FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807658

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807658
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences132153
Sequences flagged as poor quality0
Sequence length150
%GC41

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG1498611.339886343859012No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTCATCTATGA57554.354800874743668No Hit
CATAGAGTCTGGAGGAAGGTGTCAGCCTCCAGACTCAACCCTTCTATGAG41543.1433262960356556No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCCTTTCCTCAGTTCTTTTTCTA39352.97760928620614No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGACACTTTGGACTCTGCCTCTA37542.840646826027408No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGCAGCAACAAAAGTCACTCCTCT28452.152807730433664No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACAGCTAAAAATCTTGGAG25471.9273115252775193No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTAACTTCATAGCACATCAT23941.8115366279993643No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTGGAGAGAAATGCTGCTCTATGAG20431.5459353930671267No Hit
CATAGATCACCCAGCCCATATTGCACAACTGGCATCTGGTGATCTATGAG14001.0593781450288682No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAGTGGCTCACACCTATAATCCCA13791.0434874728534351No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGGTGGCTCACACCTATAATCCCA13541.0245700059779195No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGCCGCTCACCTCTATGAGACCAA11650.8815539563990223No Hit
CATAGATGTGCCACATACCTTTCCCAGGACACTTTGGACTCTGCCTCTAT11490.8694467775986925No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAACAAGATCGTGCCTCTATGAGAC11320.8565829001233418No Hit
CATAGAAGGAGCTGGACTGGATGGACTACAAGTACCCACCACCTCTATGA10810.8179912676972902No Hit
CATAGAATACAACACACTCTCTGCCCTGTTCACTCTGATGGTACTTCTAT10750.8134510756471666No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCTAACTTCATAGCACATCATGTCT10310.7801563339462593No Hit
CATAGAATACAACACACTCTCTGCCCTGCACATCTACAAGGACACTCATC9160.693135986318888No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACATTAGCTTAGTTAATTA9030.6832989035436199No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAGCAAACTAACACAGAAA8850.6696783273932487No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTAATGGAGGAGTATGGGATCTAT8750.6621113406430426No Hit
CATAGAGAACAGCCCTGAGAGAATGCGAGAACAGCTAAAAATCTTGGAGC8480.6416804764174858No Hit
CATAGATGGAAATTTTTGGCCAGGCGTGGTGGCTCACACCTATAATCCCA8390.6348701883423002No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGTCAGCCTCCAGACTCAACCCTT8050.6091424333915991No Hit
CATAGATGCCTCAAAGAGCTGGAGACAGCCGCTCACCTCTATGAGACCAA7510.5682807049404857No Hit
CATAGACCTGTGTGTGAGGCATTGTTCCAGATCCTTGTCAACTCTTGGTC7370.5576869234901969No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTGGGGAAAGAGAGCACTCTATGA7210.545579744689867No Hit
CATAGATGCCTCAAAGAGCTGAAGACATGTGTGAGAGGGAAGGACTCTAT7150.5410395526397433No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGACATAGAACAGCTAAAAATC6450.4880706453882999No Hit
CATAGACGGGCCAGAGAATAGTGCTAGGGTGGGGAAAGAGAGCACTCTAT6240.47217997321286687No Hit
CATAGATTTGTGTGAGAAGGAGCAAGAATTTGCAAATACAGAATCAGTGA6120.46309958911261945No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGACCAAAGCTAGAAACTCCCA5960.4509924103122896No Hit
CATAGATGTGGTCTCAGTGCCCTATGCAGCAACAAAAGTCACTCCTCTAT5820.4403986288620009No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTTGGAGAGAAATGCTGCTCTAT5720.43283164211179465No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTGCTACCGTATGGTGGAGGGCT5700.4313182447617534No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTTGGAGAGAAATGCTGCTCTAT5680.4298048474117122No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCGAGGCAGAGGACAGGTATC5670.42904814873669156No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAAGGGTGGGGAAAGAGAGCAC5630.4260213540366091No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTACAGTGAAACAAGATCGTGCC5520.41769766861138224No Hit
