FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807632

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807632
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences91157
Sequences flagged as poor quality0
Sequence length150
%GC47

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA3526538.686003269085205No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGT41454.5471000581414485No Hit
CATAGAAAGGGACAAGGGCTCACTCTAGCCTGGGAGACATCTATGTGTAG31003.400726219599153No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGTGTAGAACCATG18682.0492117994229733No Hit
CATAGAACAATCAGGCACCCACCATGCTGAAGTCCCATGATCTATGTGTA12951.4206259530260978No Hit
CATAGAGCCATCATCATTTCTCACCCAGGAAAGTTGGAACCTATCAGTGT12371.3569994624658557No Hit
CATAGAGGCGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA10421.1430828131684896No Hit
CATAGATGTTGTTGTTCTGTTGCCCAATATGAACAGAAAGAAGCTCTATG9921.0882323902717288No Hit
CATAGATGTTGTTGTTCTGTTGCCCATGTCGTCAGTGTAGAAGCTTTGAG9391.0300909420011628No Hit
CATAGATCTCAAACAGCCTCTCCCAGGGTAATTCTGGCCTTGTTCTATGT9291.0191208574218107No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAATTCTCTATGTG8050.8830918086378446No Hit
CATAGATCTCAAACAGCCTCTCCCAGGAAAGTTGGAACCTATCAGTGTCT7550.8282413857410841No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAACCTGTGTATATT6710.7360926752745264No Hit
CATAGATGTTGTTGTTCTGTTCCCCAATATGAACAGAAAGAAGCTCTATG6420.7042794299944053No Hit
CATAGATGAAAGAGCATTGGTTGTAACACCGAAAAACACCCTCTATGTGT6180.6779512270039603No Hit
CATAGATGTTGTTGTTCTGTTGCCCAGGAAAGTTGGAACCTATCAGTGTC5960.6538170409293856No Hit
CATAGAACCAACCCTGATTCTGCTGCTCACTCTTTGGGTTCTATGTGTAG5530.6066456772381715No Hit
CATAGAGCCATCATCATTTCTCACCCAGGGTAATTCTGGCCTTGTTCTAT5500.6033546518643659No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAAATTCTCTTGACA5370.5890935419112082No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTCCCAACCTGTGTATATTCT4930.5408251697620589No Hit
CATAGAAAGGGACAAGGGCTCACTCTGCTGCTCACTCTTTGGGTTCTATG4480.49145978915497435No Hit
CATAGATGAAAGAGCATTGGTTGTGACACCGAAAAACACCCTCTATGTGT3920.4300273155106026No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTGAGGTTTCCTGGGC3900.4278332985947321No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGAAGCTTTGAGAT3890.4267362901367969No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTACCAAAAGCACAAG3810.4179602224733152No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTGTGTGGCCAACAGGAAGGTCTA3240.3554307403710083No Hit
CATAGAACCAACCCTGATTCTGCTGGAGGCTGAAACTCTAAGGGTCTATG3080.33787860504404493No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCACAGAGCCTTCAGGTCA2770.3038713428480534No Hit
CATAGAGATCTTCTCGGCTTAGCGGCCATTGTCGCCTTCTCTTCTCTATG2770.3038713428480534No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAAATTCTCTTGAC2650.2907072413528308No Hit
CATAGAGCAGCGTGTGTCCGTTAAAAGGCCATTGTCGCCTTCTCTTCTCT2460.2698640806520618No Hit
CATAGATAGCAGCAATCTCAGGCCTCCAAACTTGGACTGAAATCTGTACC2460.2698640806520618No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACATTTATCGGGAGCCACAGA2370.2599910045306449No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTGCTGCTCACTCTTTG2350.2577969876147745No Hit
CATAGAGGAAAGAACAACTGCGGACGCTTTGTTCTTTCGCTCTTCACAAT2320.2545059622409689No Hit
CATAGAAAGGGACAAGGGCTCACTCTCTGCTGCTCACTCTTTGGGTTCTA2260.2479239114933576No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTGCCATACCAAGAATAAGAA2210.24243886920368155No Hit
CATAGAAAGGGACAAGGGCGCACTCTAGCCTGGGAGACATCTATGTGTAG2110.23146878462432943No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAGGAAAGTTGGAACCTATC2080.2281777592505238No Hit
CATAGATCTCAAACAGCCTCTCCCAGTAGATCTGTGACACCGAAAAACAC2070.2270807507925886No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA2040.22378972541878295No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAGTGTACTATGGCTTAATGTT2030.22269271696084775No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG2030.22269271696084775No Hit
