FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807707

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807707
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19895
Sequences flagged as poor quality0
Sequence length150
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA698735.11937672782106No Hit
CATAGACCAGCTTTGCATGAGTGTGGTTAATGAAGCTCTTCCATGTCCCA7003.5184719778838907No Hit
CATAGACCTCCTTTCCTCCACGGCAAACACTCAAAACAGCCCTCTATGTG6783.4078914300075396No Hit
CATAGATACGATCATAAGGGTGGGGCGAAAGTGATCAGAAGCTCTATGTG5542.784619251068108No Hit
CATAGACACCATTGGAGACCTGAGCATCCCTCATTACTCTGGTTCTATGT3431.7240512691631065No Hit
CATAGACTTTTCCTCCAATATAGCTGCACTTAATCTATGTGTAGAACCAT3081.5481276702689117No Hit
CATAGACCAGCTTTGCATGAGTGTGGGAAGTAGGGAATGATTACAAGTTC3041.5280221161095753No Hit
CATAGACACACCCAACTCTGCTCAGTCTGCATAGCCACATCTATGTGTAG2511.2616235234983664No Hit
CATAGATGGTGGGTTCTGGAGAGAGCATCCCTCATTACTCTGGTTCTATG2321.166122141241518No Hit
CATAGACCTGACCTCATGATCTGCCTGTGTTCTTTGCATGATCTATGTGT1280.6433777330987686No Hit
CATAGAGGTGAGCGGCTGTCTCCATCAGAGCCTAGTCCTTAACTAGCTGC1190.5981402362402614No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTATTAGCGAGACTCTA1180.5931138477004273No Hit
CATAGACCAGCTTTGCATGAGTGTGGCCTGTGTTCTTTGCATGATCTATG1160.583061070620759No Hit
CATAGACACCTTGTATATGCCAGGACTGTCAGAGGAGCAGCAGAAAGTGA1150.5780346820809248No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTTAACAACTCCACAAA1140.5730082935410907No Hit
CATAGACACACCCAACTCTACTCAGTCTGCATAGCCACATCTATGTGTAG1060.5327971852224177No Hit
CATAGATGTTTGAAACTCCTCTACCTAAGACACTGGGGGCACAAAGTTCT1020.5126916310630811No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTACTGTAGCAAAGCTGCTA980.4925860769037446No Hit
CATAGAGTTATTCAGAGAGAGGGGAAATGAGAGAAAACTACCCCAGGCTC890.4473485800452375No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTATAGGCAAAGCTGCT880.4423221915054034No Hit
CATAGACCTGACCTCATGATCTGCCTATGTGTAGAACCATGTCGTCAGTG850.42724302588590096No Hit
CATAGAGTTATTCAGAGAGAGGGGAAATGAATGTTGGAGAGGCACATCTA820.4121638602663986No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCCGGATTCAAGCAATTCTTCTATGT800.4021110831867303No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA770.38703191756722793No Hit
CATAGAGGGGAGACACTGGCTATAAGAACTTGGTCTCATAGAGGGGAGAC740.3719527519477256No Hit
CATAGATTAGGGGTGACGGACTAGCCATGCTGAAGTCCCATGATCTATGT720.3618999748680573No Hit
CATAGATGACCTGTTAATCTGCCCCCTACCCACCTTAAATTCTATGTGGG690.3468208092485549No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGAGACTTGGTCTCATAGAGGGG660.3317416436290525No Hit
CATAGACTGGCGGTGATTGCTTTCCTCCACGGCAAACACTCAAAACAGCC590.29655692385021365No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTATTAGCACCAGTGTA560.28147775823071125No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTTACGGTAGCAAAGCT560.28147775823071125No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTGTTCTGCACACTACAATT540.27142498115104297No Hit
CATAGAGGTGAGCGGCTGTCTCCATGTCGTCAGTGTGGAAAGCTGTCTGT530.26639859261120885No Hit
