FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807644

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807644
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences204585
Sequences flagged as poor quality0
Sequence length150
%GC37

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGACGCGGTATTGTCAGGAGCTAACTGGGATACTGCTCTATGAGACC127076.211110296453796No Hit
CATAGACCTGGTACTTCTCTTCTGGGTCCATTTTTGGTTCTCTTCTATGA106115.18659725786348No Hit
CATAGAACTGAGGCTGGTAGAGGGAGGCGTGGTATGAGGGGAATCTATGA91194.457316030011976No Hit
CATAGATTACTGGGAGACTGGCGCTCACCTCTATGAGACCAAGTCTCTGC79673.8942248942982136No Hit
CATAGACAGTCCTGCCGTGTACATGTACAGCCTACATCCCTCATCTATGA62243.042256274897964No Hit
CATAGAGGGAAGAGAAGAGGAGCTGACATCCCAACCACACGTCTATGAGA61963.0285700320160323No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGGCCCATAATACACTTTTCTAT57842.82718674389618No Hit
CATAGATGTCCCCATTCATCCTGCAAACAGAATGGGACCCATCTATGAGA53082.594520614903341No Hit
CATAGAACTTGTGCTTTTGGTGTCACCCGTAATCCCTCCCTTTTCTATGA46312.263606813793778No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGAGGAACAGGGAGATGTTCTATG34731.697582911748173No Hit
CATAGATTACTGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGCT31081.5191729598944204No Hit
CATAGAGGCAAGCTAACTCTGAGATCCATCAGAGCATCACCCCTTCTATG27381.3383190360974657No Hit
CATAGACAGTATGGGGGAAACGGCTCTCTTCCGCCTTTATCCTTCTATGA25691.2557127844172349No Hit
CATAGAAAAGTCACCATGCAGCCCTGGCAAAAGGGTAAGAGTTCTATGAG24351.1902143363394189No Hit
CATAGACGCGGTATTGTCAGGAGCTGACTGGGATACTGCTCTATGAGACC23981.1721289439597233No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTGAGGTTCTTCAACACAGCTA22881.1183615612092774No Hit
CATAGAAAAGTCACCATGCAGCCCTGGGCCCATAATACACTTTTCTATGA22761.1124960285455923No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTAC21251.038688075860889No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTATAGATTATGCTCTCTTCCGCCT21191.0357553095290466No Hit
CATAGAGCACCCAACTATCCTTCAGCATGAGAAGAATGGCCTCTATGAGA20000.9775887772808368No Hit
CATAGAAAAGTCACCATGCAGCCCTGTGATTGTCCTTGCACACCATGGAT19410.9487499083510521No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCTCTCTTCCGCCTTTATCCTTCT18030.8812962827186743No Hit
CATAGATGCACCAGAAGCCACCTACCGTACCAAGTATATGACACATTACA17740.8671212454481023No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAACAAGGGCATGGTCAAGT17700.8651660678935407No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCGTGTACAGCCTACATCCCTCAT17320.8465918811252048No Hit
CATAGACCATGTAATACCATCGTGAGCAGTGTCCTGGCAAAAGGGTAAGA16890.8255737224136667No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTCCTGGGCCCATAATACACTTTTC15310.7483442090084805No Hit
CATAGATTACTGGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGC14160.6921328543148325No Hit
CATAGAATCCCTGCCCTTGTCCTTGCACACCATGGATCTATGAGACCAAG13620.6657379573282498No Hit
CATAGACCCCCATGCAACCACATCTATACAATGGGCACACTTAACACCTC13570.6632939853850478No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCTACCGTACCCCTTTACCTACCTTC12700.6207688735733314No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCCTTGTCCTTGCACACCATGGAT12270.5997507148617934No Hit
CATAGAATTCCCCAATGTCCTGTGCAAACAGAATGGGACCCATCTATGAG12220.5973067429185913No Hit
CATAGAAAAGTCACCATGCAGCCCTGGTGGTGCTGGAACTAGTTCTATGA11890.5811765280934575No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCGAACAAGGGCATGGTCAAGTGTC11880.5806877337048171No Hit
CATAGATCATGAATGACTCCCACTCTGTAGATTATGCTCTCTTCCGCCTT10820.5288755285089327No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGCAAACAGAATGGGACCCA10590.5176332575702031No Hit
