FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807719

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807719
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences200165
Sequences flagged as poor quality0
Sequence length150
%GC36

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGT170088.496989983263807No Hit
CATAGAAAGGGACAAGGGCTCACTCTAGCCTGGGAGACATCTATGTGTAG131526.570579272100517No Hit
CATAGAACAATCAGGCACCCACCATGCTGAAGTCCCATGATCTATGTGTA108745.432518172507681No Hit
CATAGAACCAACCCTGATTCTGCTGCTCACTCTTTGGGTTCTATGTGTAG101935.092298853445907No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA88564.424349911323159No Hit
CATAGATGTTGTTGTTCTGTTGCCCAATATGAACAGAAAGAAGCTCTATG78253.9092748482501936No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTGTGTGGCCAACAGGAAGGTCTA74973.745410036719706No Hit
CATAGATGTTGTTGTTCTGTTCCCCAATATGAACAGAAAGAAGCTCTATG67813.387705143256813No Hit
CATAGATGAAAGAGCATTGGTTGTAACACCGAAAAACACCCTCTATGTGT67003.3472385282142234No Hit
CATAGATGAAAGAGCATTGGTTGTGACACCGAAAAACACCCTCTATGTGT59212.9580596008293156No Hit
CATAGAGCAGCGTGTGTCCGTTAAAACATCAGCTAGAATCCTGTCACTTA57942.894611945145255No Hit
CATAGATAGCAGCAATCTCAGGCCTGGGAGACCCCATATCTACCAAAGAT47752.385531936152674No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAATTCTCTATGTG47692.3825344091124823No Hit
CATAGACTCACTCTGTCACCCAAGCTGGAGTGCAGTGGCATGACCTTAGC40802.0383183873304525No Hit
CATAGATCCCTGGCAAGAATTCCTCTTCTTCCTCCTCCTGTCTATGTGTA39301.9633802113256562No Hit
CATAGAGCCATCATCATTTCTCACCCAGGAAAGTTGGAACCTATCAGTGT31441.5707041690605252No Hit
CATAGATCTCAAACAGCCTCTCCCAGGGTAATTCTGGCCTTGTTCTATGT22581.1280693427921964No Hit
CATAGATCTCAAACAGCCTCTCCCAGGAAAGTTGGAACCTATCAGTGTCT22131.1055878899907576No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTCAGTGTGTGCCATACCAAG21671.0826068493492869No Hit
CATAGAGCCATCATCATTTCTCACCCAGTGCCATACCAAGAATAAGAACT16800.8393075712537158No Hit
CATAGACGGGAAGAGTAAGACCACCCAATTACCTTTCACGTAAGCAGATG16030.8008393075712538No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGTGTAGAACCATG15860.7923463142907101No Hit
CATAGACTCACTCTGTCACCCAAGCTCTACCAAAAGCACAAGGGAGAATC15590.7788574426098469No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGTATGCAGTCTGT15550.776859091249719No Hit
CATAGATCTCAAACAGCCTCTCCCAGAAGCTTTGAGATTTGTGTCTGTTC15340.7663677466090475No Hit
CATAGATCCCTGGCAAGAATTCCTCAATGCTCATTCTCACAACCCAATCT15270.7628706317288237No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAAATTCTCTTGACA13710.6849349286838358No Hit
CATAGAAAGGGACAAGGGCTCACTCTGCTGCTCACTCTTTGGGTTCTATG12990.6489646042015338No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAAGGGAACCAAAAGCACAA12870.64296955012115No Hit
CATAGAGCCATCATCATTTCTCACCCAGGGTAATTCTGGCCTTGTTCTAT11140.5565408537956187No Hit
CATAGATCCAGCTTCATCCATGTCCCAGTGTAGGTAAACAAACTTCTGGC9690.4841006169909824No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAGTGTGTGCCATACCAAGAAT9600.47960432643069467No Hit
CATAGATCAAGGTGTGAGCATGGTCCATTTCTGGTGAGGGCTCTCTTCCA9580.4786051507506307No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAGGCTGAAACTCTAAGGGTCT9510.47510803587040695No Hit
CATAGAGCCATCATCATTTCTCACCCAGAGAGCCATTGTCGCCTTCTCTT8900.4446331776284565No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAAGTCTAGAGGCAAGGGTA8630.4311443059475933No Hit
CATAGAGCCATCATCATTTCTCACCCAGAAGCTTTGAGATTTGTGTCTGT7840.39167686658506734No Hit
CATAGATGTTGTTGTTCTGTTGCCCACTCTTTGGGTTCTATGTGTAGAAC7730.3861814003447156No Hit
CATAGAAAGGGACAAGGGCGCACTCTAGCCTGGGAGACATCTATGTGTAG7550.3771888192241401No Hit