CATAGACCTGTGTGTGAGGCATTGTTAGGGTAATGGAGGAGTATGGGATC5420.41013068186117607No Hit
CATAGAGAACAGCCCTGAGAGAATGCTGCCTGTTCACTCTGATGGTACTT5210.394240009685743No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGAATTTGCAAATACAGAATCAGTG5060.38288952956043376No Hit
CATAGATGCTTCTGATATGTTGCCGTAGATGCTCAGATCTCAAAAGGCTT4930.3730524467851657No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTGCTGAGATTGGCCTGTGTCT4870.36851225473504196No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGACACTTTGGACTCTGCCTCTATGA4740.3586751719597739No Hit
CATAGAGGCAGGTGGGTGGTGGAGGGCTTTGCTGTTTCTATGAGACCAAG4730.3579184732847533No Hit
CATAGATGCTTCTGATATGTTGCCGTAGGGTGGGGAAAGAGAGCACTCTA4640.3511081852095677No Hit
CATAGAACATCTACAGAACTCTCTACCCACCTGCCTCTTGTAGAAGGGAT4630.35035148653454706No Hit
CATAGAGAACAGCCCTGAGAGAATGCTACGGTCATTCTTCTCTGGGGGCT4500.340514403759279No Hit
CATAGACTCTGTTTTGCTACCTGGGGGCTCGGTCATTCTTCTCTGGGGGC4470.33824430773421715No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGCTTTGCTGTTTCTATGAGACCAAG4150.31402995013355733No Hit
CATAGATGTGCCACATACCTTTCCCAACTTAGCAACCTGTACATTTCGTC4060.30721966205837176No Hit
CATAGACCAGCAGTTCTACTCCTAGATATACATGTGTGAGAGGGAAGGAC3970.3004093739831861No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTAGTTTTGGTAGAGACAGGGT3850.2913289898829387No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCAAGTCTCTGC3830.28981559253289746No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGGTGGGGAAAGAGAGCACTCTATG3750.28376200313273253No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGGGTGGGGAAAGAGAGCACTCTA3730.2822486057826913No Hit
CATAGATGATCCATCTACCTCTGCTTCAACACTGACGACATGTGTGAGAG3550.26862802963232013No Hit
CATAGACTCTGTTTTGCTACCTGGGGAGAGGAGGGGGCAGAATATCTATG3520.2663579336072583No Hit
CATAGAATACAACACACTCTCTGCCCTGGAGGTAGGAGGGTAATGGAGGA3500.26484453625721704No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTATAGACCAAAGCTAGAAACTC3490.2640878375821964No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGACCAAAGCTAGAAACTCCCATCT3490.2640878375821964No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGGTAATGGAGGAGTATGGGATC3480.26333113890717574No Hit
CATAGATGCTTCTGATATGTTGCCGTAGCAAACTAACACAGAAACAGAAA3460.26181774155713455No Hit
CATAGATGCTTCTGATATGTTGCCGTATGGTGGAGGGCTTTGCTGTTTCT3440.2603043442070933No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAATTTGCAAATACAGAATCA3410.2580342481820314No Hit
CATAGATGCTTCTGATATGTTGCCGTAGGCTGAGAAAGGAGGATCACTCT3370.255007453481949No Hit
CATAGAACATCTACAGAACTCTCTACCCAGGTGCAAATTGTCAGTGTGTC3340.2527373574568871No Hit
CATAGACTCTGTTTTGCTACCTGGGGCTGAGAAAGGAGGATCACTCTATG3330.2519806587818665No Hit
CATAGATGTGCCACATACCTTTCCCAGTGTACGGAGATAGAGAGGTTGGT3290.24895386408178402No Hit
CATAGACCCCATGTGCAGTGTAAGCTGTCCAGTGAACTCAAGGGGGTCTA3280.24819716540676337No Hit
CATAGATGCTTCTGATATGTTGCCGTATAGATGCTCAGATCTCAAAAGGC3260.24668376805672215No Hit
CATAGAATACAACACACTCTCTGCCCTGTACACGGACTACAAGTACCCAC3200.24214357600659842No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGACACTTTGGACTCTGCCT3150.2383600826314953No Hit
CATAGAAGGAGCTGGACTGGATGGACCTAGAGGCTATTACACTTAGCAAA3130.23684668528145408No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTGTGCCTCTTGTAGAAGGGATG3090.2338198905813716No Hit
CATAGAACAGTAAGTCAGCTCCTCCTACGGTCCAGTGAACTCAAGGGGGT3030.22927969853124788No Hit
