FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807714

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807714
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences155749
Sequences flagged as poor quality0
Sequence length150
%GC41

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG2023312.990773616524024No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTCATCTATGA67344.323623265638945No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTAACTTCATAGCACATCAT64234.123943010870054No Hit
CATAGAGTCTGGAGGAAGGTGTCAGCCTCCAGACTCAACCCTTCTATGAG59363.8112604254280926No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCCTTTCCTCAGTTCTTTTTCTA55373.5550790053226664No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGACACTTTGGACTCTGCCTCTA35052.2504157330063115No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAATTTGCAAATACAGAATCA29931.9216816801391983No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCGAGGCAGAGGACAGGTATC28471.8279411103763104No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGGTGGCTCACACCTATAATCCCA28091.8035428798900794No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAGTGGCTCACACCTATAATCCCA27311.753462301523605No Hit
CATAGATCACCCAGCCCATATTGCACAACTGGCATCTGGTGATCTATGAG22561.4484844204457172No Hit
CATAGAATACAACACACTCTCTGCCCTGTTCACTCTGATGGTACTTCTAT20441.3123679766804281No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACATTAGCTTAGTTAATTA18731.2025759394923885No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTAATGGAGGAGTATGGGATCTAT17751.1396541871857926No Hit
CATAGATGGAAATTTTTGGCCAGGCGTGGTGGCTCACACCTATAATCCCA16921.086363315334288No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAGCAAACTAACACAGAAA16451.0561865565750022No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTGGAGAGAAATGCTGCTCTATGAG16321.047839793513923No Hit
CATAGACTCTGTTTTGCTACCTGGGGTCATTCTTCTCTGGGGGCTCTATG16201.04013508914985No Hit
CATAGAATACAACACACTCTCTGCCCTGCACATCTACAAGGACACTCATC14960.9605198107210962No Hit
CATAGATGTGCCACATACCTTTCCCAGTGTAGAACAGCTAAAAATCTTGG14830.9521730476600172No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTGGGGAAAGAGAGCACTCTATGA14400.9245645236887556No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCATAGAACAGCTAAAAATCTTGGA14380.9232804062947434No Hit
CATAGACCTGTGTGTGAGGCATTGTTGCCTCTTGTAGAAGGGATGGTCTA13920.8937457062324637No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGCCGCTCACCTCTATGAGACCAA13740.8821886496863542No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTTGGAGAGAAATGCTGCTCTAT13530.8687054170492265No Hit
CATAGATGTGCCACATACCTTTCCCAGGACACTTTGGACTCTGCCTCTAT13490.8661371822612023No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGCAGCAACAAAAGTCACTCCTCT13390.8597165952911415No Hit
CATAGAACAGTAAGTCAGCTCCTCCTATAGAACATTAGCTTAGTTAATTA13310.8545801257150929No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGACTACACATAGAACAGCTAA12630.8109201343186795No Hit
CATAGATGCTTCTGATATGTTGCCGTATGCCTCTTGTAGAAGGGATGGTC11640.7473563233150775No Hit
CATAGATTTGTGTGAGAAGGAGCAAGAACATTAGCTTAGTTAATTAGGGA11310.7261683863138768No Hit
CATAGATGTGCCACATACCTTTCCCAGACATGTGTGAGAGGGAAGGACTC10950.7030542732216579No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGTCAGCCTCCAGACTCAACCCTT10370.6658148687953053No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTAGTTTTGGTAGAGACAGGGT10280.6600363405222506No Hit
CATAGATGTGGTCTCAGTGCCCTATGGTGGAGGGCTTTGCTGTTTCTATG9860.6330698752479952No Hit
CATAGACCTGTGTGTGAGGCATTGTTGTAGAATTTGCAAATACAGAATCA8860.5688640055473871No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAAGCAAACTAACACAGAA8450.5425395989701378No Hit
CATAGACGGGCCAGAGAATAGTGCTAGAATTAACTTAGCAACCTGTACAT8370.5374031293940892No Hit
CATAGAGAACAGCCCTGAGAGAATGCTGCAACAGAGAAGTCAAGAGGAAA8290.5322666598180406No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAACAAGATCGTGCCTCTATGAGAC8120.5213516619689372No Hit
CATAGATGCCTCAAAGAGCTGGAGACAGCCGCTCACCTCTATGAGACCAA7460.4789757879665359No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTCTAACTTCATAGCACATCATG7380.47383931839048726No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGGTACTTTTGGTAGAGACAGGG7380.47383931839048726No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGGTAATGGAGGAGTATGGGATC7250.46549255532940825No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGACACTTTGGACTCTGCCTCTATGA6400.41091756608389135No Hit
CATAGATGATCCATCTACCTCTGCTTCAGTGTAGAACAGCTAAAAATCTT6320.4057810965078427No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCCCTCATTATCCCTGTGCCT6190.39743433344676365No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCCCTCATTATCCCTGTGCCTCTAT5940.3813828660216117No Hit
