FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807718

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807718
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences200165
Sequences flagged as poor quality0
Sequence length150
%GC38

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGAATTTGCACACCACGGGACATGGATGAAGCTGGATCTATGAGA165938.289661029650539No Hit
CATAGATGTCTCCCAGGCTAGAGTGAGCCCTTGTCCCTTTCTATGAGACC116625.826193390452876No Hit
CATAGATCATGGGACTTCAGCATGGTGGGTGCCTGATTGTTCTATGAGAC107195.355082057302725No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAATCAGGGTTGGTTCTATGAGACC99804.9858866435190965No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG89384.46531611420578No Hit
CATAGACCTTCCTGTTGGCCACACAGAATTAGCGGAGAGTGAGAACTCTA75203.7569005570404412No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGCAACAGAACAACAACATCTATG74053.6994479554367645No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAACAGAACAACAACATCTATG66223.308270676691729No Hit
CATAGAGGGTGTTTTTCGGTGTTACAACCAATGCTCTTTCATCTATGAGA65203.2573127170084684No Hit
CATAGAGGGTGTTTTTCGGTGTCACAACCAATGCTCTTTCATCTATGAGA58242.9095995803462142No Hit
CATAGAACAAGGCCAGAATTACCCTGATACCAACACAGATGCACACTGGG52832.6393225588889164No Hit
CATAGAGAATTTGCACACCACGGGACCATGCTCACACCTTGATCTATGAG46942.3450653211100843No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCAGGCCTGAGATTGCTGCTAT46582.327080158868933No Hit
CATAGACAGGAGGAGGAAGAAGAGGAAGACAAGAACCCGGGAGGAGGTTG42592.1277446106961757No Hit
CATAGACAGGAGGAGGAAGAAGAGGAATTCTTGCCAGGGATCTATGAGAC39631.9798666100467113No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGTGAGAAATGATGATGGCT31621.5796967501811006No Hit
CATAGAACAAGGCCAGAATTACCCTGGGAGAGGCTGTTTGAGATCTATGA22171.1075862413508855No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGAGAGGCTGTTTGAGATCT22011.099592835910374No Hit
CATAGATTAGTTCTTATTCTTGGTATGGCACACACTGACTTCAGTTGACT20981.0481352883870805No Hit
CATAGACCACACCCAAACACCACGTACACTGACGACATGGTTCTACACAT18730.9357280243798866No Hit
CATAGAGAAGAGAAGGCGACAATGGCAGAAAGAAGCCCCAAGGGCAGGTC18310.9147453350985437No Hit
CATAGATTAGTTCTTATTCTTGGTATGGCACTGGGTGAGAAATGATGATG16310.8148277670921489No Hit
CATAGACCCTTAGAGTTTCAGCCTCCCTTAGAGGCCACATCGCACCAGAG15290.7638698074088877No Hit
CATAGATTCTCCCTTGTGCTTTTGGTAGAGCTTGGGTGACAGAGTGAGTC15100.7543776384482802No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTGGGAGAGGCTGTTTGAGATC15010.7498813478879924No Hit
CATAGACAGCTCACAGACTGCATACTACACTGACGACATGGTGGGTGCCT14450.7219044288462019No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACATGGATGAAGC13720.6854345165238678No Hit
CATAGATTCTCCCTTGTGCTTTTGGTTCCCTTGTGCTCATACAGAATTAG12600.6294806784402868No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGTGAGCCCTTGTCCCTTTCTATG12140.606499637798816No Hit
CATAGAACAAGGCCAGAATTACCCTGGGTGAGAAATGATGATGGCTCTAT10980.548547448355107No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGTTTAAAAATTTTTCTACAAC9930.49609072515174985No Hit
CATAGAGGGCCAGAAGTTTGTTTACCTACACTGGGACATGGATGAAGCTG9630.48110308995079054No Hit
CATAGATTAGTTCTTATTCTTGGTATGGCACACACTCAGACATGTTTCCT9430.47111133315015113No Hit
CATAGACCCTTAGAGTTTCAGCCTCAGACATGTTTCCTAGTTTCAGTTCT9420.4706117453101191No Hit
CATAGAGAAGAGAAGGCGACAATGGCTCTCTGGGTGAGAAATGATGATGG9030.4511278195488722No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTAGACTTGTGCTCATACAGAAT8600.4296455424274973No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTGGGTGAGAAATGATGATGGC7780.3886793395448755No Hit
CATAGAATGCAGGAGAATATACACAGGTTACACTGGGACATGGATGAAGC7510.37519046786401217No Hit
CATAGATGTCTCCCAGGCTAGAGTGCGCCCTTGTCCCTTTCTATGAGACC7270.3632003597032448No Hit
CATAGAGGGCCAGAAGTTTGTTTACCTGACATGGTGGGTGCCTGATTGTT7210.360202832663053No Hit
CATAGAGGGCCAGAAGTTTGTTTACCTGGACTTCAGTTGACTATAAGAAA6440.32173456898059105No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACCATGCTCACAC6130.30624734593959985No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTGGTCTCATAGAGAAACTTTT6030.3012514675392801No Hit
