FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807692

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807692
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences241614
Sequences flagged as poor quality0
Sequence length150
%GC35

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCTTGGGTGCGAACATCAAGGAAGTTTCTGTGAGATCTATGAGA2608110.794490385490906No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGTAATAACCAGGCCCCTCTATGAG139125.7579444899716075No Hit
CATAGACGGATTATTCTCTCCATGGTCTACCAGTTATTAGTTGAATGAGC121145.013782313938762No Hit
CATAGAGAAGACTCCCTCAACCCACCCACAGCCAGGAAAGAATCTATGAG118754.914864204888789No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGTTCTGGGCCCCAGTGTGAA87163.6074068555630054No Hit
CATAGAAATGATGCTGAAGGGCCTGCCCTCTCTGCTGTTCCTTCTATGAG85473.5374605776155357No Hit
CATAGATCATGGGACTTCAGCATGGCTCAGGTATGTCTTTATTAGCTCTA78503.2489839164949053No Hit
CATAGACTCATTGCACTTTCCACAACTGTGTGCTTGAACCAGATTCTATG71232.948090756330345No Hit
CATAGATCACGTAGAAACTGGAGAGGCTAATCTGAAATCTTCGTGTTCTA70802.9302937743673794No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTCTTCCTTTTCTGCCTTCATCTA64892.685688743201967No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAAGGAAGTTTCTGTGAGATC57962.3988676152871937No Hit
CATAGACTCATTGCACTTTCCACAACTGTCCCAACTGTCTCTGAAAAATT56842.35251268552319No Hit
CATAGACTCATTGCACTTTCCACAACTGTCATTGTCGCTGTCCCATCTAT45471.8819273717582592No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGAAGTGATGGGCTAGATCTATGA38011.573170428865877No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTTATTTTAAAGGACTGGAAGC37371.5466818975721606No Hit
CATAGAAATGATGCTGAAGGGCCTGTTTCCCCACTCAAATACCATCTATG35381.464319120580761No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAAAGAAATCTACAAAGGATTCTGG26671.103826765005339No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAGGAACCATGGGAGGTCTAT26211.0847881331379805No Hit
CATAGACCAGCAGACACTCCCATCATTTATTTTAAAGGACTGGAAGCCTC25491.0549885354325494No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAGAAGTAGGAAGTATTACCCCT21060.871638232883856No Hit
CATAGAAGGACAAAGACATTTAGGACCCACGCTGTCCTTCTCTGAATCTA20100.8319054359432815No Hit
CATAGACCTCCGACAGTTTTTATGCACCTTCATTGTTGCTCTATGAGACC19050.788447689289528No Hit
CATAGAGAAGACTCCCTCAACCCACGCTGTCCTTCTCTGAATCTATGAGA18030.7462315925401674No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTGCCTCTAAGTAAACTGAAT17960.7433344094299171No Hit
CATAGAGTCCAACTATTCCAGCACCACGCTGTCCTTCTCTGAATCTATGA15210.6295165015272294No Hit
CATAGATGTGTAGCCTGGGTCTGACATGCCAGGAATCAATGTTCTATGAG13800.5711589560207604No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACCTGACGCTATACCACACTAC12730.5268734427640783No Hit
CATAGACCCAAGACCCCAGCCTTTACACACTGACGCTATACCACACTACA12260.5074209275952553No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGCCCCAGTGTGAATACTTCT12230.5061792776908624No Hit
