FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807665

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807665
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences180252
Sequences flagged as poor quality0
Sequence length150
%GC40

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA4495024.937309988238688No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGT133387.3996405032953865No Hit
CATAGAAAGGGACAAGGGCTCACTCTAGCCTGGGAGACATCTATGTGTAG105155.833499766992876No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTGTGTGGCCAACAGGAAGGTCTA60513.356966912988483No Hit
CATAGAACAATCAGGCACCCACCATGCTGAAGTCCCATGATCTATGTGTA59893.3225706233495327No Hit
CATAGAACCAACCCTGATTCTGCTGCTCACTCTTTGGGTTCTATGTGTAG58693.2559971595322104No Hit
CATAGATGAAAGAGCATTGGTTGTAACACCGAAAAACACCCTCTATGTGT56973.1605751947273815No Hit
CATAGATGTTGTTGTTCTGTTCCCCAATATGAACAGAAAGAAGCTCTATG53742.9813816212857556No Hit
CATAGATGTTGTTGTTCTGTTGCCCAATATGAACAGAAAGAAGCTCTATG51742.8704258482568847No Hit
CATAGATGAAAGAGCATTGGTTGTGACACCGAAAAACACCCTCTATGTGT49092.723409448993631No Hit
CATAGAGCCATCATCATTTCTCACCCAGGAAAGTTGGAACCTATCAGTGT38642.1436655349177816No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAATTCTCTATGTG31031.7214788185429288No Hit
CATAGATAGCAGCAATCTCAGGCCTGGGAGACCCCATATCTACCAAAGAT22151.228835186294743No Hit
CATAGAGCCATCATCATTTCTCACCCAGGGTAATTCTGGCCTTGTTCTAT21121.1716929631848745No Hit
CATAGATCTCAAACAGCCTCTCCCAGGGTAATTCTGGCCTTGTTCTATGT21061.1683642899940083No Hit
CATAGATGTTGTTGTTCTGTTGCCCACTCTTTGGGTTCTATGTGTAGAAC15430.8560237889177374No Hit
CATAGATGTTGTTGTTCTGCTGCTCACTCTTTGGGTTCTATGTGTAGAAC14890.8260657301999423No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAAACATTTTCTGGTCAGCTGT14880.8255109513347979No Hit
CATAGATCCCTGGCAAGAATTCCTCTTCTTCCTCCTCCTGTCTATGTGTA14150.7850120941792601No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGTGTAGAACCATG12290.6818232252624105No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGTATGCAGTCTGT12050.6685085324989459No Hit
CATAGATCTCAAACAGCCTCTCCCAGGAAAGTTGGAACCTATCAGTGTCT11530.6396600315114396No Hit
CATAGAGGGCTATCCTTGCTCAGATCAGTGTAGAAGCTTTGAGATTTGTG10980.6091471939285No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAAATTCTCTTGACA9730.539799835785456No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAGTGTACCAAAAGCACAAGGG9690.5375807203248785No Hit
CATAGAAAGGGACAAGGGCTCACTCTGCTGCTCACTCTTTGGGTTCTATG9540.5292590373477132No Hit
CATAGACACAACGTTTGAGACTGCCTCATAGAGAAGCTTTGAGATTTGTG7980.44271353438519406No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTCTTGGTCTCATAGAGAAGC7700.42717972616115213No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAGTGTGCCATACCAAGAATAA7520.4171937065885538No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTACACTGAAACATTTTCTGGTCA7350.4077624658810998No Hit
CATAGACTCACTCTGTCACCCAAGCTGGAGTGCAGTGGCGTGCTCTTGGC7090.3933382153873466No Hit
CATAGATGGTAAGATGACATAGTGAAGAGTCAGTGTAGTATGCAGTCTGT6990.387790426735903No Hit
CATAGATAGCAGCAATCTCAGGCCTCCTCCGATGCTTATTACATTGTTCT6380.3539489159620975No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTACCAAAAGCACAAG5940.329538645895746No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAGGAAAGTTGGAACCTATC4560.2529791625058252No Hit
