FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807664

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807664
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences180252
Sequences flagged as poor quality0
Sequence length150
%GC40

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG4487424.895146794487715No Hit
CATAGAGAATTTGCACACCACGGGACATGGATGAAGCTGGATCTATGAGA130337.230432949426359No Hit
CATAGATGTCTCCCAGGCTAGAGTGAGCCCTTGTCCCTTTCTATGAGACC95075.274282670927368No Hit
CATAGACCTTCCTGTTGGCCACACAGAATTAGCGGAGAGTGAGAACTCTA60183.338659210438719No Hit
CATAGATCATGGGACTTCAGCATGGTGGGTGCCTGATTGTTCTATGAGAC58963.270976188891108No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAATCAGGGTTGGTTCTATGAGACC58013.2182721967023946No Hit
CATAGAGGGTGTTTTTCGGTGTTACAACCAATGCTCTTTCATCTATGAGA55213.0629341144619753No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAACAGAACAACAACATCTATG52532.9142533786032887No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGCAACAGAACAACAACATCTATG49052.7211903335330536No Hit
CATAGAGGGTGTTTTTCGGTGTCACAACCAATGCTCTTTCATCTATGAGA48212.6745889088609283No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGTGAGAAATGATGATGGCT38402.1303508421543174No Hit
CATAGAGAATTTGCACACCACGGGACCATGCTCACACCTTGATCTATGAG30161.67321305727537No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCAGGCCTGAGATTGCTGCTAT21871.2133013780707012No Hit
CATAGAACAAGGCCAGAATTACCCTGGGTGAGAAATGATGATGGCTCTAT20711.148947029713956No Hit
CATAGAACAAGGCCAGAATTACCCTGGGAGAGGCTGTTTGAGATCTATGA20381.1306393271641924No Hit
CATAGACCACACCCAAACACCACGTACACTGACGACATGGTTCTACACAT16240.90096087699443No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAACAACAACATCTATGAGACCAAG15230.8449282116148503No Hit
CATAGACAGCTGACCAGAAAATGTTTCAGACATGTTTCCTAGTTTCAGTT14280.7922242194261366No Hit
CATAGACAGGAGGAGGAAGAAGAGGAATTCTTGCCAGGGATCTATGAGAC14210.7883407673701264No Hit
CATAGAACCCAAAGAGTGGGCAACAGAACAACAACATCTATGAGACCAAG13610.7550540354614651No Hit
CATAGACAGCTCACAGACTGCATACTACACTGACGACATGGTGGGTGCCT11600.6435434835674501No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGAGAGGCTGTTTGAGATCT11440.6346670217251404No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGATCTGAGCAAGGAT11000.6102567516587889No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACATGGATGAAGC9610.5331424894037237No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTCAGACATGTTTCCTAGTTT9320.5170539023145374No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGTGAGCCCTTGTCCCTTTCTATG9160.5081774404722278No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTCTATGAGGCAGTCTCAAACG8070.44770654417149325No Hit
CATAGACTTGATGCCCAGGAAACCTCCTGCCCCTGCAGGCTGAAAGTGCC7670.4255153895657191No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTCTATGAGACCAAGACTTCAG7560.4194128220491312No Hit
CATAGATTAGTTCTTATTCTTGGTATGGCACACTCAGACATGTTTCCTAG7230.40110511949936756No Hit
CATAGACAGCTGACCAGAAAATGTTTCAGTGTAGAATTAGCGGAGAGTGA7110.3944477731176353No Hit
CATAGACAGCTCACAGACTGCATACTACACTGACTCTTCACTATGTCATC6890.3822426380844595No Hit
CATAGAACAATGTAATAAGCATCGGAGGAGGCCTGAGATTGCTGCTATCT6390.35450369482724187No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTGACGACATGGTGGGTGCCT5590.3101213856156936No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGTGCTCATACAGAATTAGATC4480.24854093158467033No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTGATCTTCTCGGCAGTGAGGTA4420.24521225839380423No Hit