CATAGACGGGAAGAGTAAGACCACCCTCCAGGAAAGTTGGAACCTATCAG1940.21281964083943086No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTACTATGGCTTAATG1880.20623759009181958No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA1860.20404357317594918No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGCCCGCGCAGAGCCTTCAGGTCA1860.20404357317594918No Hit
CATAGATGTTGTTGTTCTGTTGCCCAACACTGAAACATTTTCTGGTCAGC1840.20184955626007875No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA1760.1930734885965971No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA1720.18868545476485624No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA1700.18649143784898584No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGTAGTATGCAGTCTGTGAGCTGTC1690.1853944293910506No Hit
CATAGATCCAGCTTCATCCATGTCCCTGCAAAGGACACGAACTTATCCTT1590.1744243448116985No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA1580.1733273363537633No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA1550.17003631097995767No Hit
CATAGATGGTAAGATGACATAGTGAAGAGTCACACTGAAACATTTTCTGG1540.16893930252202247No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGCTGCTGCTCACTCTTTGGG1540.16893930252202247No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGTGTAGAACTGCT1510.1656482771482168No Hit
CATAGAGCCATCATCATTTCTCACCCAGAAGCTTTGAGATTTGTGTCTGT1450.15906622640060555No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGGGCCTTCAGGTCA1440.15796921794267035No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAGTGTAGAAGCTTTGAGAT1420.15577520102679993No Hit
CATAGAGGGCTATCCTTGCTCAGATCAGGGTAATTCTGGCCTTGTTCTAT1390.1524841756529943No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAGTGTAGAGGTTTCCTGGGCA1380.1513871671950591No Hit
CATAGATAGCAGCAATCTCAGGCCTCACACTGAAACATTTTCTGGTCAGC1380.1513871671950591No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA1270.13932007415777176No Hit
CATAGATCTAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGT1260.13822306569983653No Hit
CATAGACAAGCCTGCCAAGACCTCTCGTCAGTGTACCAAAAGCACAAGGG1250.13712605724190133No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTGCCATACCAAGAAT1230.1349320403260309No Hit
CGTAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA1210.13273802341016047No Hit
CATAGAGATCTTCTCGGCTTAGCGGCACCACACCAAAAGCACAAGGGAGA1190.13054400649429007No Hit
CATAGATAGCAGCAATCTCAGGCCTGGGAGACCCCATATCTACCAAAGAT1190.13054400649429007No Hit
CATAGACACAACGTTTGAGACTGCCTAAGCCCAGAAGTTTGAGCCTACAA1140.12505896420461401No Hit
CATAGATGGTAAGATGACATAGTGAAGAGTCAGTGTACCAAAAGCACAAG1130.1239619557466788No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGAGGCAAGGGTAC1100.12067093037287316No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAGGTTTCCTGGGCATCAAGTC1100.12067093037287316No Hit
CATAGACACAACGTTTGAGACTGCCTGATTGTTAACCTGTGTATATTCTC1070.11737990499906753No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAGTGTACATTTATCGGGAGCC1040.1140888796252619No Hit
CATAGAGGTGAGCGGCTGTCCCCACAAGTCCGCGCAGAGCCTTCAGGTCA1010.11079785425145627No Hit
CATAGATGTTGTTGTTCTGTTGCCCACTCTTTGGGTTCTATGTGTAGAAC950.104215803503845No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGTGTAGAACCACT940.10311879504590979No Hit
AATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA930.10202178658797459No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCTGCGCAGAGCCTTCAGGTCA930.10202178658797459No Hit
CATAGATGTTGTTGTTCTGTTGCCCATGTCGTCAGTGTACTATGGCTTAA920.10092477813003937No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTATCTGTGACACCGAAAAACACC920.10092477813003937No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)