CATAGATCCAGCTTCATCCATGTCCCAGTGTAACCTGTGTATATTCTCCT7470.3731921165038843No Hit
CATAGAACAATCAGGCACCCACCATGTCAGGTAAACAAACTTCTGGCCCT7240.3617015961831489No Hit
CATAGATGCCAAGAAGAGAAAAGCAGCTGATGAAAATCATGCTTGAACCT6790.3392201433817101No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTCCAGGTAAACAAACTTCTG6410.32023580546049507No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAAATTCTCTTGAC6090.3042489945794719No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGAGTATGCAGTCTGTGAG5970.29825394049908827No Hit
CATAGAAAGGGACAAGGGCTCACTCTCTGCTGCTCACTCTTTGGGTTCTA5800.28976094721854473No Hit
CATAGATCCAGCTTCATCCATGTCCCTACAAAGGACATGAACTCATGTAG5770.2882621836984488No Hit
CATAGATGAAAGAGCATTGGTTGTAACACGCCATTGTCGCCTTCTCTTCT5640.2817675417780331No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAAGGGAGACCCCATATCTA5520.27577248769764945No Hit
CATAGATCTCAAACAGCCTCTCCCAGTATTTCATTATTAAAAGTTTCTCT5350.2672794944171059No Hit
CATAGAACCAACCCTGATTCTGCTGGGGCTAGCGGGTCTCCATTAGGAGT5300.264781555216946No Hit
CATAGATCCAGCTTCATCCATGTCCCAGTGTACCAAAAGCACAAGGGAGA5160.25778732545649835No Hit
CATAGAGGAAAGAACAACTGCGGACGCGTCTCCTTAAGAGCCGTAACACT5110.2552893862563385No Hit
CATAGATGTTGTTGTTCTGCTGCTCACTCTTTGGGTTCTATGTGTAGAAC4830.24130092673544326No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAGTGTACTATGGCTTAATGTT4770.2383033996952514No Hit
CATAGATGGTAAGATGACATAGTGAAGAGTCATGTCGTCAGTGCAGGGTA4640.23180875777483578No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTACCAAAAGCACAAG4640.23180875777483578No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAGGAAAGTTGGAACCTATC4410.2203182374541004No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACTCTAGCCTGGGAGACATCT3790.18934379137211801No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTGCTGCTCACTCTTTG3690.18434791297179828No Hit
CATAGAACAATCAGGCACCCACCATGGGTTTGGTATTTTGGAAATAGCCA3640.1818499737716384No Hit
CATAGACACAACGTTTGAGACTGCCTGGGAGACCCCATATCTACCAAAGA3490.1743561561711588No Hit
CATAGAAAGGGACAAGGGCTCACTCTAGCCTGGGAGACCCCATATCTACC3340.1668623385706792No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA3290.16436439937051933No Hit
CATAGATGCCAAGAAGAGAAAAGCAGCTCTATGTGTAGAACCATGTCGTC3050.15237429120975196No Hit
CATAGATCCAGCTTCATCCATGTCCCTCCTCTTCTTCCTCCTCCTGTCTA3030.151375115529688No Hit
CATAGATGTTGTTGTTCTGTTGCCCATGTCGTCAGTGTAGAAGCTTTGAG2790.13938500736892065No Hit
CATAGAACAATCAGGCACCCACCATGGTGGGAGTATACTGATAGCTCTAT2770.1383858316888567No Hit
CATAGATCCAGCTTCATCCATGTCCCAGTGTAGTATGCAGTCTGTGAGCT2750.13738665600879274No Hit
CATAGATGGTAAGATGACATAGTGAAGAGTCTATGTGTAGAACCATGAGA2730.1363874803287288No Hit
CATAGATCCCTGGCAAGAATTCCTCAATATGAACAGAAAGAAGCTCTATG2630.13139160192840907No Hit
CATAGATGTTGTTGTTCTGTTGCCCAGGGTAATTCTGGCCTTGTTCTATG2380.11890190592760971No Hit
CATAGATCCCTGGCAAGAATTCCCCAATATGAACAGAAAGAAGCTCTATG2330.11640396672744986No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTCAGGAAAGTTGGAA2300.11490520320735394No Hit
CATAGATCCAGCTTCATCCATGTCCCATTGTCGCCTTCTCTTCTCTATGT2290.11440561536732197No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTACTATGGCTTAATG2230.1114080883271301No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGCTGCTGCTCACTCTTTGGG2140.10691179776684236No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTCCCGTGGTGTGCAAATTCT2090.10441385856668249No Hit
CATAGATAGCAGCAATCTCAGGCCTCCTGTCCTAACAGCATTCTTTTTAT2090.10441385856668249No Hit
CATAGATGTTGTTGTTCTGTTGCCCATACGGTAGCAGAAGCTTTGAGATT2010.10041715584642669No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)