CATAGACCCCATGTGCAGTGTAAGCTACACTGACGACATGTGTGAGAGGG5710.3666155159904718No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTATTTTTGGTAGAGACAGGGT5370.3447855202922651No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG5340.34285934420124686No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCTAACTTCATAGCACATCATGTCT5240.33643875723118605No Hit
CATAGATGCTTCTGATATGTTGCCGTAGGAGAGGAGGGGGCAGAATATCT5160.3313022876551374No Hit
CATAGAACATCTACAGAACTCTCTACCCAGACGACATGTGTGAGAGGGAA4930.3165349376239976No Hit
CATAGAAGGAGCTGGACTGGATGGACTACAAGTACCCACCACCTCTATGA4920.3158928789269915No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGACGCAAACTAACACAGAAAC4800.3081881745629185No Hit
CATAGACCTGTGTGTGAGGCATTGTTGTTTCTATGAGACCAAGTCTCTGC4770.3062619984719003No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGCTGAGAAAGGAGGATCAC4710.30240964628986383No Hit
CATAGAGAACAGCCCTGAGAGAATGCAGAGAACAGCTAAAAATCTTGGAG4690.30112552889585165No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGGTGGGGAAAGAGAGCACTCTA4660.29919935280483345No Hit
CATAGATCATGGGACTTCAGCATGGCTGAGAAAGGAGGATCACTCTATGA4640.29791523541082127No Hit
CATAGATGTGCCACATACCTTTCCCAGTACACTGACGACAGTGAAACAAG4450.28571612016770576No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGGTGGGGAAAGAGAGCACTCTATG4330.27801141580363276No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTTGTATTTTTGGTAGAGACAGG4280.2748011223186024No Hit
CATAGAACATCTACAGAACTCTCTACCCATACGGAGATAGAGAGGTTGGT3700.2375617178922497No Hit
CATAGATGCTTCTGATATGTTGCCGTAGTACGGTAGCAGAATTTGCAAAT3530.22664672004314634No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGATGGCTCACACCTATAATCCCA3450.22151025046709769No Hit
CATAGATGATCCATCTACCTCTGCTTCATAGCAGGCTGAGAAAGGAGGAT3400.2182999569820673No Hit
CATAGAAGGAGCTGGACTGGATGGACCTGGAAGCCATTATCCTAAGCAAA3130.20096437216290314No Hit
CATAGAGAACAGCCCTGAGAGAATGCCACATAGAGAACAGCTAAAAATCT2940.1887652569197876No Hit
CATAGAATACAACACACTCTCTGCCCTGCCTCTTGTAGAAGGGATGGTCT2900.18619702213176328No Hit
CATAGAATACAACACACTCTCTGCCCTGCTGAGATTGGCCTGTGTCTATG2880.18491290473775113No Hit
CATAGAGAACAGCCCTGAGAGAATGCGGTTCTACACATAGAGAACAGCTA2850.18298672864673288No Hit
CATAGAAGGAGCTGGACTGGATGGACTGGTGGAGGGCTTTGCTGTTTCTA2670.17142967210062343No Hit
CATAGAGAACAGCCCTGAGAGAATGCCATGGTTCTACACATAGAGAACAG2600.16693526122158087No Hit
CATAGAAGGAGCTGGACTGGATGGACCTAGAGGCTATTACACTTAGCAAA2590.1662932025245748No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTTTGGACTCT2590.1662932025245748No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGGTACTCGAGGCAGAGGACAGGT2580.1656511438275687No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTGGTTCTACACATAGATG2520.16179879164553224No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGAGGAAGGGTAATGGAGGAGTATG2500.16051467425152008No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTGTTCTACACATAGAACA2430.1560202633724775No Hit
CATAGAGCCTCCACTCTTCTCGCTATCACACGGACTACAAGTACCCACCA2380.1528099698874471No Hit
CATAGAGAACAGCCCTGAGAGAATGCATAGAGAACAGCTAAAAATCTTGG2260.14510526552337413No Hit
CATAGACTCTGTTTTGCTACCTGGGGTGGGAATAGAGCCCAGAGAAGGGA2240.14382114812936198No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTGTATTTTTGGTAGAGACAGGG2170.1393267372503194No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTAGTTTTGGTGGAGACAGCCG2140.1374005611593012No Hit
CATAGAAGGAGCTGGACTGGATGGAGACAGCCGCTCACCTCTATGAGACC2100.13483232637127687No Hit
CATAGAGGCAGGTGGGTGGTGGAGGGCTTTGCTGTTTCTATGAGACCAAG1940.12455938721917957No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCTTGACACCCCAGCTGTTCACCCG1910.12263321112816133No Hit
CATAGAGAACAGCCCTGAGAGAATGTAGAGAACAGCTAAAAATCTTGGAG1760.11300233067307014No Hit
CATAGAACATCTACAGAACTCTCTACCCAACACTGACGACATGGTTCTGC1760.11300233067307014No Hit
CATAGAACTCTGCAACAATATCATTCTCCTCTAACTTCATAGCACATCAT1730.11107615458205188No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGCTTTGCTGTTTCTATGAGACCAAG1710.10979203718803975No Hit
CATAGAACAGTAAGTCAGCTCCTCCTACACTGACGACATGTGTGAGAGGG1680.10786586109702148No Hit
CATAGATTTGTGTGAGAAGGAGCAAGACCAAAGCTAGAAACTCCCATCTA1660.10658174370300932No Hit
CATAGACCACCGTGCCCAGATAAGTTTGTATTTTTGGTAGAGACAGGGTT1600.10272939152097284No Hit
CATAGATGATCCATCTACCTCTGCTTCAGATGATCCATCTACCTCTAACT1580.10144527412696068No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGGTGCAAATTGTCAGTGTGTC1580.10144527412696068No Hit
CATAGAGTCTGGAGGAAGGTGTCAGCCTCCAGACTCAATCCTTCTATGAG1570.1008032154299546No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)