CATAGATTAGTTCTTATTCTTGGTATGGCACTAGATGTCCCCCAGTATTT4400.24410270066351553No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTCTATGAGCCCCCAGTATTTC4090.22690455584404057No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACCATGCTCACAC4050.22468544038346314No Hit
CATAGATGTCTCCCAGGCTAGAGTGCGCCCTTGTCCCTTTCTATGAGACC4030.22357588265317446No Hit
CATAGAGAATTTGTACACCACGGGACATGGATGAAGCTGGATCTATGAGA3890.2158089785411535No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGAGTGAGCCCTTGTCCCTTTCTA3840.2130350842154317No Hit
CATAGAACCCAAAGAGTGAGCCCTTGTCCCTTTCTATGAGACCAAGTCTC3730.20693251669884385No Hit
CATAGAACAAGGCCAGAATTACCCTGCACTGAGGAATTCTTGCCAGGGAT3570.19805605485653416No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGAGGAATTCTTGCCAGGGATC3520.1952821605308124No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGCTACCGTAGGGTGGTCTTAC3230.17919357344162617No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCAGGCAGTCTCAAACGTTGTG3060.16976233273417216No Hit
CATAGAGAAGAGAAGGCGACAATGGCAGTCTCAAAAGGCAGTCTCAAACG3010.1669884384084504No Hit
CATAGACAGGAGGAGGAAGAAGAGGAGGGACATGGATGAAGCTGGATCTA2950.16365976521758427No Hit
CATAGACAGCTCACAGACTGCATACTACACTGGAGACAGCCGCTCACCTC2940.16310498635243992No Hit
CATAGATGTCTCCTAGGCTAGAGTGAGCCCTTGTCCCTTTCTATGAGACC2760.15311896677984155No Hit
CATAGACTTGATGCCCAGGAAACCTCTTGAGGGACATGGATGAAGCTGGA2700.14979029358897544No Hit
CATAGAGCAAAAGAGAAACATTAAGCCATAGTACACTGACTCTTCACTAT2640.1464616203981093No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGACCATGCTCACACCTTGAT2590.14368772607238756No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCACTGACGACATGGTTCTACACAT2560.14202338947695448No Hit
CATAGAGCTTCTTTCTGTTCATATTGAGGAATTCTTGCCAGGGATCTATG2520.13980427401637707No Hit
CATAGAGGGTGTTTTTCGGTGTCACAGATCTATGGCCGCTAAGCCGAGAA2470.13703037969065532No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGACACTGAGGAATTCTTGCCA2430.1348112642300779No Hit
CATAGAGAAGAGAAGGCGACAATGGGACATGGATGAAGCTGGATCTATGA2320.12870869671349No Hit
CATAGAGAAGAGAAGGCGACAATGGCGTCAGTGTTGTGCTCATACAGAAT2300.1275991389832013No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAACCCAAAGAGTGAGCCCTTGTCC2250.12482524465747952No Hit
CATAGATGTCTCCCAGGCTAGAGTGCTCATACAGAATTAGATCTAGCTCT2240.12427046579233517No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCAGGCTAGAGTGAGCCCTTGT2220.12316090806204648No Hit
CATAGAGGGCCAGAAGTTTGTTTACCTACACTGACGACATGGTGGGTGCC2150.11927745600603601No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG2110.11705834054545856No Hit
CATAGAGAATTTGCACACCACGGGACTTCAGTTGACTATAAGAAACACCT2080.11539400395002553No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAATTCTTGCCAGGGATCTATG2070.11483922508488116No Hit
CATAGACAGGAGGAGGAAGAAGAGGAGGCCTGAGATTGCTGCTATCTATG1990.11040099416372634No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG1930.10707232097286021No Hit
CATAGAATGCAGGAGAATATACACAGGTTACACTGACGACATGGTGGGTG1910.10596276324257152No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATCTGGACCTGCG1880.10429842664713845No Hit
CATAGAACAAGGCCAGAATTACCCTGTGCTCATACAGAATTAGATCTAGC1830.1015245323214167No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)