FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807679

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807679
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences85995
Sequences flagged as poor quality0
Sequence length150
%GC37

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATGAGTGTCCTTGTAGATGTGCAATATGGGCTGGGTGATCTATGT62537.2713529856387No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA61217.117855689284261No Hit
CATAGAGGAGTGACTTTTGTTGCTGCACCTTCCACTACCCACCTGCCTCT35634.143264143264144No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCTAGCCAAATTCCTTACCGATCTA33013.838595267166696No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCTCCAGACTCTATGTG32173.740915169486598No Hit
CATAGAGGCACGATCTTGTTTCACTGAGCTGAGGGTCACTTCTATGTGTA29883.4746206174777603No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGAATGATATTGTTGCAGAT21472.496656782371068No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACCAAAATGTCAGGGGATCCTCTA20962.43735100877958No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGTTTACTCGGAGATTTGACTG20862.4257224257224257No Hit
CATAGATGGGATTATAGGTGTGAGCCACTGCGCCTGGCCAAAAATTTCCA16281.8931333217047503No Hit
CATAGATGGGATTATAGGTGTGAGCCACCGCGCCTGGCCAAAAATTTCCA15891.847781847781848No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTATGTGTAGAACCATGTCGTCA15171.7640560497703355No Hit
CATAGAGGTGAGCGGCTGTCTTCAGCTCTTTGAGGCATCTATGTGTAGAA15121.7582417582417582No Hit
CATAGAGGTGAGCGGCTGTCTCCAGCTCTTTGAGGCATCTATGTGTAGAA15021.7466131751846037No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCATCCAGTCCAGCTCCTTCTATGT12461.4489214489214488No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGGAGCTGACTTACTGTTCT11101.2907727193441478No Hit
CATAGATGGGATTATAGGTGTGAGCCACCACGCCTGGCCAAAAATTTCCA10681.241932670504099No Hit
CATAGAGCCCCCAGAGAAGAATGACCTTGATGTGGAGGTGATGGGTGGAC10401.2093726379440666No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGGAGCTGACTTACTGTTCTATGTG9951.1570440141868712No Hit
CATAGAAACAGCAAAGCCTTCCACTACCCACCTGCCTCTATGTGTAGAAC9251.07564393278679No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTTCTGTTTACTCGGAGA9061.0535496249781964No Hit
CATAGATCACCAGATGCCAGTTGTGCAATATGGGCTGGGTGATCTATGTG9001.0465724751439036No Hit
CATAGAAACAGCAAAGCCCTCCACCACCCACCTGCCTCTATGTGTAGAAC8510.9895924181638467No Hit
CATAGAAGTACCATCAGAGTGAACAGGGCAGAGAGTGTGTTGTATTCTAT8470.9849409849409849No Hit
CATAGAGTGATCCTCCTTTCTCAGCCATGCTGAAGTCCCATGATCTATGT8370.9733124018838305No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGGGCAGAGAGTGTGTTGTATTC8170.9500552357695214No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATGTCGT7910.9198209198209197No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGGGAAAGGTATGTGGCACATCTAT6650.7733007733007733No Hit
CATAGATACCTGTCCTCTGCCTCGAGGAGAATGATATTGTTGCAGATTTC6060.7046921332635618No Hit
CATAGATCCCATACTCCTCCATTACCCTTCCACTACCCACCTGCCTCTAT5890.6849235420663992No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTCCACTACCCACCTGCCTCTATGT5870.6825978254549683No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGCAGGGCAGAGAGTGTGTTGT5850.6802721088435374No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTCAGGGCAGAGAGTGTGTTG5760.6698063840920984No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTGTTTACTCGGAGATTTGA5670.6593406593406593No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCACTACCCACCTGCCT5240.609337752194895No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAACCTCCCACCCCAGCTGTCTATG5110.5942205942205943No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACACGGCAACATATCAGAAGCATC5030.5849177277748706No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTCGTCAGTGTCAGGGCAGAG4870.5663119948834234No Hit
CATAGAGGCACGATCTTGTTTCACTGTCGTCAGTGTGGGAAAGGTATGTG4860.565149136577708No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTCCACTACCCACCTGCCTCTATGT4820.5604977033548463No Hit
CATAGACGAATTGCCCATGTCAGTAAATCTACGATAGCGAGAAGAGTGGA4650.5407291121576836No Hit
CATAGATGGGATTATAGGTGTGAGCCATGCTGAAGTCCCATGATCTATGT4370.508169079597651No Hit
CATAGATCCCATACTCCTCCATTACCCTGTGCCTCTAAGCTTACACTGCA4220.49072620501191927No Hit
