FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807701

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807701
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8433
Sequences flagged as poor quality0
Sequence length150
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA303736.013281157357994No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGCTGAAGTCCCATGATCTA3974.707695956361912No Hit
CATAGAGGGGCCTGGTTATTACTTGGAGGCTGGAGAAAAAGCTCTATGTG2913.450729277837069No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCATGGAGAGAATAATCCG2893.4270129254120714No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGTTGAGGGAGTCTTCTCTATGTG2182.585082414324677No Hit
CATAGAAGGAACAGCAGAGAGGGCAGGCCCTTCAGCATCATTTCTATGTG2002.371635242499704No Hit
CATAGATCTCACAGAAACTTCCTTGATGAGCATGCCTTTGATAAAACATC1812.1463298944622315No Hit
CATAGAATCTGGTTCAAGCACACAGTTGTGGAAAGTGCAATGAGTCTATG1651.9565990750622555No Hit
CATAGACCTCCCATGGTTCCTGATGAGCATGCCTTTGATAAAACATCTAT1291.529704731412309No Hit
CATAGATCTCACAGAAACTTCCTTGATGATGGGAGTGTCTGCTGGTCTAT1151.3636902644373294No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGATGGGAGTGTCTGCTGGTC941.1146685639748606No Hit
CATAGACCCTCTCTTACCCTTCCACCAACATGCTTTTAGTCACGTCTATG800.9486540969998813No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA760.9012213921498874No Hit
CATAGAACACGAAGATTTCAGATTAGCCTCTCCAGTTTCTACGTGATCTA730.8656468635123917No Hit
CATAGATGGGACAGCGACAATGACAGTTGTGGAAAGTGCAATGAGTCTAT720.8537886872998933No Hit
CATAGATTCAGAGAAGGACAGCGTGGGTTGAGGGAGTCTTCTCTATGTGT700.8300723348748963No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCATTAGGAAGTCTTCTCAGCTT610.7233487489624096No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAACCATGT570.6759160441124155No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGAGCATGCCTTTGATAAAAC530.6284833392624214No Hit
CATAGATCTAGCCCATCACTTCAGCAGGCCCTTCAGCATCATTTCTATGT490.5810506344124273No Hit
CATAGAAGTATTCACACTGGGGCCCATTGTAGATTTCTTTCACCTCCTCT420.4980434009249377No Hit
CATAGACCAGTACGCCTTACCCCTTGGAGGCTGGAGAAAAAGCTCTATGT410.4861852247124392No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTTGTGGAAAGTGCAATGAG400.4743270484999407No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTATGTGCTCGTATCTTGG390.46246887228744216No Hit
CATAGATGAAGGCAGAAAAGGAAGAACAACAACAAAACTCGTGACTTCTA360.42689434364994666No Hit
CATAGATTCAGTTTACTTAGAGGCAGACAGTTGTGGAAAGTGCAATGAGT340.4031779912249496No Hit
CATAGACCTCCCATGGTTCCTGATGATGGGAGTGTCTGCTGGTCTATGTG320.37946163879995254No Hit
CATAGATGGTATTTGAGTGGGGAAACAGGCCCTTCAGCATCATTTCTATG290.34388711016245704No Hit
CATAGATTCCTCCAAAGACTGCAGGGTCCTAAATGTCTTTGTCCTTCTAT290.34388711016245704No Hit
CATAGACCCTCTCTTACCCTTCCACCCTGGGAGAAGAAATGTTGGTCTAT290.34388711016245704No Hit
CATAGAGCAACCCCAGCAGTTTGAGAAAAGATGCAGTACAGCTCTATGTG290.34388711016245704No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTGTTGATGTTCGCACCC250.296454405312463No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGGGCCTTCAGGTCA240.2845962290999644No Hit
CATAGAACATTGATTCCTGGCATGTCAGACCCAGGCTACACATCTATGTG230.2727380528874659No Hit
CATAGAAGGAACAGCAGAGAGGGCAGACACTGTCATTGTGGGTTTTAACT190.22530534803747185No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTCTATGTGTAGAACCATG190.22530534803747185No Hit
