FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807672

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807672
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences61764
Sequences flagged as poor quality0
Sequence length150
%GC39

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAACTGAGGCTGGTAGAGGGAGGCGTGGTATGAGGGGAATCTATGA45667.392655916067612No Hit
CATAGACGCGGTATTGTCAGGAGCTAACTGGGATACTGCTCTATGAGACC42366.858364095589664No Hit
CATAGACCTGGTACTTCTCTTCTGGGTCCATTTTTGGTTCTCTTCTATGA40376.536169937180235No Hit
CATAGATTACTGGGAGACTGGCGCTCACCTCTATGAGACCAAGTCTCTGC28124.552813936921184No Hit
CATAGAGGGAAGAGAAGAGGAGCTGACATCCCAACCACACGTCTATGAGA22223.597564924551519No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGGCCCATAATACACTTTTCTAT19793.2041318567450294No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGAGGAACAGGGAGATGTTCTATG17162.778317466485331No Hit
CATAGAACTTGTGCTTTTGGTGTCACCCGTAATCCCTCCCTTTTCTATGA14652.3719318696975584No Hit
CATAGAAAAGTCACCATGCAGCCCTGTGATTGTCCTTGCACACCATGGAT14292.3136454892817824No Hit
CATAGACAGTCCTGCCGTGTACATGTACAGCCTACATCCCTCATCTATGA12101.9590700084191437No Hit
CATAGATTACTGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGCT11111.7987824622757596No Hit
CATAGAAAAGTCACCATGCAGCCCTGGCAAAAGGGTAAGAGTTCTATGAG10561.7097338255294345No Hit
CATAGAAAAGTCACCATGCAGCCCTGGGCCCATAATACACTTTTCTATGA10141.6417330483776957No Hit
CATAGACGCGGTATTGTCAGGAGCTGACTGGGATACTGCTCTATGAGACC9741.5769704034712777No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTCCTGGGCCCATAATACACTTTTC7561.2240139887312997No Hit
CATAGATGTCCCCATTCATCCTGCAAACAGAATGGGACCCATCTATGAGA7551.2223949226086395No Hit
CATAGAGGCAAGCTAACTCTGAGATCCATCAGAGCATCACCCCTTCTATG7281.1786801372968072No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCCTTGTCCTTGCACACCATGGAT6711.0863933683051616No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGCAAACAGAATGGGACCCA6591.0669645748332361No Hit
CATAGACAGTATGGGGGAAACGGCTCTCTTCCGCCTTTATCCTTCTATGA6211.005440062172139No Hit
CATAGATTACTGGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGC5840.9455346156337024No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGTGGTGCTGGAACTAGTTCTATG4890.7917233339809598No Hit
CATAGACCATGTAATACCATCGTGAGCAGTGTACAATGGGCACACTTAAC4780.7739136066316948No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCGTGTACAGCCTACATCCCTCAT4770.7722945405090345No Hit
CATAGATCATGGGACTTCAGCATGGCTCTCTTCCGCCTTTATCCTTCTAT4430.7172462923385791No Hit
CATAGAGCACCCAACTATCCTTCAGCATGAGAAGAATGGCCTCTATGAGA4270.6913412343760119No Hit
CATAGATTTGGCACTCACATACACGCACAAGCACATTATTATTGGTTGGT4230.6848649698853702No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTAC4120.6670552425361052No Hit
CATAGATGCACCAGAAGCCACCTACCGTACCAAGTATATGACACATTACA3970.6427692506961984No Hit
CATAGAATTGCCTACTTTGGGACCCATGCAAACAGAATGGGACCCATCTA3890.6298167217149148No Hit
CATAGATCATGAATGACTCCCACTCTGTAGATTATGCTCTCTTCCGCCTT3740.6055307298750081No Hit
CATAGATTACTGGGAGACTGGCGCTCTCTTCCGCCTTTATCCTTCTATGA3610.5844828702804222No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGAACAAGGGCATGGTCAA3600.5828638041577617No Hit