CATAGATGCTTCTGATATGTTGCCGTAGATTTACTGACATGGGCAATTCG3030.22927969853124788No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGACCAAAGCTAGAAACTCCC2990.2262529038311654No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGCAAACTAACACAGAAACA2960.22398280780610352No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGAACATTAGCTTAGTTAATTAGGG2880.21792921840593857No Hit
CATAGACCAAAGCTAGAAACTCCCATCTATGAGACCAAGTCTCTGCTACC2770.20960553298071177No Hit
CATAGATGCTTCTGATATGTTGCCGTAGCCTGTTCACTCTGATGGTACTT2760.20884883430569112No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGACACTTTGGACTCTGCCTCTATG2730.20657873828062925No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCTACGGAGATAGAGAGGTTGGTT2700.20430864225556739No Hit
CATAGAAGGAGCTGGACTGGATGGACCTGGAAGCCATTATCCTAAGCAAA2700.20430864225556739No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTCTGCTACCGTAGGTCATTCT2700.20430864225556739No Hit
CATAGAGAACAGCTAAAAATCTTGGAGCTCTATGAGACCAAGTCTCTGCT2660.20128184755548495No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGGTACTTTTGGTAGAGACAGGG2610.19749835418038184No Hit
CATAGATGCTTCTGATATGTTGCCGTAGAACAGCTAAAAATCTTGGAGCT2600.1967416555053612No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGTGCAAACTAACACAGAAA2580.19522825815531997No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGTTGGTGGAGGGCTTTGCT2570.19447155948029937No Hit
CATAGACTCTGTTTTGCTACCTGGGGTAGACATGTGTGAGAGGGAAGGAC2560.19371486080527872No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTATTTTTGGTAGAGACAGGGT2550.1929581621302581No Hit
CATAGAACAGCTAAAAATCTTGGAGCTCTATGAGACCAAGTCTCTGCTAC2530.19144476478021688No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTGTCTGGTGGAGGGCTTTGCTGTT2530.19144476478021688No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCTCTAACTTCATAGCACATCATG2520.19068806610519623No Hit
CATAGACCACCGTGCCCAGATAAGTTGCCTTTCCTCAGTTCTTTTTCTAT2510.18993136743017563No Hit
CATAGAGAACAGCCCTGAGAGAATGCTGCTCTATGAGACCAAGTCTCTGC2490.1884179700801344No Hit
CATAGAACAGTAAGTCAGCTCCTCCTGATGCCTCTTGTAGAAGGGATGGT2440.18463447670503128No Hit
CATAGATGTGGTCTCAGTGCCCTATGCCTCGAGGCAGAGGACAGGTATCT2400.1816076820049488No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTATACTCTCAGTTGTGTGTGT2340.17706748995482507No Hit
CATAGATGCTTCTGATATGTTGCCGTTGCCTTTCCTCAGTTCTTTTTCTA2320.17555409260478386No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAACAGGGTGGGGAAAGAG2290.173283996579722No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGACCAAGTCACTCTCAGTTGTGTG2290.173283996579722No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAAGGGTGGGGAAAGAGAG2200.1664737085045364No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGTGAAACAAGATCGTGCCTCTAT2160.16344691380445392No Hit
CATAGACAGCTGGGGTGGGAGGTTAGTTGCCTTTCCTCAGTTCTTTTTCT2130.16117681777939205No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCTACACAGTGAAACAAGATCGT2120.16042011910437146No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGGGTAATGGAGGAGTATGGGATCT2110.15966342042935083No Hit
CATAGAGGATCCCCTGACATTTTGGTTGGTGGAGGGCTTTGCTGTTTCTA2070.15663662572926834No Hit
CATAGATGCTTCTGATATGTTGCCGTAAGAACAGCTAAAAATCTTGGAGC2040.15436652970420647No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTTAGATGCTCAGATCTCAAAAG2040.15436652970420647No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTACACTGACGACATGCAGCAAC2040.15436652970420647No Hit
CATAGATGCTTCTGATATGTTGCCGTACTCCCTCATTATCCCTGTGCCTC2030.15360983102918588No Hit
CATAGATGATCCATCTACCTCTGCTTCACCACAGCACAACTGGCATCTGG2000.151339735004124No Hit
CATAGAACAGTAAGTCAGCTCCTCCTATGTGTACTCTCAGTTGTGTGTGT1970.14906963897906217No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGAGAATTTGCAAATACAGA1960.14831294030404152No Hit
CATAGAATACAACACACTCTCTGCCCTGTGCCTCTTGTAGAAGGGATGGT1960.14831294030404152No Hit
