FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807655

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807655
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences246804
Sequences flagged as poor quality0
Sequence length150
%GC36

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCTCACAGAAACTTCCTTGATGTTCGCACCCAAGCTCTATGTGT207948.425309152201747No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCATGGAGAGAATAATCCG97453.948477334240936No Hit
CATAGAGGGGCCTGGTTATTACTTGGAGGCTGGAGAAAAAGCTCTATGTG95773.880407124681934No Hit
CATAGACCCTCTCTTACCCTTCCACCAACATGCTTTTAGTCACGTCTATG77693.1478420122850523No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGTTGAGGGAGTCTTCTCTATGTG71042.8783974327806683No Hit
CATAGAAGGAACAGCAGAGAGGGCAGGCCCTTCAGCATCATTTCTATGTG70132.841526069269542No Hit
CATAGATGAAGGCAGAAAAGGAAGAACAACAACAAAACTCGTGACTTCTA66742.7041701106951264No Hit
CATAGAATCTGGTTCAAGCACACAGTTGTGGAAAGTGCAATGAGTCTATG60762.4618725790505827No Hit
CATAGACCTCCCATGGTTCCTGATGAGCATGCCTTTGATAAAACATCTAT59442.4083888429685096No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGCTGAAGTCCCATGATCTA55202.2365925997957894No Hit
CATAGACCAGTACGCCTTACCCCTTGGAGGCTGGAGAAAAAGCTCTATGT51862.101262540315392No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCATTAGGAAGTCTTCTCAGCTT48341.95863924409653No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGATGGGAGTGTCTGCTGGTC47591.928250757686261No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA47381.9197419814913859No Hit
CATAGAAGTATTCACACTGGGGCCCAGAACCCATTGTAGATTTCTTTCAC46601.8881379556247062No Hit
CATAGATGGGACAGCGACAATGACAGTTGTGGAAAGTGCAATGAGTCTAT40541.6425989854297336No Hit
CATAGATCTCACAGAAACTTCCTTGATGAGCATGCCTTTGATAAAACATC32781.3281794460381517No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGAGCATGCCTTTGATAAAAC31461.2746957099560785No Hit
CATAGACCTCCCATGGTTCCTGATGATGGGAGTGTCTGCTGGTCTATGTG29841.2090565793098977No Hit
CATAGATGGTATTTGAGTGGGGAAACAGGCCCTTCAGCATCATTTCTATG29831.2086513994910941No Hit
CATAGAACACGAAGATTTCAGATTAGCCTCTCCAGTTTCTACGTGATCTA27091.097632129138912No Hit
CATAGACCCCATGACTCAGCTCCTCACTCTCCCACCATTCAGACTCTATG26831.0870974538500187No Hit
CATAGATTCAGTTTACTTAGAGGCAGACAGTTGTGGAAAGTGCAATGAGT25581.0364499764995705No Hit
CATAGATTCAGAGAAGGACAGCGTGGGCTGGTGTTTTCCTTGATCTATGT25371.027941200304695No Hit
CATAGATTCAGAGAAGGACAGCGTGGGTTGAGGGAGTCTTCTCTATGTGT25291.0246997617542666No Hit
CATAGATCTAGCCCATCACTTCAGCAGGCCCTTCAGCATCATTTCTATGT24250.9825610605986936No Hit
CATAGATTCCTCCAAAGACTGCAGGGTCCTAAATGTCTTTGTCCTTCTAT23250.9420430787183351No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTTGTGGAAAGTGCAATGAG18920.7666002171763828No Hit
CATAGACCCTCTCTTACCCTTCCACCCTGGGAGAAGAAATGTTGGTCTAT17060.6912367708789161No Hit
CATAGAACATTGATTCCTGGCATGTCCCATGATTTACCATCACAAATTTT15460.6264079998703425No Hit
CATAGAAGTATTCACACTGGGGCCCATTGTAGATTTCTTTCACCTCCTCT13680.5542859921233043No Hit
CATAGAGCAACCCCAGCAGTTTGAGAAAAGATGCAGTACAGCTCTATGTG13150.5328114617267143No Hit