CATAGACCAGCTTTGCATGAGTGTGGCATGGAGAAGGGTCTATGTGTAGA520.26137220407137474No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCACGGCAAACACTCAAAACAGCCCT520.26137220407137474No Hit
CAGTTTCCCCTCCTTCTATGTGTAGAACCATGTCGTCAGTGTAGATCTCG480.24126664991203822No Hit
CATAGACTTACTGCCCTCACTCCGTCTGCATAGCCACATCTATGTGTAGA460.23121387283236997No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA460.23121387283236997No Hit
CATAGAGTTATTCAGAGAGAGGGGAAATGATCTAGGAAAGCTGTCTGTGT450.2261874842925358No Hit
CATAGACCTGACCTCATGATCTGCCTGCCTTGGCCTCCCAAAATGCTGGG450.2261874842925358No Hit
CATAGATGTGAGCACTACTGATAATCCCTGATGTGGCATGGAGAAGGGTC450.2261874842925358No Hit
CATAGATGATGTGAAAAGGACCCATGGCGTCAGTGTACCTAGTGATTACC450.2261874842925358No Hit
CATAGACCAGCTTTGCATGAGTGTGGGCAGTAAGACCAGTGTAGCAGACC440.2211610957527017No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCAAGCAGATCTGTGTTCTATGTGTA430.21613470721286754No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCCAGAGACTTGGCCTCAGTTTCCCC430.21613470721286754No Hit
CATAGAGGGGAGACACTGGCTATAAGAACAGAGACTTGGTCTCATAGAGG430.21613470721286754No Hit
CATAGAAAGGCAATGTTCAAGTGGTTTTGAGGTAAAACTATTAGCGAGAC420.21110831867303345No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCCTTGGCCTCAGTTTCCCCTCCTTC400.20105554159336514No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTACACTGATGTGGCATGGA400.20105554159336514No Hit
CATAGACCTGACCTCATGATCTGCCTTTTGCTCATCCATTGTTGATCTAT400.20105554159336514No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGACACTGGGGGCACAAAGTTCT380.1910027645136969No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG380.1910027645136969No Hit
CATAGAGGTGAGCGGCTGTCTCCAGAAGTCCGCGCAGAGCCTTCAGGTCA370.1859763759738628No Hit
CATAGAGGCTGGGTGACTTGGTGAATCATAGAACCATAGAAATACCTGGG370.1859763759738628No Hit
CATAGATGACCTGTTAATCTGCCCCCGTATGATGTGGCATGGAGAAGGGT370.1859763759738628No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGGGAGACACTGGGGGCACAAAG360.18094998743402865No Hit
CATAGATACGATCATAAGGGTGGGGCTGGGCTCAGTGGCTTATGCCTGTA350.17592359889419454No Hit
CATAGACCTGACCTCATGATCTGCCTACCTCCGCCTCCCAAAGTGCTGGG350.17592359889419454No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA350.17592359889419454No Hit
CATAGAGCCAAAGAGATGCTGAAAGGCCTGTGTTCTTTGCATGATCTATG330.16587082181452625No Hit
CATAGAGGGGAGACACTGGGGGCACAAAGTTCTATGTGTAGAACCATGTC320.16084443327469214No Hit
CATAGATTAGGGGTGACGGACTAGCCGGTTTTTGGGCCGGGGGCGGTGGT320.16084443327469214No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA320.16084443327469214No Hit
CATAGACTTTTCCTCCAATATAGCTGCACTTAATCTACCTCTCTCATAGC320.16084443327469214No Hit
CATAGACCTGACCTCATGATCTGCCTGCCTCGGCCTCCCAAAGTGCTGGG310.155818044734858No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGACTTGGTCTCATAGAGGGGAG300.15079165619502388No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTACGGTAGCAAAGCTG290.14576526765518974No Hit
CATAGACTGGCGGTGATTGCTTTCCTGATGTTTTAAAATGAGCACCTAAC290.14576526765518974No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCCTACACATGAATGTTGGAGAGGCA290.14576526765518974No Hit
