FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807717

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807717
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17067
Sequences flagged as poor quality0
Sequence length150
%GC39

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGACCTCCTTTCCTCCACGGCAAACACTCAAAACAGCCCTCTATGTG14248.343587039315638No Hit
CATAGATACGATCATAAGGGTGGGGCGAAAGTGATCAGAAGCTCTATGTG10205.976445772543506No Hit
CATAGACCAGCTTTGCATGAGTGTGGGAAGTAGGGAATGATTACAAGTTC7884.617097322317924No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCCGGATTCAAGCAATTCTTCTATGT7884.617097322317924No Hit
CATAGACCTGACCTCATGATCTGCCTGTGTTCTTTGCATGATCTATGTGT7054.1307786957285995No Hit
CATAGACACCATTGGAGACCTGAGCATCCCTCATTACTCTGGTTCTATGT6783.9725786605730353No Hit
CATAGACACACCCAACTCTGCTCAGTCTGCATAGCCACATCTATGTGTAG5112.99408214683307No Hit
CATAGACTGGCGGTGATTGCTTTCCTCCCGGATTCAAGCAATTCTTCTAT4792.8065858088709206No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTATTAGCGAGACTCTA4132.419874611823988No Hit
CATAGACACACCCAACTCTACTCAGTCTGCATAGCCACATCTATGTGTAG3532.068318978144958No Hit
CATAGAGGTGAGCGGCTGTCTCCATGATCTATGTGTAGAACCATGTCGTC3401.9921485908478351No Hit
CATAGATGGTGGGTTCTGGAGAGAGCATCCCTCATTACTCTGGTTCTATG3211.880822640182809No Hit
CATAGATGTTTGAAACTCCTCTACCTAAGACACTGGGGGCACAAAGTTCT2841.664029999414074No Hit
CATAGACCAGCTTTGCATGAGTGTGGCATGGAGAAGGGTCTATGTGTAGA2771.6230151754848539No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTTACGGTAGCAAAGCT2621.5351262670650965No Hit
CATAGAGTTATTCAGAGAGAGGGGAAATGAATGTTGGAGAGGCACATCTA2411.412081795277436No Hit
CATAGACTTTTCCTCCAATATAGCTGCACTACTTGGCCTCAGTTTCCCCT2161.2656002812445069No Hit
CATAGACTTACTGCCCTCACTCCGTCTGCATAGCCACATCTATGTGTAGA1711.0019335559852345No Hit
CATAGAGGGGAGACACTGGGGGCACAAAGTTCTATGTGTAGAACCATGTC1440.8437335208296712No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCACGGCAAACACTCAAAACAGCCCT1410.8261557391457197No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCCATGCTGAAGTCCCATGAT1390.8144372180230854No Hit
CATAGACCAAACACAGAAGACATGGCAAACACTCAAAACAGCCCTCTATG1320.7734223940938654No Hit
CATAGACTGGCGGTGATTGCTTTCCTCCACGGCAAACACTCAAAACAGCC1310.7675631335325482No Hit
CATAGATGTTTGAAACTCCTCTACCTAAGATGGCCTGTGTTCTTTGCATG1300.761703872971231No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTATTAGCAAAGCTGCT1280.7499853518485967No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGAGACTTGGTCTCATAGAGGGG1200.7031112673580594No Hit
CATAGACCAGCTTTGCATGATGTGGCATGGAGAAGGGTCTATGTGTAGAA1150.6738149645514736No Hit
CATAGACCAGCTTTGCATGAGTGTGGCCTGTGTTCTTTGCATGATCTATG1080.6328001406222534No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGACTTGGTCTCATAGAGGGGAG980.5742075350090818No Hit
CATAGACTTACTGCCCTCACTCAGTCTGCATAGCCACATCTATGTGTAGA960.5624890138864475No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCAAGCAGATCTGTGTTCTATGTGTA900.5273334505185445No Hit
CATAGAGGGGAGACACTGGCTATAAGAATAGAGGGGAGACACTGGGGGCA900.5273334505185445No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGACACTGGGGGCACAAAGTTCT760.4453038026601043No Hit
CATAGAGCCAAAGAGATGCTGAAAGGACTTGGCCTCAGTTTCCCCTCCTT760.4453038026601043No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGGGGAGACACTGGGGGCACAAA690.40428897873088415No Hit
CATAGAGGGGAGACACTGGCTATAAGAACCATGTCGTCAGTGTACCAGTG660.3867111970469327No Hit
CATAGACCTCCTTTCCTCCACGGCAAAGCTGCTATGGGATCTTCTATGTG620.36327415480166403No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGAGGGGAGACACTGGGGGCACA610.3574148942403469No Hit
