FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807687

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807687
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences61026
Sequences flagged as poor quality0
Sequence length150
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA1612026.414970668239768No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCA51548.445580572215121No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGAATTACAGGTGCCCGCCAC24393.9966571625208926No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGAAAG16932.774227378494412No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTTGTATATCT8731.4305378035591387No Hit
CATAGAGGTGAGCGGCTGTCTCCATTCAACTTTCCTTGGCTCTATGTGTA8571.40431947038967No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA7571.2404548880804902No Hit
CATAGATTGCATAGCCATGTGTAGCCCCTAAGCCCAGGTCTATGTGTAGA6461.0585652017173008No Hit
CATAGATTGCATAGCCATGTATAGCCCCTAAGCCCAGGTCTATGTGTAGA6281.0290695769016485No Hit
CATAGATTGCATAGCCATGTGTAGCCCCTAAAGCCCTTGTGAAGTTCTAT6141.0061285353783633No Hit
CATAGAGGTGAGCGGCTGTCTCCAGATGATATGAACCCAAAGGTCTATGT5970.9782715563858027No Hit
CATAGAATCCTTTCCCCATTGCTTGCTCATTATTATTGGATGGGATCTAT5130.8406253072460919No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGGTCAGGAGATTGAGACCATCCTG4390.719365516337299No Hit
CATAGACCTCCTGTTTGACCATTTTGAACATAGCCTTTGGGGTTTCTATG4150.6800380165830957No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTGTCAAATTTGTTAAAAGAGG4000.6554583292367188No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGTGCCTGCTAT3580.5866352046668634No Hit
CATAGACTGTCATTGCTTGCCCATTGCTTGCTCATTATTATTGGATGGGA3180.5210893717431915No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACCTCTACT3140.5145347884508242No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACTGCAGGCGCATGCTTG3020.4948710385737227No Hit
CATAGATTGCATAGCCATGTGTAGCCATGCTGAAGTCCCATGATCTATGT2740.44898895552715234No Hit
CATAGACTGTCATTGCTTGCCCATTGCTTGTTTTTCTCAGGTTTGTCAAA2360.3867204142496641No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTGTCAGGTTTGTCAAAGATCA2360.3867204142496641No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGCCTGCCAC2340.38344312260348046No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGTGCACACCAC2290.3752498934880215No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACCTGCCAC2260.3703339560187461No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGCCCACCAC2020.331006456264543No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA1990.32609051879526757No Hit
CATAGAATAGCCAGCAGAAGGAAGCAGGAATTAGACTCTTGACATCTATG1820.29823353980270706No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCAACATGGTG1800.29495624815652344No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACGACAGCCCGGCTACTG1780.29167895651033987No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGCACCCGCCAC1720.28184708157178906No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTGTCAAGAAGTCAAATTGTCC1700.2785697899256055No Hit
CATAGACATGCTAACATTTCTGGGGATACTGGGGACTGTGACTCTGTTTT1690.2769311441025137No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGTGGGGACTACAAATGTGCACCAC1370.22449447776357617No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACATGCCAC1370.22449447776357617No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCGCCTGCCAC1340.2195785402943008No Hit
CATAGAGGTGAGCGGCTGTCTCCATCACTTATACGCCTCCCTGTCTATGT1310.21466260282502542No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACCCACCAC1300.21302395700193358No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTAATACAAAAAATTAG1280.20974666535574998No Hit
CATAGAATCCTTTCCCCATTGCTTGTTCATTATTATTGGATGGGATCTAT1270.2081080195326582No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTAGTGAAATTCCTGAGGTCAGG1190.19499885294792385No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCATGTGCCAC1160.19008291547864845No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGTGGTTTCTCTCTATCTGATTTCT1160.19008291547864845No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGTTGGGATTACAGGTGCCTGCCAC1150.18844426965555666No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCATGCACCAC1140.18680562383246485No Hit
CATAGACCATCCAGAGGTAATTCTGCTCATTATTATTGGATGGGATCTAT1130.18516697800937304No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA1070.17533510307082226No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTATAGGTGTGTGCCAC1060.17369645724773047No Hit
CATAGACCAGACTTTTGAAAGAAGCACACAAAAAGGGCATCTATGTGTAG1040.17041916560154688No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACCCGCCAC1040.17041916560154688No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGCCCACCAT990.1622259364860879No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA980.1605872906629961No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCGTGCACCAC970.1589486448399043No Hit
CATAGAGGTGAGCGGCTGTCTCCACATCCAGCTGCTTTTTGTATTTTTAA930.1523940615475371No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACACACCAC920.15075541572444534No Hit
CATAGAGGTGAGCGGCTGTCTCCACTAAAAATACAAAAATTAGCCAGGCA920.15075541572444534No Hit
CATAGAAAGGCCTTCCTGTATCAGTCAGTGTTGTTGTCTGTGACAGCTTG920.15075541572444534No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGTGCCTGCCAC910.14911676990135353No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGCACACCAT900.14747812407826172No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGTGACTTCAGGCGCCCGCCAC900.14747812407826172No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG880.14420083243207812No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGAGATTATAGGTACTAATTTT870.14256218660898634No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGAATTACAGGTGCCTCACAC860.14092354078589453No Hit
CATAGAAGTTCTGATCCACATTCACGTATAGCCCCTAAGCCCAGGTCTAT850.13928489496280275No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACGGGTGTGTGCCAC850.13928489496280275No Hit
CATAGAGGTGAGCGGCTGTCTCCAGCAGGACTTTTTCTCCCCTCTACTGA810.13273031167043556No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGCACACACCAC760.12453708255497657No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGAGTTATAGGTGCCCACCAC740.12125979090879296No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA730.11962114508570118No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCGGGGACTACAGCTGTGCACCAT730.11962114508570118No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGAGATTACAGGCATGTGCCAC730.11962114508570118No Hit
CATAGACTGTCATTGCTTGCCCATTGCTCATTATTATTGGATGGGATCTA690.11306656179333398No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGTGCATGCCGC690.11306656179333398No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGCATGCCAC690.11306656179333398No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGCCTACAGGCATGTGCCAC680.1114279159702422No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTGTCAGGTTTGTCAAAGATGA680.1114279159702422No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGCGATTACAGGCGCCTGCCAC670.1097892701471504No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGAATTACAGGCACCTGCCAC670.1097892701471504No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA660.1081506243240586No Hit
CATAGACTGCCTCAGCCTCCTGAGTATCTGAGATTATAGGCGCCCACCAC660.1081506243240586No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTTGGCTCACAGGTGAGCGCCAC660.1081506243240586No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGTACCACAGGCATGTGCCAC660.1081506243240586No Hit
CATAGAGTTCAAATGGCCAATCAGGTGCTCATTATTATTGGATGGGATCT650.10651197850096679No Hit
CATAGAAAGGCCTTCCTGTATCAGTCAGTGTTGTCTGTGACAGCTTGTAT640.10487333267787499No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCTTGCGCCAC630.10323468685478321No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA620.10159604103169141No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGACGTGCACCAC620.10159604103169141No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA620.10159604103169141No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)