CATAGAATTGCCTACTTTGGGACCCATGCAAACAGAATGGGACCCATCTA10430.5098125473519564No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCAAGTATATGACACATTACACC10240.5005254539677885No Hit
CATAGACAGAACACCACACCCCTGTCCTTGTCCTTGCACACCATGGATCT10010.4892831830290588No Hit
CATAGATGTGTGAGAGAGGGAGAGACAGCCTTCTCTGATACCATCCCTCT9140.4467580712173424No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCAAA8480.41449764156707475No Hit
CATAGATCATGGGACTTCAGCATGGCAAAAGGGCAAGTGTATGGTCAGTT8350.4081433145147494No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTAGCCTTCTCTGATACCATCCCT8340.4076545201261089No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGTAAGAGTTCTATGA8110.39641224918737933No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCAGCATGAGAAGAATGGCCTCT7460.36464061392575214No Hit
CATAGAACTGAGGCTGGTAGAGGGAGCCTTGGAGGCCTAGCCTGGCAGCT7360.35975267003934797No Hit
CATAGATGCACCAGAAGCCACCTACCGTACCCCTTTACCTACCTTCTCAG7120.3480216047119779No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAGTGTACAGCCTACATCCCT6930.33873451132780996No Hit
CATAGATCATGAATGACTCCCACTCTGGTGGTGCTGGAACTAGTTCTATG6890.3367793337732483No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTGCAAACA6870.33580174499596743No Hit
CATAGACGCGGTATTGTCAGGAGCTGACATCCCAACCACACGTCTATGAG6870.33580174499596743No Hit
CATAGAAGGGCAATTATCTCATCCTAGACGAAGGGCAAGTGTATGGTCAG6860.335312950607327No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGTGGTGCTGGAACTAGTTCTATG6860.335312950607327No Hit
CATAGAATCACTTGAGTTTGTAAAAGCAGAGGGCAAGTGTATGGTCAGTT6840.3343353618300462No Hit
CATAGATGGCATGTCACTTCCTCAGAGCATCACCCCTTCATTTTGCTGGA6830.3338465674414058No Hit
CATAGAAAAGTCACCATGCAGCCCTGAGGTTCTTCAACACAGCTATTCTA6820.33335777305276537No Hit
CATAGAATTGCCTACTTTGGGACCCATCTGCAAACAGAATGGGACCCATC6690.3270034460004399No Hit
CATAGAATTCCCCAATGTCCTGTGCACACCATGGATCTATGAGACCAAGT6690.3270034460004399No Hit
CATAGAATTGCCTACTTTGGGACCCAGCATGAGAAGAATGGCCTCTATGA6680.3265146516117995No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAGCATGAGAAGAATGGCCTCTAT6600.32260429650267614No Hit
CATAGATTTGGCACTCACATACACGCACGCTGACATCCCAACCACACGTC6580.3216267077253953No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTATGAGGGCAAGTGTATGGTCAGT6530.3191827357821932No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGCAAGTGTATGGTCA6520.3186939413935528No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGAACAAGGGCATGGTCAA6350.3103844367866657No Hit
CATAGAGCATCCTCGTAATAGCAAACATTACACTGACGACAATGGGCACA6340.30989564239802525No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCAAACAGAATGGGACCCATCTAT6320.3089180536207444No Hit
CATAGATTTGGCACTCACATACACGCCTGTTTCAGGGATTCATGTAAATT6280.3069628760661827No Hit
CATAGAATCCCTGCCCTTGACCTTGGGGGAAGAGAAACAGAATCTATGAG6210.30354131534569984No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTGCAAACAGA6070.296698193904734No Hit
CATAGAATCCCTGCCCTTGACCTTGCACACCATGGATCTATGAGACCAAG6020.2942542219615319No Hit
CATAGAATCCCTGCCCTTGACCTTGGGTCCATTTTTGGTTCTCTTCTATG5960.29132145562968936No Hit
CATAGAGAAAGGCAGGCGAAGTTAGCCATAGATCTGGGAGGAACAGGGAG5940.29034386685240854No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAAGCCTTCTCTGATACCATC5840.28545592296600436No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTACCTGGGCCCATAATACACT5600.2737248576386343No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCTACCGACAAGCACATTATTATTGG5430.2654153530317472No Hit
CATAGATTACTGGGAGACTGGCGCTCTCTTCCGCCTTTATCCTTCTATGA5420.26492655864310677No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCACAGCCCAGTTTTCCTTCTCT5370.26248258669990465No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGCAAAAGGGTAAGAGTTCTATG5310.2595498203680622No Hit
