FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807693

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807693
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences241614
Sequences flagged as poor quality0
Sequence length150
%GC33

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCTCACAGAAACTTCCTTGATGTTCGCACCCAAGCTCTATGTGT2676111.075931030486643No Hit
CATAGAGGGGCCTGGTTATTACTTGGAGGCTGGAGAAAAAGCTCTATGTG141345.849826582896686No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCATGGAGAGAATAATCCG125125.17850786792156No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGTTGAGGGAGTCTTCTCTATGTG119144.931005653645898No Hit
CATAGAAGGAACAGCAGAGAGGGCAGGCCCTTCAGCATCATTTCTATGTG88063.6446563526947946No Hit
CATAGAAGTATTCACACTGGGGCCCAGAACCCATTGTAGATTTCTTTCAC86433.5771933745561104No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGCTGAAGTCCCATGATCTA78853.263469832046156No Hit
CATAGAATCTGGTTCAAGCACACAGTTGTGGAAAGTGCAATGAGTCTATG73163.0279702335129586No Hit
CATAGAACACGAAGATTTCAGATTAGCCTCTCCAGTTTCTACGTGATCTA70822.9311215409703077No Hit
CATAGATGAAGGCAGAAAAGGAAGAACAACAACAAAACTCGTGACTTCTA65752.721282707127898No Hit
CATAGATCTCACAGAAACTTCCTTGATGAGCATGCCTTTGATAAAACATC59632.4679861266317347No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTTGTGGAAAGTGCAATGAG57272.3703096674861555No Hit
CATAGATGGGACAGCGACAATGACAGTTGTGGAAAGTGCAATGAGTCTAT46421.9212462853973693No Hit
CATAGATCTAGCCCATCACTTCAGCAGGCCCTTCAGCATCATTTCTATGT39591.6385639904972393No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGAGCATGCCTTTGATAAAAC38781.6050394430786294No Hit
CATAGATGGTATTTGAGTGGGGAAACAGGCCCTTCAGCATCATTTCTATG36281.5015686177125498No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAACCATGT28921.1969505078348108No Hit
CATAGATGGCCCAGAATCCTTTGTAGATTTCTTTCACTCTCCCACCATTC27451.136109662519556No Hit
CATAGACCTCCCATGGTTCCTGATGAGCATGCCTTTGATAAAACATCTAT26781.1083794813214465No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGATGGGAGTGTCTGCTGGTC25311.0475386360061918No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCATTAGGAAGTCTTCTCAGCTT21070.8720521161853204No Hit
CATAGATTCAGAGAAGGACAGCGTGGGTCCTAAATGTCTTTGTCCTTCTA20170.8348026190535316No Hit
CATAGAGCAACAATGAAGGTGCATAAAAACTGTCGGAGGTCTATGTGTAG19890.8232138866125307No Hit
CATAGATTCAGAGAAGGACAGCGTGGGTTGAGGGAGTCTTCTCTATGTGT18280.7565786750767753No Hit
CATAGATTCAGTTTACTTAGAGGCAGACAGTTGTGGAAAGTGCAATGAGT18200.7532676086650608No Hit
CATAGATTCAGAGAAGGACAGCGTGGTGCTGGAATAGTTGGACTCTATGT15520.6423468838726233No Hit
CATAGATGGCAAATGGTGGGATCTCTATGTGTAGAACCATGTCGTCAGTG14490.5997169038217984No Hit
CATAGAACATTGATTCCTGGCATGTCAGACCCAGGCTACACATCTATGTG14000.5794366220500468No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGGTACCCTGGGAGAAGAAATG12740.5272873260655425No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTGTAAAGGCTGGGGTCTT12430.5144569437201487No Hit
CATAGAAGTATTCACACTGGGGCCCATTGTAGATTTCTTTCACCTCCTCT12210.5053515110879336No Hit
CATAGACCCTCTCTTACCCTTCCACCAACATGCTTTTAGTCACGTCTATG11600.48010462969861023No Hit
CATAGATGGCAAATGGTGGGATCTCTCATAGATGCCTGGCCAACTGTTTT11390.47141308036785945No Hit
CATAGAGCAACCCCAGCAGTTTGAGAAAAGATGCAGTACAGCTCTATGTG11160.4618937644341801No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTATGTGCTCGTATCTTGG10110.4184360177804266No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACGAATGAGGAAACAGGCACTC10110.4184360177804266No Hit
CATAGATCTCACAGAAACTTCCTTGATGATGGGAGTGTCTGCTGGTCTAT9360.3873947701706027No Hit
CATAGAAGCATCCAGGTTTCTCATTTGTTACAAAAATTGGGAAGCGGTCT8970.37125332141349426No Hit
CATAGATTCAGAGAAGGACAGCGTGGGCTGGTGTTTTCCTTGATCTATGT8890.3679422550017797No Hit
CATAGAGCTAATAAAGACATACCTGAGCCAGTGTATGATGGGAGTGTCTG8440.3493175064358854No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTGCATAAAAACTGTCGGAG8350.34559255672270645No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTAGCCCGTTCTCTCTGTT8070.3340038242817055No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTGTGACTGTTAATATAGAAGAGAC7730.3199317920319187No Hit