CATAGATCTCACAGAAACTTCCTTGATGATGGGAGTGTCTGCTGGTCTAT12440.5040436945916598No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACGAATGAGGAAACAGGCACTC11790.47770700636942676No Hit
CATAGACCCCATGACTCAGCTCCTCAATCCTGTGTTCATGGCTTCTATGT11230.45501693651642594No Hit
CATAGAACATTGATTCCTGGCATGTCAGACCCAGGCTACACATCTATGTG11110.45015477869078296No Hit
CATAGACCAGTTACCACAAGAAGCAATGTGCTCGTATCTTGGCCATCTAT11000.44569780068394355No Hit
CATAGAGCAACAATGAAGGTGCATAAAAACTGTCGGAGGTCTATGTGTAG10860.4400252832206933No Hit
CATAGACCAGTTACCACAAGAAGCAATGATGGGAGTGTCTGCTGGTCTAT10490.42503362992496074No Hit
CATAGATTCCTCCAAAGACTGCAGGGGTCCTAAATGTCTTTGTCCTTCTA9490.3845156480446022No Hit
CATAGATCTAGCCCATCACTTCAGCATCATATGCCTGGCCAACTGTTTTT9160.3711447140240839No Hit
CATAGATTCTTTCCTGGCTGTGGGTGCATAAAAACTGTCGGAGGTCTATG9060.36709291583604803No Hit
CATAGAACACGAAGATTTCAGATTAGCCTTCCTTTCAATAGCCTTTTAGG8650.3504805432651011No Hit
CATAGATGGCCCAGAATCCTTTGTAGATTTCTTTCACTCTCCCACCATTC8510.3448080258018509No Hit
CATAGACCAGTTACCACAAGAAGCAATGCCTGGCCAACTGTTTTTTCTAT8410.34075622761381497No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTGTTACAAAAATTGGGAA7560.3063159430155103No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTACCCTGGGAGAAGAAAT7430.3010486053710637No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAACCATGT7410.30023824573345653No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTGGGCTGGTGTTTTCCT6800.2755222767864378No Hit
CATAGATGGCCCAGAATCCTTTGTAGAACCATGTGGGTCCTAAATGTCTT6690.2710652987795984No Hit
CATAGATCTCCTCTCTGTAATGCACCAGCCCGTTCTCTCTGTTGTGTCTA6570.26620314095395536No Hit
CATAGACCAGTACGCCTTACCCCTTGCATTAGGAAGTCTTCTCAGCTTCT6480.2625565225847231No Hit
CATAGAAGCATCCAGGTTTCTCATTTGTGATGCCTGGCCAACTGTTTTTT6300.25526328584625857No Hit
CATAGACCAGTTACCACAAGAAGCAATGGGTCATTGTGAGGATTAAATGT6260.2536425665710442No Hit
CATAGAGCAACCCCAGCAGTCTGAGAAAAGATGCAGTACAGCTCTATGTG5460.22122818106675743No Hit
CATAGACCCTCTCTTACCCTTCCACCTTCCTTTCAATAGCCTTTTAGGTC5450.22082300124795384No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTACGAATGAGGAAACAGGCA5360.21717638287872157No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTACACTGTCATTGTGGGTTTTAAC5350.21677120305991798No Hit
CATAGATTCAGAGAAGGACAGCGTGGTCACATAGGTTGCTAGACAGATTT5280.2139349443282929No Hit
CATAGATTCAGAGAAGGACAGCGTGGGTCCTAAATGTCTTTGTCCTTCTA5270.21352976450948932No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTATGCCTGGCCAACTGTTTTTTCT5010.20299508922059611No Hit
CATAGAGGCTGCAGTGAACAATGATCGGTGTAAAGGCTGGGGTCTTGGGT4960.20096919012657816No Hit
CATAGACCAGTACGCCTTACCCCTTGACACTGACCAACATGCTTTTAGTC4890.19813293139495308No Hit
CATAGATGGGACAGCGACAATGACAGTGTATGTGCTCGTATCTTGGCCAT4730.1916500542940957No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTGTAAAGGCTGGGGTCT4510.18273609828041684No Hit
CATAGAAGAAGAGGGTGTGGGGAAGGTGGGTCCTAAATGTCTTTGTCCTT4480.18152055882400608No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTATGATGGGAGTGTCTGCTGGTCT4330.17544286154195232No Hit