CATAGACGTGACTAAAAGCATGTTGGTGGAAGGGTAAGAGAGGGTCTATG11760.4867267625220393No Hit
CATAGAAAAAACAGTTGGCCAGGCATCTATGAGAGATCCCACCATTTGCC11360.4701714304634665No Hit
CATAGAGCTGTACTGCATCTTTTCTCAAACTGCTGGGGTTGCTCTATGAG11010.4556855149122153No Hit
CATAGATGGCCAAGATACGAGCACATACACTGACGCTATACCACACTACA10270.4250581506038557No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCTGTTTCCCCACTCAAATACCATC9860.4080889352438186No Hit
CATAGACCAGCAGACACTCCCATCATCAAGGAAGTTTCTGTGAGATCTAT9450.3911197198837816No Hit
CATAGATCAAGGAAAACACCAGCCCACGCTGTCCTTCTCTGAATCTATGA8860.3667006050973867No Hit
CATAGACCGCTTCCCAATTTTTGTAACAAATGAGAAACCTGGATGCTTCT8740.36173400547981494No Hit
CATAGACCAGCAGACACTCCCATCATACACTGGCTCAGGTATGTCTTTAT8420.3484897398329567No Hit
CATAGACCTCCGACAGTTTTTATGCACTGTCCCAACTGTCTCTGAAAAAT8100.3352454741860985No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGACGCTATACCACACTACA8090.33483159088463416No Hit
CATAGATTGTGTGTCTCTTCTATATTAACAGTCACACTGCCCTCTCTGCT7670.31744849222313276No Hit
CATAGACCAGCAGACACTCCCATCATTCAGACCAAGGGGTAAGGCGTACT7350.30420422657627455No Hit
CATAGACGGATTATTCTCTCCATGGTCTATCAAGGGGTAAGGCGTACTGG7290.30172092676748863No Hit
CATAGATGTTTTATCAAAGGCATGCTCATACACTGACGATCATTGTTCAC7110.2942710273411309No Hit
CATAGAGCTTGGGCGCGAACATCAAGGAAGTTTCTGTGAGATCTATGAGA7070.2926154941352736No Hit
CATAGATGGCCAAGATACGAGCACATTGCTTCTTGTGGTAACTGGTCTAT7000.2897183110250234No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGGGGTAAGGCGTACTGGTCTATGA6940.28723501121623746No Hit
CATAGAAATGATGCTGAAGGGCCTGCACTGACGACATGGTTCTACACATA6880.28475171140745154No Hit
CATAGAAATGATGCTGAAGTGATGGGCTAGATCTATGAGACCAAGTCTCT6490.2686102626503431No Hit
CATAGACCGCTTCCCAATTTTTGTAACAACACTGACGCTATACCACACTA6460.26736861274595014No Hit
CATAGAGAAGACTCCCTCAACCCACCACACTGACGCTATACCACACTACA5810.2404661981507694No Hit
CATAGACGGATTATTCTCTCCATGGTCTATGAGGCTAATCTGAAATCTTC5800.24005231484930512No Hit
CATAGACATTTAATCCTCACAATGACCCATTGCTTCTTGTGGTAACTGGT5430.22473863269512526No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGCTGAAGTGATGGGCTAGATCTA5230.21646096666583892No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGACATGGCTCAGGT4930.2040444676219093No Hit
CATAGAGTCCAACTATTCCAGCACCATGCTGGTGCATTACAGAGAGGAGA4830.19990563460726612No Hit
CATAGATCAAGGAAAACACCAGCCCACCCACAGCCAGGAAAGAATCTATG4690.19411126838676568No Hit
CATAGAGATCCCACCATTTGCCATCTATGAGACCAAGTCTCTGCTACCGT4520.18707525226187224No Hit
CATAGAGTGCCTGTTTCCTCATTCGTGTCTGTTTCCCCACTCAAATACCA4520.18707525226187224No Hit
CATAGACCAACATTTCTTCTCCCAGGGTTACACATAGACCAACATTTCTT4350.1800392361369788No Hit
CATAGAAAATTTGTGATGGTAAATCATGGGACATGCCAGGAATCAATGTT4290.1775559363281929No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGACATGCCAGGAATCAATGT4240.17548651982087132No Hit
CATAGACTCATTGCACTTTCCACAACTGTACACTGGCTCAGGTATGTCTT4200.17383098661501403No Hit