CATAGACCAGTACGCCTTACCCCTTGATAGACCATGGAGAGAATAATCCG7560.3128957759070253No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTATGAGCATGCCTTTGA7390.3058597597821318No Hit
CATAGACCAGTACGCCTTACCCCTTGGTCTGAATGATGGGAGTGTCTGCT7200.29799597705430975No Hit
CATAGACCAGTACGCCTTACCCCTTGGAGGCTGGAGAAAAAGCTCTATGT7080.2930293774367379No Hit
CATAGACCAGTTACCACAAGAAGCAATGTGCTCGTATCTTGGCCATCTAT6980.2888905444220948No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTTGTTACAAAAATTGGGA6540.2706796791576647No Hit
CATAGAACACGAAGATTTCAGATTAGCCTCATAGACCATGGAGAGAATAA5990.24791609757712718No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTGGTGGGTTGAGGGAGTC5830.24129396475369805No Hit
CATAGACCAGTTACCACAAGAAGCAATGGGTCATTGTGAGGATTAAATGT5590.2313607655185544No Hit
CATAGAACAACTTGCTCTAATACTTGGGAGAAGAAATGTTGGTCTATGTG5580.23094688221709006No Hit
CATAGATCTAGCCCATCACTTCAGCAGCAGGCCCTTCAGCATCATTTCTA5500.2276358158053755No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGTCGTCAGTGTACCCTGGG4980.20611388412923093No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACGAATGAGGAAACAGGCAC4840.20031951790873045No Hit
CATAGATCTCCTCTCTGTAATGCACCAGCATGGTGCTGGAATAGTTGGAC4780.19783621809994456No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGCTGGTGTTTTCCTTGATCTATG4580.18955855207065817No Hit
CATAGAGCTAATAAAGACATACCTGAGCCAGTGTACAGTTGTGGAAAGTG4430.18335030254869336No Hit
CATAGAACATTGATTCCTGGCATGTCCCATGATTTACCATCACAAATTTT4410.18252253594576473No Hit
CATAGAACATTGATTCCTGGCATGTCCCATTGTAGATTTCTTTCACCTCC4200.17383098661501403No Hit
CATAGAGCAACCCCAGCAGTCTGAGAAAAGATGCAGTACAGCTCTATGTG4170.17258933671062107No Hit
CATAGAGCAACAATGAAGGTGCACAAAAACTGTCGGAGGTCTATGTGTAG4140.1713476868062281No Hit
CATAGATTCTTTCCTGGCTGTGGGTGTTACAAAAATTGGGAAGCGGTCTA4120.17051992020329948No Hit
CATAGATCTCCTCTCTGTAATGCACCAACATGCTTTTAGTCACGTCTATG4100.16969215360037082No Hit
CATAGACCCTCTCTTACCCTTCCACCGTACGAATGAGGAAACAGGCACTC3900.16141448757108445No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGCAGGCCCTTCA3820.1581034211593699No Hit
CATAGATTCAGAGAAGGACAGCGTGGGACAGCATTAGTGGGACAGCATCT3690.15272293824033376No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCGTAGATGATGGGAGTGT3530.14610080541690465No Hit
CATAGATCTAGCCCATCACTTCAGCATCGCAGGCCCTTCAGCATCATTTC3500.1448591555125117No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCGCAGGCCCTTCAGCATC3480.14403138890958306No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA3350.1386509059905469No Hit
CATAGACCCCATGACTCAGCTCCTCACTCTCCCACCATTCAGACTCTATG3340.13823702268908258No Hit
CATAGATGGGACAGCGACAATGACAGTGCATAAAAACTGTCGGAGGTCTA3300.13658148948322532No Hit
CATAGAGCAACAATGAAGGTGCACAAAAACTGTCATTGTGGGTTTTAACT3250.1345120729759037No Hit
CATAGATTCCTCCAAAGACTGCAGGCCCTTCAGCATCATTTCTATGTGTA3200.1324426564685821No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCAAGTCACCAACATGCTT3150.13037323996126055No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGTCGTCAGTGTTCACTCTC3120.12913159005686758No Hit
CATAGATGGGACAGCGACAATGACAGTGTTCACTCTCCCACCATTCAGAC3110.12871770675540326No Hit
CATAGATCTAGCCCATCACTTCAGCATCCAGGCCCTTCAGCATCATTTCT3000.12416499043929573No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACCCTTCAGCATCATTTCTATG2920.12085392402758119No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACTACGGTAGCAGGCCCTTCAGC2890.11961227412318823No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTTGTGGAAAGTGCAATGAGTCTAT2870.1187845075202596No Hit
CATAGATGGGACAGCGACAATGACAGACCCAGGCTACACATCTATGTGTA2720.1125762579982948No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTATGCCTGGCCAACTGT2670.1105068414909732No Hit
CATAGATGACATGGGAAATTATGCTGCTACGTAATGAGCATGCCTTTGAT2670.1105068414909732No Hit
CATAGATGACATGGGAAATTATGCTGCTACCGTAGCCCGTTCTCTCTGTT2620.10843742498365162No Hit
CATAGAGCAACAATGAAGGTGCACAAAAACTGTCAGACCCAGGCTACACA2590.10719577507925865No Hit
CATAGACCCTCTCTTACCCTTCCACCTCTCCAGTTTCTACGTGATCTATG2520.10429859196900843No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)