CATAGAACCAACCTCTCTATCTCCGTAGATAGCGAGAAGAGTGGAGGCTC3870.4500261643118786No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTATAGACTCTGTTTACT3810.44304901447758593No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTAAGAAGTGTATTAAT3410.39653468224896793No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGCATTCTCTCAGGGCTG3290.38258038258038257No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA3290.38258038258038257No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGATGTGCAATATGGGCTGGG3200.37211465782894354No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGAGAAGTGTATTAATTA3150.3663003663003663No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTACGGCAACATATCAGAAGCAT3110.3616489330775045No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTCTGTTTACTCGGAGAT2920.339554625268911No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTGTTTACTCGGAGATTT2740.3186231757660329No Hit
CATAGAGGCACGATCTTGTTTCACTGTGCTGAGGGTCACTGACAGGTCTT2720.31629745915460206No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTCTGTTTACTCGGAGATT2710.31513460084888656No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGAACCCAGGGCAGAGAGTGTGT2660.30932030932030935No Hit
CATAGAGGCACAGGGATAATGAGGGAGATCTATGAGAGGAGGAGCTGACT2510.2918774347345776No Hit
CATAGACACAGGCCAATCTCAGCAGGGCAGAGAGTGTGTTGTATTCTATG2510.2918774347345776No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGTCACTGACAGGTCTTAAAGC2470.2872260015117158No Hit
CATAGATACCTGTCCTCTGCCTCTAGCCAAATTCCTTACCGATCTATGTG2390.2779231350659922No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTATGTAGGAATCTTTGGGAGGCT2390.2779231350659922No Hit
CATAGAAGCCTTTTGAGATCTGAGCATTCTCTCAGGGCTGTTCTCTATGT2340.27210884353741494No Hit
CATAGAGTGCTCTCTTTCCCCACCCCAGGTAGCAAAACAGAGTCTATGTG2210.25699168556311414No Hit
CATAGAGTGATCCTCCTTTCTCAGCTTACACTGCACATGGGGTCTATGTG2200.2558288272573987No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATCTGTTTACTCGGAGATTTG2090.24303738589452878No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGCTCTGTTTACTCGGAG1990.23140880283737428No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTATCCCCAGGTAGCAAA1840.21396592825164257No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTATCCCCCAGGTAGCAA1760.20466306180591895No Hit
CATAGAGGCACGATCTTGTTTCACTGTGGCACGATCTTGTTTCACTGAGC1720.20001162858305715No Hit
CATAGATGGGATTATAGGTGTGAGCCATCGCGCCTGGCCAAAAATTTCCA1690.19652305366591077No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATGCATT1630.18954590383161812No Hit
CATAGAGGCACGATCTTGTTTCACTGTGCTGAGGGTCACTTCTATGTGTA1520.17675446246874818No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAGTACCAAAACTTATCTGGGCA1510.17559160416303274No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTAGAACCATGTCGTCA1420.16512587941159368No Hit
CATAGATGGGATTATAGGTGTGAGCCACTGTGTCTAGCATGCTAACTACT1370.15931158788301644No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTGCATTCTCTCAGGGCTGTT1250.14535728821443106No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTTGAGACAGAAGCAGCATCAATGG1240.14419442990871562No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATGTCCA1100.12791441362869935No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACTTATCTGGGCACGGTGGTCTAT1100.12791441362869935No Hit
CATAGACCATCCCTTCTACAAGAGGCAGGTGGGTAGAGAGTTCTGTAGAT1080.12558869701726844No Hit
CATAGACCACACACACAACTGAGAGTGGTGGTGGTGGTGGTCACTGACAG1040.12093726379440665No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTACTTTTCTAAT1040.12093726379440665No Hit
CATAGAGGAGAATGATATTGTTGCAGATTTCTATGTGTAGAACCATGTCG980.11396011396011395No Hit
CATAGAGCAGCATTTCTCTCCAAGGAATCTTTGGGAGGCTATTAGTCTAT980.11396011396011395No Hit
CATAGAGCCCCCAGAGAAGAATGACCCATAGAGCCCCCAGAGGAGAATGA960.11163439734868305No Hit
CATAGAGCAGCATTTCTCTCCAAGGACTTGGTCTCATAGAGCAGCATTCT960.11163439734868305No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTCATCAGTGTCAGGGCAGAG950.11047153904296761No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTGAAGCAGAGGT940.10930868073725218No Hit
CATAGACACACTGACAATTTGCACCTGGCCAAAAATTTCCATCTATGTGT930.10814582243153673No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTAGCTTACACTG920.10698296412582128No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTAGCATTCTCTCAGGGCTGT910.10582010582010583No Hit
CATAGATACCTGTCCTCTGCCTCGAGCCAAATTCCTTACCGATCTATGTG900.10465724751439037No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACGGCAACATATCAGAAGCATCTA900.10465724751439037No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCCATTCTC900.10465724751439037No Hit
CATAGAGGTGAGCGGCTGTCTCCATCCAGTCCATCCAGTCCAGCTCCTTC890.10349438920867493No Hit
CATAGATGGGATTATAGGTGTGAGCCATTGCGCCTGGCCAAAAATTTCCA890.10349438920867493No Hit
CATAGACACACTGACAATTTGCACCTGCCTCTAGCCAAATTCCTTACCGA880.10233153090295947No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGCAGGGCAGAGAG860.10000581429152858No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)