CATAGACCGCTTCCCAATTTTTGTAACACCCACAGCCAGGAAAGAATCTA4190.1734171033135497No Hit
CATAGAGCTGTACTGCATCTTTTCTCAGACTGCTGGGGTTGCTCTATGAG4120.17051992020329948No Hit
CATAGACGTGACTAAAAGCATGTTGGTGCATTACAGAGAGGAGATCTATG4090.16927827029890652No Hit
CATAGAGCTTTTTTTCCAGCCTCCAAGTAATAACCAGGCCCCTCTATGAG4020.1663810871886563No Hit
CATAGAGTCCAACTATTCCAGCACCACACTGACGACATGGTTCTACACAT3990.16513943728426334No Hit
CATAGACCTCCGACAGTTTTTGTGCACCTTCATTGTTGCTCTATGAGACC3870.16017283766669152No Hit
CATAGAGTGCCTGTTTCCTCATTCGTACGGTGGAAGGGTAAGAGAGGGTC3840.15893118776229856No Hit
CATAGAAATGATGCTGAAGGGCCTGCACATAGAAATGATGCTGAAGTGAT3670.15189517163740512No Hit
CATAGATGTGTAGCCTGGGTCTGACACACTGACGACATGGTTCTACACAT3630.15023963843154783No Hit
CATAGACCCAGATGCTGTCCCACTAATGCTGTCCCACGCTGTCCTTCTCT3620.14982575513008353No Hit
CATAGACCAGCAGACACTCCCATCATCTACGGTCTACCAGTTATTAGTTG3550.14692857201983328No Hit
CATAGACCCAAGACCCCAGCCTTTACACTGACGACATGGTTCTACACATA3490.1444452722110474No Hit
CATAGAAATGATGCTGAAGGGCCTGCGATGCTGAAGTGATGGGCTAGATC3360.13906478929201121No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC3340.13823702268908258No Hit
CATAGACGGATTACTCTCTCCATGGTCTACCAGTTATTAGTTGAATGAGC3290.136167606181761No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAGGAGCTGAGTCATGGGGTCTATG3280.13575372288029666No Hit
CATAGAAATGATGCTGAAGGGCCTGCGAAATGATGCTGAAGTGATGGGCT3270.13533983957883236No Hit
CATAGAGAAGACTTCCTCAACCCACCCACAGCCAGGAAAGAATCTATGAG3220.13327042307151074No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTTTTTGTGCACCTTCATTGTT3180.13161488986565348No Hit
CATAGACCTCCGACAGTTTTTATGCACTGTCATTGTCGCTGTCCCATCTA3160.13078712326272485No Hit
CATAGACGTGACTAAAAGCATGTTGGTGACTTGGTCTACCAGTTATTAGT3150.13037323996126055No Hit
CATAGAAATGATGCTGAAGGGCCTGCAGTCTTTGGAGGAATCTATGAGAC3110.12871770675540326No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAACACTGACGACATGGCTCAGGTA3030.12540664034368867No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAACACTGTCATTGTCGCTGTCCCA3020.12499275704222437No Hit
CATAGAAATGATGCTGAAGGGCCTGCTACCGTAGTCCCAACTGTCTCTGA2870.1187845075202596No Hit
CATAGACTCATTGCACTTTCCACAACTGCCCTCTCTGCTGTTCCTTCTAT2810.11630120771147366No Hit
CATAGAAATGATGCTGAAGGGCCTGGATGCTGAAGTGATGGGCTAGATCT2790.11547344110854503No Hit
CATAGAAATGATGCTGAAGGGTCTGTTTCCCCACTCAAATACCATCTATG2750.11381790790268775No Hit
CATAGATGTGTAGCCTGGGTCTGTCATTGTCGCTGTCCCATCTATGAGAC2750.11381790790268775No Hit
CATAGAAAAAACAGTTGGCCAGGCATACACTGACGATCATTGTTCACTGC2720.1125762579982948No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTACGTAGCAGCATAATTTCCC2670.1105068414909732No Hit
CATAGACACAACAGAGAGAACGGGCTACGGTAGCAGCATAATTTCCCATG2610.1080235416821873No Hit
CATAGATCACGTAGAAACTGGAGAGGTGGAAGGGTAAGAGAGGGTCTATG2550.10554024187340139No Hit
CATAGATGTGTAGCCTGGGTCTGACAGTTTTTGTGCACCTTCATTGTTGC2450.10140140885875819No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)