FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807653

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807653
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences46960
Sequences flagged as poor quality0
Sequence length150
%GC48

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA1974242.04003407155025No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGT17673.7627768313458265No Hit
CATAGAAAGGGACAAGGGCTCACTCTAGCCTGGGAGACATCTATGTGTAG14173.0174616695059626No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGTGTAGAACCATG8521.8143100511073256No Hit
CATAGAGCCATCATCATTTCTCACCCAGGAAAGTTGGAACCTATCAGTGT6181.3160136286201023No Hit
CATAGAACAATCAGGCACCCACCATGCTGAAGTCCCATGATCTATGTGTA5881.252129471890971No Hit
CATAGAGGCGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA5621.196763202725724No Hit
CATAGAACCAACCCTGATTCTGCTGCTCACTCTTTGGGTTCTATGTGTAG5401.1499148211243613No Hit
CATAGATCTCAAACAGCCTCTCCCAGGAAAGTTGGAACCTATCAGTGTCT5031.0711243611584327No Hit
CATAGAGCCATCATCATTTCTCACCCAGGGTAATTCTGGCCTTGTTCTAT4230.9007666098807496No Hit
CATAGATGTTGTTGTTCTGTTGCCCAATATGAACAGAAAGAAGCTCTATG4170.8879897785349233No Hit
CATAGATCTCAAACAGCCTCTCCCAGGGTAATTCTGGCCTTGTTCTATGT3870.8241056218057923No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAATTCTCTATGTG3350.7133730834752982No Hit
CATAGATGTTGTTGTTCTGTTCCCCAATATGAACAGAAAGAAGCTCTATG3030.6452299829642248No Hit
CATAGATGAAAGAGCATTGGTTGTAACACCGAAAAACACCCTCTATGTGT2900.6175468483816013No Hit
CATAGACTCACTCTGTCACCCAAGCTGGAGTGCAGTGGCGTGCTCTTGGC2620.5579216354344122No Hit
CATAGACTCACTCTGTCACCCAAGCTGGAGTGCAGTGGCTCAAACTCGGC2550.543015332197615No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAAATTCTCTTGACA2500.5323679727427598No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGAAGCTTTGAGAT2450.5217206132879045No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTATGTGTAGAACCAGAGGCAAGG2410.5132027257240205No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTGTGTGGCCAACAGGAAGGTCTA1960.4173764906303236No Hit
CATAGATGAAAGAGCATTGGTTGTGACACCGAAAAACACCCTCTATGTGT1910.4067291311754685No Hit
CATAGAAAGGGACAAGGGCTCACTCTGCTGCTCACTCTTTGGGTTCTATG1880.40034071550255534No Hit
CATAGATCTCAAACAGCCTCTCCCAGGAGACTTGGTCTCATAGATCTCAA1600.34071550255536626No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGGTAAACAAACTT1570.33432708688245316No Hit
CATAGATAGCAGCAATCTCAGGCCTGGGAGACCCCATATCTACCAAAGAT1360.28960817717206133No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAAATTCTCTTGAC1290.2747018739352641No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTACCAAAAGCACAAG1280.272572402044293No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA1210.25766609880749575No Hit
CATAGAGGGCTATCCTTGCTCAGATCAGTGTACGTGGTGTTTGGGTGTGG1200.2555366269165247No Hit
CATAGACTCACTCTGTCACCCAAGCTGGAATGCAGTGGTGCAATCTCAGC1190.25340715502555367No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA1170.24914821124361158No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGTAGAGCCTTCAGGTCA1160.24701873935264054No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAACCTGTGTATATT1140.24275979557069846No Hit
CATAGATCAAGGTGTGAGCATGGTCCTCCGATGCTTATTACATTGTTCTA1120.2385008517887564No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG1120.2385008517887564No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTATGGGAGGCTGAAACTCTAAGG1110.23637137989778534No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACATTTATCGGGAGCCACAGA1060.22572402044293013No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA950.2022998296422487No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTACTTGGTGCCATACCAAGA900.19165247018739354No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA880.18739352640545145No Hit
CATAGAGCCATCATCATTTCTCACCCAGAAGCTTTGAGATTTGTGTCTGT860.18313458262350937No Hit
CATAGATCCCTGGCAAGAATTCCTCTTCTTCCTCCTCCTGTCTATGTGTA830.17674616695059625No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA820.1746166950596252No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTCAGGAAAGTTGGAA810.17248722316865417No Hit
CATAGATGTTGTTGTTCTGTTGCCCAGGAAAGTTGGAACCTATCAGTGTC800.17035775127768313No Hit
CATAGATGCCAAGAAGAGAAAAGCAGCTTTGAGAGAAGCTTTGAGATTTG800.17035775127768313No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAAACATTTTCTGGTCAGCTGT790.1682282793867121No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGCGCCTTCAGGTCA720.15332197614991483No Hit
CATAGATGTTGTTGTTCTGTTGCCCAGGCCAGAAGCTTTGAGATTTGTGT710.15119250425894376No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAGGAAAGTTGGAACCTATC710.15119250425894376No Hit
AATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA700.14906303236797275No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA680.14480408858603067No Hit
CATAGATCCCTGGCAAGAATTCCTCAATATGAACAGAAAGAAGCTTTGAG680.14480408858603067No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA680.14480408858603067No Hit
CATAGAAAGGGACAAGGGCTCACTCTCTGCTGCTCACTCTTTGGGTTCTA680.14480408858603067No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAAGACCAAAAGCACAAGGG680.14480408858603067No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACACAGGAAAGTTGGAACCTA660.14054514480408858No Hit
CATAGAACAATCAGGCACCCACCATGCAGGCATCCCCAGTGCTCTGTCCC660.14054514480408858No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA630.1341567291311755No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGGGCCTTCAGGTCA620.13202725724020442No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTGAGGTTTCCTGGGCATCAA600.12776831345826234No Hit
CATAGATGTTGTTGTTCTGTTGCCCAGGGTAATTCTGGCCTTGTTCTATG580.12350936967632027No Hit
CATAGAGGAAAGAACAACTGCGGACGTACGGTAGCAGAAGCTTTGAGATT570.12137989778534923No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTGCTGCTCACTCTTTG550.11712095400340716No Hit
CATAGATGTTGTTGTTCTGTTGCCCACTCTTTGGGTTCTATGTGTAGAAC550.11712095400340716No Hit
CATAGAAAGGGACAAGGGCGCACTCTAGCCTGGGAGACATCTATGTGTAG540.11499148211243611No Hit
CATAGAACCAACCCTGATTCTGCTGGAGACCCCATATCTACCAAAGATCT530.11286201022146507No Hit
CATAGATGCCAAGAAGAGAAAAGCAGCCATTGTCGCCTTCTCTTCTCTAT520.11073253833049404No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGCCCGCGCAGAGCCTTCAGGTCA510.108603066439523No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGGAAAGTTGGAACCTATC480.10221465076660989No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCACAGAGCCTTCAGGTCA470.10008517887563884No Hit
CATAGAGGTGAGCGGCTGCCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA470.10008517887563884No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGTATGCAGTCTGT470.10008517887563884No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)