CATAGAGAAACTTTTAATAATGAAATACTGGGGGACATCTAGTGCCATAC4490.24909571044981468No Hit
CATAGATTTCTGTACCTCACTGCCGAGAAGATCAGAGGCAAGGGTACTAT4400.24410270066351553No Hit
CATAGAGAAACTTTTAATAATGAAATACTGGGGGCTCATAGAGAAGCTTT4310.23910969087721634No Hit
CATAGAAAGGGACAAGGGCGCACTCTAGCCTGGGAGACATCTATGTGTAG4240.23522623882120589No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAAATTCTCTTGAC4110.22801411357432927No Hit
CATAGAAAGGGACAAGGGCTCACTCTCTGCTGCTCACTCTTTGGGTTCTA3950.21913765173201963No Hit
CATAGATCCCTGGCAAGAATTCCTCAGGAAAGTTGGAACCTATCAGTGTC3650.202494285777689No Hit
CATAGATCCCTGGCAAGAATTCCTCAGTGCAGGGTAATTCTGGCCTTGTT3520.1952821605308124No Hit
CATAGACACAACGTTTGAGACTGCCTGGGAGACCCCATATCTACCAAAGA3170.17586490025076004No Hit
CATAGACGGGAAGAGTAAGACCACCCTACGGTAGCAGGAAAGTTGGAACC3160.1753101213856157No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGTAGTATGCAGTCTGTGAGCTGTC3050.1692075538690278No Hit
CATAGATCCAGCTTCATCCATGTCCCTCCTCTTCTTCCTCCTCCTGTCTA2980.16532410181301732No Hit
CATAGACACAACGTTTGAGACTGCCTTTTGAGACTGCCATTGTCGCCTTC2940.16310498635243992No Hit
CATAGATGGTAAGATGACATAGTGAAGAGTCAGTGTACTATGGCTTAATG2770.1536737456449859No Hit
CATAGATCCAGCTTCATCCATGTCCCTCAAGAGGTTTCCTGGGCATCAAG2680.14868073585868674No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAAGGGAGAATCTATGTGTA2630.14590684153296496No Hit
CATAGATCCCTGGCAAGAATTCCTCAATATGAACAGAAAGAAGCTCTATG2610.14479728380267626No Hit
CATAGATCAAGGTGTGAGCATGGTCCAGGAAAGTTGGAACCTATCAGTGT2610.14479728380267626No Hit
CATAGAGATCTTCTCGGCTTAGCGGCCATAGATCTGTGACACCGAAAAAC2530.14035905288152142No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTGCTGCTCACTCTTTG2440.13536604309522224No Hit
CATAGATCCCTGGCAAGAATTCCTCAGTGTCAGGAAAGTTGGAACCTATC2420.13425648536493354No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACTCTAGCCTGGGAGACATCT2390.13259214876950046No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAACACTGACGCCATTGTCG2310.12815391784834565No Hit
CATAGATCCAGCTTCATCCATGTCCCATTGTCGCCTTCTCTTCTCTATGT2300.1275991389832013No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGGTAAACAAACTT2260.1253800235226239No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTCCCGTGGTGTGCAAATTCT2180.12094179260146905No Hit
CATAGAAAGGGACAAGGGCTCACTCTAGCCTGGGAGACCCCATATCTACC2180.12094179260146905No Hit
CATAGATCCCTGGCAAGAATTCCCCAATATGAACAGAAAGAAGCTCTATG2170.1203870137363247No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA2160.11983223487118035No Hit
CATAGATAGCAGCAATCTCAGGCCTCCTCTTCTTCCTCCTCCTGTCTATG1950.10818187870314892No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAACCTGTGTATATT1940.10762709983800457No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAGGGTAATTCTGGCCTTGT1860.10318886891684974No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA1840.10207931118656104No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGCTGCTGCTCACTCTTTGGG1810.10041497459112797No Hit
CATAGAACCAACCCTGATTCTGCTGGGGCTAGCGGGTCTCCATTAGGAGT1810.10041497459112797No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)