CATAGATCTAGCCCATCACTTCAGCATGGGCTGGTGTTTTCCTTGATCTA4310.17463250190434515No Hit
CATAGATGGGACAGCGACAATGACAGGGTCCTAAATGTCTTTGTCCTTCT4250.17220142299152363No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCCTGGGAGAAGAAATGTT4210.17058070371630932No Hit
CATAGAACAACTTGCTCTAATACTTGGGAGGATATGATGGGAGTGTCTGC4160.1685548046222914No Hit
CATAGATGACATGGGAAATTATGCTGCTCTAATGTGCTCGTATCTTGGCC4140.1677444449846842No Hit
CATAGATCTCCTCTCTGTAATGCACCAACATGCTTTTAGTCACGTCTATG4120.16693408534707702No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTGCATAAAAACTGTCGGAG4050.16409782661545194No Hit
CATAGATCTCCTCTCTGTAATGCACCAGCTTGGTCTGAGAAAAGATGCAG3970.16085638806502325No Hit
CATAGACCAGTTACCACAAGAAGCAATGAGCATGCCTTTGATAAAACATC3970.16085638806502325No Hit
CATAGATCTAGCCCATCACTTCAGCACTCTCCCACCATTCAGACTCTATG3780.15315797150775515No Hit
CATAGATGGTATTTGAGTGGGGAAACAGATGAGCATGCCTTTGATAAAAC3710.15032171277613005No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACGAATGAGGAAACAGGCAC3710.15032171277613005No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCACCCTGGGAGAAGAAATGTTG3700.14991653295732646No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTCTATGTGTAGAACCATG3670.1487009935009157No Hit
CATAGATGGCAAATGGTGGGATCTCTGAGACCAGGGTCCTAAATGTCTTT3620.1466750944068978No Hit
CATAGACCAGTACGCCTTACCCCTTGTCAGACCCAGGCTACACATCTATG3600.14586473476929063No Hit
CATAGATTCCTCCAAAGACTGCAGGCCCTTCAGCATCATTTCTATGTGTA3500.14181293658125477No Hit
CATAGATGGCAAATGGTGGGATCTCTATGTGTAGAACCATGTCGTCAGTG3450.13978703748723684No Hit
CATAGACCAGTACGCCTTACCCCTTGGGCTGGTGTTTTCCTTGATCTATG3380.13695077875561174No Hit
CATAGATGGCAAATGGTGGGATCTCTATGTTGTTACAAAAATTGGGAAGC3360.13614041911800456No Hit
CATAGAACACCTGAACTACATAGCGGACTGTTAATATAGAAGAGACACAC3290.1333041603863795No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTGCATGTTGTCTTTATGGTGTCCT3230.13087308147355797No Hit
CATAGATCTAGCCCATCACTTCAGCAGGGTCCTAAATGTCTTTGTCCTTC3180.12884718237954004No Hit
CATAGATGGCCCAGAATCCTTTGTAGATTTGGTGCTGGAATAGTTGGACT3160.12803682274193287No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTTAGTGGGACAGCATCT3120.12641610346671853No Hit
CATAGATGGCCCAGAATCCTTTGTAGACCATGGAGAGAATAATCCGTCTA2960.11993322636586116No Hit
CATAGACCAGTACGCCTTACCCCTTGTTCTACACGAATGAGGAAACAGGC2850.11547624835902173No Hit
CATAGACCAGTTACCACAAGAAGCAATGACACTGACCAACATGCTTTTAG2840.11507106854021815No Hit
CATAGACCAGTACGCCTTACCCCTTGCATGGTGCTGGAATAGTTGGACTC2820.11426070890261097No Hit
CATAGATCTCCTCTCTGTAATGCACCAGGGTCCTAAATGTCTTTGTCCTT2790.11304516944620022No Hit
CATAGATGAAGGCAGAAAAGGAAGAACATCGCCATGCTGAAGTCCCATGA2670.10818301162055721No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTACAGTTGTGGAAAGTGC2630.10656229234534285No Hit
CATAGAATCTGGTTCAAGCACACAGTGATGTGCTCGTATCTTGGCCATCT2630.10656229234534285No Hit
CATAGACCAGTACGCCTTACCCCTTGGCTGTCTCCTCACTCTCCCACCAT2570.10413121343252135No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGCTGGTGTTTTCCTTGATCTATG2560.10372603361371777No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)