CATAGAATCCCTGCCCTTGACCTTGGGAGGAACAGGGAGATGTTCTATGA3320.5375299527232692No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTATAGATTATGCTCTCTTCCGCCT3230.5229583576193252No Hit
CATAGATTTGGCACTCACATACACGCTGACATCCCAACCACACGTCTATG3090.5002914319020789No Hit
CATAGATGCACCAGAAGCCACCTACCGTATTGTCCTTGCACACCATGGAT2830.4581957127129072No Hit
CATAGACAGTCCTGCCGTGTACATGTACAAACCAAACAATAGCCAGTCTA2800.45333851434492584No Hit
CATAGAAGGGCAATTATCTCATCCTAGACGAAGGGCAAGTGTATGGTCAG2790.4517194482222654No Hit
CATAGACGCGGTATTGTCAGGAGCTGACATCCCAACCACACGTCTATGAG2760.4468622498542841No Hit
CATAGATGCACCAGAAGCCACCTACCAAGTATATGACACATTACACCAGT2710.4387669192409818No Hit
CATAGAGTCATTCCAAACTGTGCACTTGTCCTTGCACACCATGGATCTAT2690.4355287869956609No Hit
CATAGACAGAACACCACACCCCTGTCCTTGTCCTTGCACACCATGGATCT2530.40962372903309374No Hit
CATAGATGTGTGAGAGAGGGAGAGACAGCCTTCTCTGATACCATCCCTCT2520.40800466291043325No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG2440.39505213392914973No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTACCAAGTATATGACACATTA2210.35781361310795934No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCCTGGGCCCATAATACACTTTTCTA2200.3561945469852989No Hit
CATAGATCTGGGAGGTGAAGAGGACAATGGGCACACTTAACACCTCTATG2190.3545754808626384No Hit
CATAGAATTGCCTACTTTGGGACCCAGCATGAGAAGAATGGCCTCTATGA2190.3545754808626384No Hit
CATAGATTTGGCACTCACATACACGCTCTCTTCCGCCTTTATCCTTCTAT2120.34324201800401527No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGACCAAGAACAAGGGCAT2100.3400038857586944No Hit
CATAGAATTGCCTACTTTGGGACCCATCGGCCGCACTGAAATTGTCTATG2050.33190855514539214No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCAAA2040.3302894890227317No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTGAGGTTCTTCAACACAGCTA1930.31247976167346675No Hit
CATAGATGTCCCCATTCATCCTGCAACGTAGAACAAGGGCATGGTCAAGT1850.2995272326921831No Hit
CATAGACCCCCATGCAACCACATCTATAGGAATTAGAGCCAGTTCTGAGT1840.2979081665695227No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCGAACAAGGGCATGGTCAAGTGTC1820.2946700343242018No Hit
CATAGAACTTGTGCTTTTGGTGTCACTTGATCATCCATTGTCTGCTCTAT1720.2784793730975973No Hit
CATAGAACTGAGGCTGGTAGAGGGAGCCTTGGAGGCCTAGCCTGGCAGCT1700.2752412408522764No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTGCAAACAGA1680.2720031086069555No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGCAAGTGTATGGTCA1630.2639077779936533No Hit
CATAGAATTGCCTACTTTGGGACCCATCTGCAAACAGAATGGGACCCATC1630.2639077779936533No Hit
CATAGAATTGCCTACTTTGGGACCCATCCCCTTCATTTTGCTGGAACTCT1550.25095524901236965No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTATTTGGGGGAAGAGAAACAG1530.24771711676704875No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAAGTATATGACACATTACACCAG1450.23476458778576517No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGGAACAAGGGCATGGTCA1430.23152645554044426No Hit
