTACAAAGGATTCTGG8190.5088884608454134No Hit
CATAGATGGCCAAGATACGAGCACATCTGTTTCCCCACTCAAATACCATC7690.47782078924312943No Hit
CATAGAGTCCAACTATTCCAGCACCACGCTGTCCTTCTCTGAATCTATGA7630.47409266865085525No Hit
CATAGACCAGCAGACACTCCCATCATCAGGAACCATGGGAGGTCTATGAG7610.472849961786764No Hit
CATAGACCAGCAGACACTCCCATCATTGGTTCTACAAAGGATTCTGGGCC7400.4598015397138046No Hit
CATAGACCAGCAGACACTCCCATCATCAAGGAAGTTTCTGTGAGATCTAT6210.3858604813003685No Hit
CATAGATGTGTAGCCTGGGTCTGACATGCCAGGAATCAATGTTCTATGAG6200.38523912786832276No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTGCTTCTTGTGGTAACTGGTC5440.338016267032851No Hit
CATAGAAATGATGCTGAAGGGCCTGCAGAAGTAGGAAGTATTACCCCTCT5050.31378348318306937No Hit
CATAGAGCTGTACTGCATCTTTTCTCAAACTGCTGGGGTTGCTCTATGAG4990.3100553625907953No Hit
CATAGACCTCCGACAGTTTTTATGCACCTTCATTGTTGCTCTATGAGACC4650.2889293459012421No Hit
CATAGACATTTAATCCTCACAATGACCCATACACTGACGCTATACCACAC4190.2603470880271407No Hit
CATAGAAAAAACAGTTGGCCAGGCATCTATGAGGAGCTGAGTCATGGGGT4130.2566189674348666No Hit
CATAGACAGTGCCTTTGTGCGTGTTACCGTACAAGGGGTAAGGCGTACTG4060.25226949341054683No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAGGAGCTGAGTCATGGGGTCTATG4000.24854137281827277No Hit
CATAGACCTCCGACAGTTTTTATGCACCCACAGCCAGGAAAGAATCTATG3780.23487159731326776No Hit
CATAGACCCAAGACCCCAGCCTTTACACACTGCCCTCTCTGCTGTTCCTT3770.23425024388122206No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGCTGAAGTGATGGGCTAGATCTA3670.22803670956076527No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGACGCTATACCACACTACA3660.22741535612871958No Hit
CATAGATGTGTAGCCTGGGTCTGACAAGGGGTAAGGCGTACTGGTCTATG3630.22555129583258252No Hit
CATAGACGTGACTAAAAGCATGTTGGTCAGTGTCCGCTATGTAGTTCAGG3370.20939610659939478No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGATCATTGTTCACT2790.17335760754074525No Hit
CATAGATCAAGGAAAACACCAGCCCACCCACAGCCAGGAAAGAATCTATG2770.1721149006766539No Hit
CATAGACGGATTATTCTCTCCATGGTCTACACTGACGCTATACCACACTA2720.1690081335164255No Hit
CATAGACGTGACTAAAAGCATGTTGGTCGGTGGAAGGGTAAGAGAGGGTC2700.16776542665233413No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGATGCTGAAGTGATGGGCTAGAT2630.16341595262801434No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCAGTGTTGCTGAAGTGATGGGCTA2540.1578237717396032No Hit
CATAGAGTCCAACTATTCCAGCACCACACTGGCTCAGGTATGTCTTTATT2500.15533835801142046No Hit
CATAGAAATGATGCTGAAGTGATGGGCTAGATCTATGAGACCAAGTCTCT2490.1547170045793748No Hit
CATAGACCTCCGACAGTTTTTATGCACTGTCCCAACTGTCTCTGAAAAAT2480.1540956511473291No Hit
CATAGATGTGTAGCCTGGGTCTGACACCGTAAGGCTAATCTGAAATCTTC2380.1478821168268723No Hit
CATAGACCAACATTTCTTCTCCCAGGGTCCCTTCCCCACACCCTCTTCTT2320.14415399623459818No Hit
CATAGATTGTGTGTCTCTTCTATATTAACAGTCATGGTGGAAGGGTAAGA2310.1435326428025525No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGCTATACCACACTA2270.14104722907436978No Hit
CATAGACGTGACTAAAAGCATGTTGGTGGTGGAAGGGTAAGAGAGGGTCT2260.14042587564232412No Hit
CATAGATCCACGTGAGAATAAAGCATACAAATGAGAAACCTGGATGCTTC2180.13545504818595866No Hit
CATAGAGCTGTACTGCATCTTTTCTCAGACCAGTGAAGCAGAGCTTCCCA2170.13483369475391296No Hit
CATAGATCAAGGAAAACACCAGCCCAAGGGGTAAGGCGTACTGGTCTATG2160.1342123413218673No Hit
CATAGACCAACATTTCTTCTCCCAGGGTCCCAACTGTCTCTGAAAAATTT2100.1304842207295932No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGTAGGCTAATCTGAAATCTT2070.12862016043345617No Hit
CATAGAAATGATGCTGAAGGGCCTGATGCTGAAGTGATGGGCTAGATCTA2020.12551339327322775No Hit
CATAGAGCTGTACTGCATCTTTTCTCAGACTGCTGGGGTTGCTCTATGAG1960.12178527268095365No Hit
CATAGAAATGATGCTGAAGGGCCTGCGATGCTGAAGTGATGGGCTAGATC1960.12178527268095365No Hit
CATAGAAATGATGCTGAAGGGCCTGCAGTCTTTGGAGGAATCTATGAGAC1920.11929985895277093No Hit
CATAGAGTGCCTGTTTCCTCATTCGTACATAGAGTCTGTTTCCCCACTCA1880.11681444522458818No Hit
CATAGACGTGACTAAAAGCATGTTGGTGCATTACAGAGAGGAGATCTATG1840.11432903149640547No Hit
CATAGACCAACATTTCTTCTCCCAGGGTGGTTTCTCATTTGTTCTTCCTT1810.11246497120026841No Hit
CATAGACCAGCAGACACTCCCATCATTCACATTGCTTCTTGTGGTAACTG1800.11184361776822274No Hit
CATAGACCAACATTTCTTCTCCCAGGGTCTACCAGTTATTAGTTGAATGA1740.10811549717594865No Hit
CATAGATGTTTTATCAAAGGCATGCTCATACACTGACGATCATTGTTCAC1700.10563008344776594No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACTCCCAAGTATTAGAGCAAGT1690.10500873001572024No Hit
CATAGACCTCCGACAGTTTTTATGCACTGTCATTGTCGCTGTCCCATCTA1670.10376602315162888No Hit
CATAGAGATCCCACCATTTGCCATCTATGAGACCAAGTCTCTGCTACCGT1660.10314466971958319No Hit
CATAGAGAAGACTCCCTCAACCCACCTTCCCCACACCCTCTTCTTCTATG1660.10314466971958319No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)