CATAGACCCCCATGCAACCACATCTACACTGACGACATGGTTCTACACAT5120.25026272698389423No Hit
CATAGATCATGGGACTTCAGCATGGCTCTCTTCCGCCTTTATCCTTCTAT5070.24781875504069212No Hit
CATAGAATTCCCCAATGTCCTTGCACACCATGGATCTATGAGACCAAGTC5040.24635237187477088No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCCTGGGCCCATAATACACTTTTCTA4970.24293081115428794No Hit
CATAGAACTTGTGCTTTTGGTGTCACAAGCACATTATTATTGGTTGGTTC4880.23853166165652417No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCCAGCATGAGAAGAATGGCCTCT4680.22875577388371582No Hit
CATAGACAGAACACCACACCCCTGTCCTTGCACACCATGGATCTATGAGA4130.2018720825084928No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTGC4090.19991690495393113No Hit
CATAGACCATGTAATACCATCGTGAGCAGTGAAGGTTTTCCGGCTTGAGG4060.19845052178800987No Hit
CATAGATGCGCCAGGGTAAAGTCATACACTGACGACATGGTTCTACACAT3720.18183151257423563No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGAGAGGAAAATGTCAGTGGGCCA3650.17840995185375272No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG3500.17107803602414642No Hit
CATAGACAGAACACCACACCCCTGTCTATGAGACCTTAGGAGTTCTGGCC3500.17107803602414642No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGACCAACAAGGGCATGGT3490.17058924163550604No Hit
CATAGACTTTCTGAAATTGTTTGCTGCTTTGGGGGAAGAGAAACAGAATC3310.16179094263997848No Hit
CATAGACAGTCCTGCCGTGTACATGTACACTGACGACAAGCACATTATTA3280.16032455947405724No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGGAGGAACAGGGAGATGTTCTAT3250.15885817630813598No Hit
CATAGAATTGCCTACTTTGGGACCCATCGGCCGCACTGAAATTGTCTATG3230.15788058753085515No Hit
CATAGACCCACTTACACACACAGGTTTTCCGGCTTGAGGTTCTTCAACAC3200.1564142043649339No Hit
CATAGACAGAACACCACACCCCTGTCTACTTAGGAGTTCTGGCCCCTGTC3180.15543661558765307No Hit
CATAGATGCACCAGAAGCCACCTACCTACAATGGGCACACTTAACACCTC3160.1544590268103722No Hit
CATAGAGTCATTCCAAACTGTGCACTTGTCCTTGCACACCATGGATCTAT3000.1466383165921255No Hit
CATAGATCATGGGACTTCAGCATGGCACACTGACGACATGGTTCTACACA2800.13686242881931715No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTGCTACCGTAGAACAAGGGCATG2790.13637363443067674No Hit
CATAGAGGTTCTTTGTAGACTTACCTGGCAAAAGGGTAAGAGTTCTATGA2780.13588484004203633No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGGAGGCACCCCCCAGTAGGGGCA2730.13344086809883424No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCTACCGTACACCCGTAATCCCTCCC2730.13344086809883424No Hit
CATAGAATTGCCTACTTTGGGACCCACAGCCCAGTTTTCCTTCTCTATGA2700.13197448493291297No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTGCTAGAACAAGGGCATGGTCAA2660.1300193073783513No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGGAGGCACCCCCCAGCAGGGGCA2630.12855292421243003No Hit
CATAGACAGAACACCACACCCCTGTCTTAGGAGTTCTGGCCCCTGTCTAT2610.1275753354351492No Hit
CATAGAATCCCTGCCCTTGACCTTGGGAGGAACAGGGAGATGTTCTATGA2560.12513136349194712No Hit
CATAGAACTTGTGCTTTTGGTGTCACTTGATCATCCATTGTCTGCTCTAT2540.12415377471466627No Hit
CATAGATGTCCCCATTCATCCTGCAACCCCCTTCATTTTGCTGGAACTCT2490.12170980277146418No Hit
CATAGAATCCCTGCCCTTGACCTTGGTCTGTCATAAAACAATGGGCACAC2350.11486668133049832No Hit
CATAGATGTCCCCATTCATCCTGCAACCCCCCTTCATTTTGCTGGAACTC2320.11340029816457708No Hit
CATAGACCTGGTACTTCTCTTCTGGGTGCCCTGTGATTGTCCTGGTCTAT2230.10900114866681329No Hit
CATAGATGTCCCCATTCATCCTGCAACTCTCCTGGGCCCATAATACACTT2190.10704597111225163No Hit
CATAGAATCCCTGCCCTTGACCTTGGTTCTACACATAGAATCCCTGCCCT2190.10704597111225163No Hit
CATAGAATTGCCCACTTTGTTCCCTGGCTTCTCTATGAGACCAAGTCTCT2130.10411320478040911No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACTGCAAACAGAATGG2110.10313561600312829No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)