CATAGATGCTTCTGATATGTTGCCGTAACAGTGAAACAAGATCGTGCCTC1960.14831294030404152No Hit
CATAGAGAACAGCCCTGAGAGAATGCCATAGAGAACAGCTAAAAATCTTG1890.1430160495788972No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTAGCAAACTAACACAGAAACAGAA1870.14150265222885594No Hit
CATAGATGATCCATCTACCTCTGCTTCATAGCACAACTGGCATCTGGTGA1860.14074595355383532No Hit
CATAGACTCTGTTTTGCTACCTGGGGGGTGGTGGAGGGCTTTGCTGTTTC1860.14074595355383532No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTGACCACACGCACAACTGGCAT1850.13998925487881472No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGATGGCTCACACCTATAATCCCA1830.13847585752877345No Hit
CATAGATGCTTCTGATATGTTGCCGTACCTCTAACTTCATAGCACATCAT1820.13771915885375285No Hit
CATAGACTCTGTTTTGCTACCTGGGGTCATTCTTCTCTGGGGGCTCTATG1790.13544906282869099No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTTTGGACTCT1790.13544906282869099No Hit
CATAGATGTGGTCTCAGTGCCCTATGCCTACGAATGGTTCTACAATAGAA1780.13469236415367036No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTAGGCACAGGGTAATGGAGGAG1750.13242226812860852No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTAAGAACATTAGCTTAGTTAATTA1670.12636867872844354No Hit
CATAGAAGGAGCTGGACTGGATGGACCTGGAAGCCGTTATCCTCAGCAAA1640.12409858270338169No Hit
CATAGATGATCCATCTACCTCTGCTTCATAGCACATCAGACCAAAGCTAG1630.12334188402836108No Hit
CATAGATGTGCCACATACCTTTCCCAACACGGACTACAAGTACCCACCAC1600.12107178800329921No Hit
CATAGACCTGTGTGTGAGGCATTGTTGTCAGTGTGCACAACTGGCATCTG1590.12031508932827858No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTATAGACCAAAGCTAGAA1590.12031508932827858No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGAGGATAGACCAAAGCTAGAAACTC1570.11880169197823734No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTGTTCACTCTGATGGTACTTCT1560.11804499330321672No Hit
CATAGACTCTGTTTTGCTACCTGGGGTGGGGAAAGAGAGCACTCTATGAG1560.11804499330321672No Hit
CATAGATGCTTCTGATATGTTGCCGTACACTGACGACATGGTTCTACACA1560.11804499330321672No Hit
CATAGATGCCTCAAAGAGCTGAAGACACAGCACACTACTCTCAGTTGTGT1550.11728829462819611No Hit
CATAGAATACAACACACTCTCTGCCCTGCTGAGATTGGCCTGTGTCTATG1530.11577489727815486No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAAGCAAACTAACACAGAA1530.11577489727815486No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTCTGCTACCGTGCAAACTAAC1510.11426149992811363No Hit
CATAGAACATCTACAGAACTCTCTACCCATAGAGGTGGTGGAGGGCTTTG1510.11426149992811363No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTGGGGGCAGACCAAAGCTA1500.11350480125309301No Hit
CATAGAACAGTAAGTCAGCTCCTCCTACACTGACGACATGTGTGAGAGGG1500.11350480125309301No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTATGAGACCAAGTCTCTGCTA1490.1127481025780724No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCTCAGCACAGTGAAACAAGATC1480.11199140390305176No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCAAGAACATTA1470.11123470522803114No Hit
CATAGATGCTTCTGATATGTTGCCGTAAGAATTTGCAAATACAGAATCAG1430.10820791052794866No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTTGTATTTTTGGTAGAGACAGG1400.10593781450288679No Hit
CATAGACCCCATGTGCAGTGTAAGCTAGAAACTCCCATCTATGAGACCAA1350.10215432112778369No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCACACTGACGACATGGTTCTACA1350.10215432112778369No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTTACGGTAGCACAACTGGCAT1340.10139762245276308No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCACATAGAGAACAGCTAAAAATC1330.10064092377774247No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTACACATAGAACAGCTAAAAA1330.10064092377774247No Hit
CATAGACCACCGTGCCCAGATAAGTTACACTGACGACATGTGTGAGAGGG1330.10064092377774247No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)