CATAGATCTGGGAGGTGAAGAGGACACCCGTAATCCCTCCCTTTTCTATG1410.22828832329512336No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGACACTGACGACAATGGGCACAC1390.22505019104980248No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTACTTAGGAGTTCTGGCCCCT1380.22343112492714204No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGCTCTCTTCCGCCTTTATCCTTC1370.22181205880448157No Hit
CATAGAATTGCCTACTTTGGGACCCAGTCACAATGGGCACACTTAACACC1340.21695486043650022No Hit
CATAGATGGCATGTCACTTCCTCAGAGCATCACCCCTTCATTTTGCTGGA1320.21371672819117932No Hit
CATAGAATTCCCCAATGTCCTGTGCAAACAGAATGGGACCCATCTATGAG1280.20724046370053756No Hit
CATAGACCCCCATGCAACCACATCTACACTGACGACATGGTTCTACACAT1240.20076419920989574No Hit
CATAGAATTGCCTACTTTGGGACCCACTTTGTTCCCTGGCTTCTCTATGA1160.18781167022861214No Hit
CATAGAATCCCTGCCCTTGTCCTTGCACACCATGGATCTATGAGACCAAG1130.1829544718606308No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTGCAAACA1100.17809727349264945No Hit
CATAGATGCACCAGAAGCCACCTACCTTCCAACTCTATAGATTATGCTCT1100.17809727349264945No Hit
CATAGACAGAACACCACACCCCTGTCCTTGCACACCATGGATCTATGAGA1060.17162100900200764No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGGAACAAGGGCATGGTCAAG1050.1700019428793472No Hit
CATAGAAAAGTCACCATGCAGCCCTGGTGAAAAGTAGGGGACAGTTCTAT950.1538112816527427No Hit
CATAGACAGAACACCACACCCCTGTCCACCACAGCCCAGTTTTCCTTCTC930.15057314940742178No Hit
CATAGACCCCCATGCAACCACATCTATCACAGGAGACACAAGAATGTTCA910.1473350171621009No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCAGAACAAGGGCATGGTCAAGTGT900.14571595103944043No Hit
CATAGAATTGCCTACTTTGGGACCCATAGGGCAAGTGTATGGTCAGTTCT890.14409688491678No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGGAGGAACAGGGAGATGTTCTAT890.14409688491678No Hit
CATAGACCTGGTACTTCTCTTCTGGGTACACTGACCACTTTGTTCCCTGG870.1408587526714591No Hit
CATAGATCATGAATGACTCCCACTCTGTTCCCTGGCAAAAGGGTAAGAGT870.1408587526714591No Hit
CATAGAATCCCTGCCCTTGACCTTGGTCATAAAACAATGGGCACACTTAA820.13276342205815686No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTGC810.1311443559354964No Hit
CATAGACCATGTAATACCATCGTGAGCAGCACCCCTTCATTTTGCTGGAA810.1311443559354964No Hit
CATAGATCTGCTCACCTAAATTTCGTTCAGTGTACAATGGGCACACTTAA790.1279062236901755No Hit
CATAGACCCACTTACACACACAGGTTTTCCGGCTTGAGGTTCTTCAACAC770.12466809144485459No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTATGAGACCAAGTTGGTGAAAAGT770.12466809144485459No Hit
CATAGAATCCCTGCCCTTGACCTTGCACACCATGGATCTATGAGACCAAG750.12142995919953371No Hit
CATAGAATTGCCTACTTTGGGACCCACTGCAAACAGAATGGGACCCATCT680.11009649634091057No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAGGGCAAGTGTATGGTCAGTTCT680.11009649634091057No Hit
CATAGAATTCCCCAATGTCCTGTGCACACCATGGATTGTCCTTGCACACC670.10847743021825011No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCTGAGGTTCTTCAACACAGCTAT660.10685836409558966No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCCCAGCATGAGAAGAATGGCCTC650.10523929797292922No Hit
CATAGATCATGGGACTTCAGCATGGCAAAAGGGCAAGTGTATGGTCAGTT640.10362023185026878No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAGTAGGATGACTTATGGAATCTG640.10362023185026878No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTATGAGCCTTCTCTGATACCATCC620.10038209960494787No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)