CATAGAGTTATTCAGAGAGAGGGGAAATGAGACTGATGTGGCATGGAGAA290.14576526765518974No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA280.14073887911535563No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTTGTCTCTTTCCCTCCTTCCCTCC280.14073887911535563No Hit
CATAGACCTGACCTCATGATCTGCCTGCCTCACCTTCCCAAAGTGCTGGG270.13571249057552148No Hit
CATAGACTTACTGCCCTCACTCCGTCGCCAGGCTGGAGTGCAGTGGCACG270.13571249057552148No Hit
CATAGACCAAACACAGAAGACATGGCAAACACTCAAAACAGCCCTCTATG270.13571249057552148No Hit
CATAGAGGGGAGACACTGGCTATAAGAAATACCTGGGCGACCTCTCTATG270.13571249057552148No Hit
CATAGACCTGACCTCATGATCTGCCTGCCTTGGCCTCCCAAAGTGCTGGG270.13571249057552148No Hit
CATAGATGATGTGAAAAGGACCCATGGCGTCAGTGTGGGAAGTAGGGAAT270.13571249057552148No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGGGGAGACACTGGGGGCACAAA260.13068610203568737No Hit
CATAGACTTACTGCCCTCACTCCGTCTACGGTAGCAAACACTCAAAACAG260.13068610203568737No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGGGCCTTCAGGTCA260.13068610203568737No Hit
CATAGACTTACTGCCCTCACTCAGTCTGCATAGCCACATCTATGTGTAGA260.13068610203568737No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA250.12565971349585323No Hit
CATAGACCTGACCTCATGATCTGCCTGGGCCTCAGTTTCCCCACCTGTGA240.12063332495601911No Hit
CATAGAGGGGAGACACTGGCTATAAGAATAGAGGGGAGACACTGGGGGCA240.12063332495601911No Hit
CATAGATACGATCATAAGGGTGGGGCATGGTGGCTCACATCTGTAATCCC240.12063332495601911No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTTCCCTTGCCCTGTGGCCCTGGCT240.12063332495601911No Hit
CATAGACACCTTGTATATGCCAGGACTGATGGCGTGGGCCTGTAGTCCCA240.12063332495601911No Hit
CATAGATGTGAGCACTACTGATAATCCCTGATGTTTTAAAATGAGCACCT240.12063332495601911No Hit
CATAGACTTACTGCCCTCACTCCGTCACCCAGGCTGGAGTACAGTGGCAC240.12063332495601911No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTTCTATGTGTAGAACCATGTCGTC230.11560693641618498No Hit
CATAGACCTCCTTTCCTCCACGGCAAAGCTGCTATGGGATCTTCTATGTG230.11560693641618498No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCTGCGCAGAGCCTTCAGGTCA230.11560693641618498No Hit
CATAGATTAGGGGTGACGGACTAGCCCTAGCCATGCTGAAGTCCCATGAT230.11560693641618498No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGTCTTCAGAACGCGGCAAATGGTC230.11560693641618498No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGCCCGCGCAGAGCCTTCAGGTCA220.11058054787635085No Hit
CATAGAAAGGCAATGTTCAAGTGGTTTTCTATGAGGGGCGAAAGTGATCA220.11058054787635085No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCCATGCTGAAGTCCCATGAT220.11058054787635085No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGGAGACACTGGCTATAAGAGGG220.11058054787635085No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA220.11058054787635085No Hit
CATAGACTGGCGGTGATTGCTTTCCTCCCGGATTCAAGCAATTCTTCTAT220.11058054787635085No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA220.11058054787635085No Hit
CATAGATTAGGGGTGACGGACTAGCCAAGTCTCTGCCTTTCTGGGTAGCT210.10555415933651673No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGCAGAGACTTGGTCTCATAGAG200.10052777079668257No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTCATAGAGTGGGCGAA200.10052777079668257No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)