CATAGACCTCCCATGGTTCCTGATGATGATGGGAGTGTCTGCTGGTCTAT180.21344717182497333No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACGAATGAGGAAACAGGCACTC180.21344717182497333No Hit
CATAGATGGCAAATGGTGGGATCTCTATGTGTAGAACCATGTCGTCAGTG180.21344717182497333No Hit
CATAGATGACATGGGAAATTATGCTGCTATGCCTGGGTCCTAAATGTCTT170.2015889956124748No Hit
CATAGAGGTGAGCGGCTGTCTCCAGGGTCCTAAATGTCTTTGTCCTTCTA170.2015889956124748No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG160.18973081939997627No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGCCCGCGCAGAGCCTTCAGGTCA150.17787264318747778No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA150.17787264318747778No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA140.16601446697497924No Hit
CATAGAAGCATCCAGGTTTCTCATTTGTACACTGTCATTGTGGGTTTTAA140.16601446697497924No Hit
CATAGATCTCCTCTCTGTAATGCACCAGTGTGGGCTGGTGTTTTCCTTGA140.16601446697497924No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA140.16601446697497924No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA140.16601446697497924No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA130.15415629076248075No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCTGCGCAGAGCCTTCAGGTCA130.15415629076248075No Hit
CATAGATGGCAAATGGTGGGATCTCTGAGCCCGTTCTCTCTGTTGTGTCT130.15415629076248075No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA120.1422981145499822No Hit
CATAGATGGCAAATGGTGGGATCTCTATGGGCTGGTGTTTTCCTTGATCT120.1422981145499822No Hit
CATAGAAGTCTCGCTCTGTCATGCAACAACAACAAAACTCGTGACTTCTA120.1422981145499822No Hit
CATAGATCTCACAGAAACTTCCTTGATGAAACATCATGTGCTCGTATCTT120.1422981145499822No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA110.1304399383374837No Hit
CATAGAGCAACAATGAAGGTGCATAAAAACTGTCGGAGGTCTATGTGTAG110.1304399383374837No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACCTTCCTTTCAATAGCCTTTTA100.11858176212498517No Hit
CATAGATCTAGCCCATCACTTCAGCACACTGACCAACATGCTTTTAGTCA100.11858176212498517No Hit
CATAGACCAGTACGCCTTACCCCTTGTTATAGAAAACAAGGAGAACATCT100.11858176212498517No Hit
CATAGATTCTTTCCTGGCTGTGGGTGCATAAAAACTGTCGGAGGTCTATG100.11858176212498517No Hit
CATAGATGGTATTTGAGTGGGGAAACAGATGGGTCATTGTGAGGATTAAA100.11858176212498517No Hit
CATAGAGCAACCCCAGCAGTCTGAGAAAAGATGCAGTACAGCTCTATGTG100.11858176212498517No Hit
CATAGATGGGACAGCGACAATGACAGTACACATAGATGCCTGGCCAACTG90.10672358591248667No Hit
CATAGATCTAGCCCATCACTTCAGCAGACCAACATGCTTTTAGTCACGTC90.10672358591248667No Hit
CATAGAGCAACCCCAGCAGTTTGAGAAAAGATGCCATGCTGAAGTCCCAT90.10672358591248667No Hit
CATAGATGCCACCACACCCAGTTAATTTTTGTATTTTCAGTAGAGATGGG90.10672358591248667No Hit
CATAGATTCAGAGAAGGACAGCGTGGGCTGGTGTTTTCCTTGATCTATGT90.10672358591248667No Hit
CATAGATGACATGGGAAATTATGCTGCTTACCGTAGCCCGTTCTCTCTGT90.10672358591248667No Hit
CATAGATCTAGCCCATCACTTCAGCACAGGCCCTTCAGCATCATTTCTAT90.10672358591248667No Hit
CATAGATGGCCCAGAATCCTTTGTAGAACCAGGTGGGTTGAGGGAGTCTT90.10672358591248667No Hit
CATAGATGAAGGCAGAAAAGGAAGAACATAGCCCGTTCTCTCTGTTGTGT90.10672358591248667No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTGTGGTGCTGGAATAGTTGGACTC90.10672358591248667No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)