CATAGAGCAAAAGAGAAACATTAAGCCATAGTCTTTCTCTTAATCATTCT6020.30075187969924816No Hit
CATAGACAGCTCACAGACTGCATACTCTGACGACATGGTGGGTGCCTGAT5760.2877625958584168No Hit
CATAGAGAAGAGAAGGCGACAATGGCGTGTTACAACCAATGCTCTTTCAT5690.284265480978193No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGAGTGAGCCCTTGTCCCTTTCTA5520.27577248769764945No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCTTGTGCTCATACAGAATTAG5350.2672794944171059No Hit
CATAGAACCCAAAGAGTGAGCCCTTGTCCCTTTCTATGAGACCAAGTCTC5120.2557889740963705No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTGGGACATGGATGAAGCTGG5110.2552893862563385No Hit
CATAGACCTTCCTGTTGGCCACACAGCCACCTTCCACGGTGGGAGTGAAC5080.2537906227362426No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAACAACAACATCTATGAGACCAAG4890.2442984537756351No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTTATAGGAAGAGGAGAGTGAAG4860.24279969025553919No Hit
CATAGAGAATTTGTACACCACGGGACATGGATGAAGCTGGATCTATGAGA4790.23930257537531535No Hit
CATAGAACCCAAAGAGTGGGCAACAGAACAACAACATCTATGAGACCAAG4780.2388029875352834No Hit
CATAGAGCAAAAGAGAAACATTAAGCCATAGTACACTCAGACATGTTTCC4680.23380710913496364No Hit
CATAGAACAAGGCCAGAATTACCCTGCACTGACGACATGACTCTTCACTA4560.22781205505457996No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGTGCTCATACAGAATTAGATC4440.22181700097419632No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTGACGACATGGTGGGTGCCT4440.22181700097419632No Hit
CATAGATGTCTCCCAGGCTAGAGTGCAACGGTGCGATCTCAGCTCCCTGA4180.20882771713336498No Hit
CATAGAACAAGGCCAGAATTACCCTGACACTGACGACATGGTTCTACACA3870.1933404940923738No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCACTGACGACATGGTTCTACACAT3620.18085079809157445No Hit
CATAGATGTCTCCCAGGCTAGAGTGCTCATACAGAATTAGATCTAGCTCT3490.1743561561711588No Hit
CATAGACAGCTCACAGACTGCATACTGCGTGAGTCTTGTCATTTAAAGTA3390.16936027777083906No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCAGGCAGTCTCAAACGTTGTG3380.16886068993080708No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAACCCAAAGAGTGAGCCCTTGTCC3270.16336522369045536No Hit
CATAGATGTCTCCTAGGCTAGAGTGAGCCCTTGTCCCTTTCTATGAGACC3210.16036769665026354No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCAGGCTAGAGTGAGCCCTTGT3170.15836934529013563No Hit
CATAGACAGGAGGAGGAAGAAGAGGAGGGACATGGATGAAGCTGGATCTA3070.1533734668898159No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAACACTGACGACATGGTTCTA2980.14887717632952815No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTACACTGACGACATGGTTCTAC2860.14288212224914446No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGACGACATGGGCAAC2820.14088377088901655No Hit
CATAGAGCTATCAGTATACTCCCACCATGGTGGGTGCCTGATTGTTCTAT2770.1383858316888567No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTGACGACATGGTTCTACACA2670.13338995328853698No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTCATGGTTCTACACATAGACT2670.13338995328853698No Hit
CATAGACAGCTCACAGACTGCATACTACACTGGGACATGGATGAAGCTGG2650.132390777608473No Hit
CATAGAGCTTCTTTCTGTTCATATTGAGGAATTCTTGCCAGGGATCTATG2560.12789448704818526No Hit
CATAGACTTGATGCCCAGGAAACCTCTGCCTCCCAGGTTCAAGCATGATT2420.12090025728773762No Hit
CATAGAGAAGAGAAGGCGACAATGGGACATGGATGAAGCTGGATCTATGA2360.11790273024754577No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGACACTGACGACATGGTGGGT2320.11590437888741789No Hit
CATAGAACAAGGCCAGAATTACCCTGGGCAACAGAACAACAACATCTATG2300.11490520320735394No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAATTCTTGCCAGGGATCTATG2240.11190767616716209No Hit
CATAGAGCAAAAGAGAAACATTAAGCCATAGTACACTGACGACATGGTGG2220.11090850048709816No Hit
CATAGAACAAGGCCAGAATTACCCTGGTACCAACACAGATGCACACTGGG2120.1059126220867784No Hit
CATAGAGAATTTGCACACCACGGGACTTCAGTTGACTATAAGAAACACCT2120.1059126220867784No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)