FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807691

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807691
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13454
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA658148.9148208711164No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGT4012.980526237550171No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGTGTAGAACCATG2962.200089192805114No Hit
CATAGAAAGGGACAAGGGCTCACTCTAGCCTGGGAGACATCTATGTGTAG2862.1257618552103463No Hit
CATAGAGGCGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA1741.293295674148952No Hit
CATAGAGCCATCATCATTTCTCACCCAGGGTAATTCTGGCCTTGTTCTAT1130.8398989148208712No Hit
CATAGATCTCAAACAGCCTCTCCCAGGGTAATTCTGGCCTTGTTCTATGT1090.8101679797829642No Hit
CATAGAACAATCAGGCACCCACCATGCTGAAGTCCCATGATCTATGTGTA1080.8027352460234874No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAATTCTCTATGTG950.7061097071502899No Hit
CATAGATCTCAAACAGCCTCTCCCAGGAAAGTTGGAACCTATCAGTGTCT940.6986769733908131No Hit
CATAGAAAGGGACAAGGGCTCACTCTGCTGCTCACTCTTTGGGTTCTATG830.616916902036569No Hit
CATAGAGCCATCATCATTTCTCACCCAGGAAAGTTGGAACCTATCAGTGT820.6094841682770923No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTACCAAAAGCACAAG800.5946187007581388No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTTACGGTAGCAGAAGCTTTGAGA790.5871859669986621No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTCAGTGCCATACCAAGAATA780.5797532332391854No Hit
CATAGAACCAACCCTGATTCTGCTGCTCACTCTTTGGGTTCTATGTGTAG600.44596402556860415No Hit
CATAGAGATCTTCTCGGCTTAGCGGCCATTGTCGCCTTCTCTTCTCTATG590.43853129180912737No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA510.37906942173331354No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA510.37906942173331354No Hit
CATAGAGCCATCATCATTTCTCACCCAGAAGCTTTGAGATTTGTGTCTGT500.37163668797383675No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG500.37163668797383675No Hit
CATAGATGTTGTTGTTCTGTTGCCCAATATGAACAGAAAGAAGCTCTATG490.36420395421436No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTACTATGGCTTAATG440.32704028541697633No Hit
CATAGAGGGCTATCCTTGCTCAGATCACTCATAGAGGCAAGGGTACTATT420.31217481789802287No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAAATTCTCTTGACA400.2973093503790694No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTGGTCTCATAGAGGTTTCCT390.2898766166195927No Hit
CATAGATGTTGTTGTTCTGTTGCCCAGGAAAGTTGGAACCTATCAGTGTC380.28244388286011596No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA370.27501114910063923No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGGGCCTTCAGGTCA370.27501114910063923No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTCAGGAAAGTTGGAA370.27501114910063923No Hit
CATAGATGAAAGAGCATTGGTTGTAACACCGAAAAACACCCTCTATGTGT360.26757841534116245No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTGCCATACCAAGAATAAGAA340.252712947822209No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTTACGGTAGCAGAGGCAAGG340.252712947822209No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTGTGTGGCCAACAGGAAGGTCTA330.24528021406273226No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA330.24528021406273226No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA330.24528021406273226No Hit
CATAGAGCAGCGTGTGTCCGTTAAAATACGGTAGCAGAAGCTTTGAGATT320.2378474803032555No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA300.22298201278430207No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA300.22298201278430207No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGTATGCAGTCTGT300.22298201278430207No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGCCCGCGCAGAGCCTTCAGGTCA260.19325107774639513No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGATCA260.19325107774639513No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGTGTAGAACTGCT250.18581834398691838No Hit
CATAGATAGCAGCAATCTCAGGCCTCATGGTGGGAGTATACTGATAGCTC250.18581834398691838No Hit
CATAGATGTTGTTGTTCTGTTCCCCAATATGAACAGAAAGAAGCTCTATG240.17838561022744165No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTGAGGTTTCCTGGGC240.17838561022744165No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTGCTGCTCACTCTTTG230.17095287646796492No Hit
CATAGATGTTGTTGTTCTGTTGCCCATGTCGTCAGTGTCAGGAAAGTTGG230.17095287646796492No Hit
CGTAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA220.16352014270848816No Hit
CATAGATGGTAAGATGACATAGTGAAGAGTCAGTGTAGAGGCAAGGGTAC220.16352014270848816No Hit
CATAGAGATCTTCTCGGCTTAGCGGCTGAAGACTGACGCTGCCTGATCAC210.15608740894901144No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTACACTGAAACATTTTCTGG210.15608740894901144No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTTAGGTCA210.15608740894901144No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAGGGTAATTCTGGCCTTGT190.14122194143005798No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGCGCCTTCAGGTCA190.14122194143005798No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTGTGCCATACCAAGA180.13378920767058122No Hit
CATAGAAAGGGACAAGGGCTCACTCTCTGCTGCTCACTCTTTGGGTTCTA180.13378920767058122No Hit
CATAGAGGTGAGCGGCTGTCCCCACAAGTCCGCGCAGAGCCTTCAGGTCA180.13378920767058122No Hit
AATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA180.13378920767058122No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA170.1263564739111045No Hit
CATAGACTCACTCTGTCACCCAAGCTACACTGAAACATTTTCTGGTCAGC170.1263564739111045No Hit
CATAGACTCACTCTGTCACCCAAGCTGCTGCTCACTCTTTGGGTTCTATG170.1263564739111045No Hit
GATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA170.1263564739111045No Hit
TATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA160.11892374015162775No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCACAGAGCCTTCAGGTCA160.11892374015162775No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAAGTCA160.11892374015162775No Hit
CATAGATCTCAAACAGCCTCTCCCAGAAGCTTTGAGATTTGTGTCTGTTC160.11892374015162775No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCTGCGCAGAGCCTTCAGGTCA150.11149100639215104No Hit
CATAGAGGTGAGCGGCTGCCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA150.11149100639215104No Hit
CATAGGGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA150.11149100639215104No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAAATTCTCTTGAC140.10405827263267431No Hit
CATAGATCTAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGT140.10405827263267431No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCACGCAGAGCCTTCAGGTCA140.10405827263267431No Hit
CATAGACAAGCCTGCCAAGACCTCTCTACGGAGGCTGAAACTCTAAGGGT140.10405827263267431No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGCTGCTGCTCACT140.10405827263267431No Hit
CATAGAGATCTTCTCGGCTTAGCGGCTGTCTCCACAAGTCCGCGCAGAGC140.10405827263267431No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)