CATAGATGGTGGGTTCTGGAGAGAGGGCGAAAGTGATCAGAAGCTCTATG600.3515556336790297No Hit
CATAGAGGCTGGGTGACTTGGTGAATGTTGGAGAGGCACATCTATGTGTA570.33397785199507823No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTAGATGATGTGGCATGGAG560.32811859143376104No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGCAGAGACTTGGTCTCATAGAG540.3164000703111267No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTTCTATGTGTAGAACCATGTCGTC530.3105408097498096No Hit
CATAGACTTTTCCTCCAATATAGCTGCACTTAATCTATGTGTAGAACCAT530.3105408097498096No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTGAGACTTGGCCTCAGTTTCCCCT530.3105408097498096No Hit
CATAGACCAGCTTTGCATGAGTGTGGGCGAAAGTGATCAGAAGCTCTATG510.29882228862717525No Hit
CAGTTTCCCCTCCTTCTATGTGTAGAACCATGTCGTCAGTGTAGATCTCG470.2753852463819066No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTATAGATTTATCCAGCATG460.26952598582058945No Hit
CATAGACCTGACCTCATGATCGGCCTGTGTTCTTTGCATGATCTATGTGT440.2578074646979551No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTATTTTGAGGTAAAAC410.24022968301400366No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGGTCTCATAGAGGGGAGACACT400.2343704224526865No Hit
CATAGATGTGAGCACTACTGATAATCCCTACACTCCCGGATTCAAGCAAT390.2285111618913693No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA380.22265190133005214No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGTAGCAGAGACTTGGTCTCATA360.2109333802074178No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTTCTATGGCCTCAGTTTCCCCTCC340.1992148590847835No Hit
CATAGACACCTTGTATATGCCAGGACTGACTTGGTCTCATAGAGGGGAGA330.19335559852346634No Hit
CATAGACTTACTGCCCTCACTCCGTCTACGGTAGCAAACACTCAAAACAG320.18749633796214918No Hit
CATAGAGGCTGGGTGACTTGGTGAATTGGCCTCAGTTTCCCCTCCTTCTA290.16991855627819769No Hit
CATAGACTTACTGCCCTCACTCCGTCGGTAGCAGAGACTTGTCTCATAGA290.16991855627819769No Hit
CATAGACCAAACACAGAAGACATGGCAGCATTTAATCTATGTGTAGAACC280.16405929571688052No Hit
CATAGAGGGGAGACACTGGCTATAAGAACAGAGACTTGGTCTCATAGAGG280.16405929571688052No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTACGGTAGCAAACACTCAAAACAG270.15820003515556336No Hit
CATAGATACGATCATAAGGGTGGGGCCTGTGTTCTTTGCATGATCTATGT260.15234077459424622No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGGGAGACACTGGGGGCACAAAG260.15234077459424622No Hit
CATAGACCAAACACAGAAGACATGGCACACTCCTCCCGGATTCAAGCAAT260.15234077459424622No Hit
CATAGACCAGCTTTGCATGAGTGTGGCCTCAGTTTCCCCTCCTTCTATGT250.14648151403292906No Hit
CATAGACACACCCAACTCTGCTCAGTGTATGAATGTTGGAGAGGCACATC250.14648151403292906No Hit
CATAGATGGTGGGTTCTGGAGAGAGACACTGGGGGCACAAAGTTCTATGT230.13476299291029473No Hit
CATAGACTGGCGGTGATTGCTTTCCTAGACTCAGTCTGCATAGCCACATC230.13476299291029473No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTACGGTAGCAGAGACT230.13476299291029473No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA210.12304447178766038No Hit
CATAGATGACCTGTTAATCTGCCCCCACTCAGTCTGCATAGCCACATCTA210.12304447178766038No Hit
CATAGAGGGGAGACACTGGCTATAAGAAAGGGGAGACACTGGGGGCACAA200.11718521122634325No Hit
CATAGATACGATCATAAGGGTGGGGCCATGCTGAAGTCCCATGATCTATG200.11718521122634325No Hit
CATAGATGACCTGTTAATCTGCCCCCCTTTTGCTCATCCATTGTTGATCT200.11718521122634325No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTATGCTGAAGTCCCATGAT200.11718521122634325No Hit
CATAGATTAGGGGTGACGGACTAGCCTACGGTAGCAGAGACACTGGGGGC190.11132595066502607No Hit
CATAGACCAGCTTTGCATGAGTGTGGGAGGATTGCTTGAGTCTATGTGTA180.1054666901037089No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)