FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807725

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807725
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences27178
Sequences flagged as poor quality0
Sequence length150
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA875232.20251674148208No Hit
CATAGACCAGCTTTGCATGAGTGTGGTTAATGAAGCTCTTCCATGTCCCA10043.6941643976745895No Hit
CATAGACCTCCTTTCCTCCACGGCAAACACTCAAAACAGCCCTCTATGTG7312.6896754728088896No Hit
CATAGATACGATCATAAGGGTGGGGCGAAAGTGATCAGAAGCTCTATGTG5271.9390683641180368No Hit
CATAGACTTTTCCTCCAATATAGCTGCACTTAATCTATGTGTAGAACCAT5061.8617999852822136No Hit
CATAGATGTGAGCACTACTGATAATCCCTTTCATAATGACTATTAGCTGA4881.7955699462800796No Hit
CATAGACCAGCTTTGCATGAGTGTGGGAAGTAGGGAATGATTACAAGTTC3621.3319596732651409No Hit
CATAGACACCATTGGAGACCTGAGCATCCCTCATTACTCTGGTTCTATGT3521.2951652071528441No Hit
CATAGATGTGAGCACTACTGATAATCCCTGAGACTTGGTCTCATAGATGA3181.1700640223710355No Hit
CATAGATGGTGGGTTCTGGAGAGAGCATCCCTCATTACTCTGGTTCTATG2640.9713739053646331No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTCTCATAGAGGGGAGACAC2490.916182206196188No Hit
CATAGACACACCCAACTCTGCTCAGTCTGCATAGCCACATCTATGTGTAG2480.9125027595849584No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTTACGGTAGCAAAGCT2440.8977849731400398No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTATTAGCGAGACTCTA2100.7726837883582309No Hit
CATAGACCTGACCTCATGATCTGCCTGTGTTCTTTGCATGATCTATGTGT1460.537199205239532No Hit
CATAGAGGCTGGGTGACTTGGTGAATACTTGGTCTCATAGAGGCTGGGTG1280.4709691662373979No Hit
CATAGACCTGACCTCATGATCTGCCTACCTCAGCCTCCCAGATTGCTGGG1250.4599308264037089No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCCGGATTCAAGCAATTCTTCTATGT1240.4562513797924792No Hit
CATAGACTGGCGGTGATTGCTTTCCTCATTACTCTGGTTCTATGTGTAGA1240.4562513797924792No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTATGTCGTCAGTGTAC1210.4452130399587902No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTATTAGGGGAAGTAGG1140.41945691368018245No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTATTAGGAGACTCTAT1090.4010596806240342No Hit
CATAGACCAGCTTTGCATGAGTGTGGCCTGTGTTCTTTGCATGATCTATG1060.3900213407903452No Hit
CATAGAGGGGAGACACTGGCTATAAGAACCATGTCGTCAGTGTCCATCAA1030.3789830009566561No Hit
CATAGAGTTATTCAGAGAGAGGGGAAATGAATGTTGGAGAGGCACATCTA1010.3716241077341968No Hit
CATAGACTTCTGTTTGGTCACATGCTCAGATGTTTCTCTTTGCTCCCTTC970.35690632128927813No Hit
CATAGACACACCCAACTCTACTCAGTCTGCATAGCCACATCTATGTGTAG960.3532268746780484No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTATTAGCGAACTCTAT960.3532268746780484No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGGGGAGACACTGGGGGCACAAA840.30907351534329236No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGACACTGGGGGCACAAAGTTCT810.29803517550960335No Hit
CATAGAGGGGAGACACTGGCTATAAGAACTTGGTCTCATAGAGGGGAGAC790.290676282287144No Hit
CATAGACCAGCTTTGCATGAGTGTGGCATGGAGAAGGGTCTATGTGTAGA780.2869968356759144No Hit
CATAGACCTGACCTCATGATCTGCCTGCCTCAGCCTCCCAAAGTGCTGGG770.2833173890646847No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCAAGCAGATCTGTGTTCTATGTGTA760.279637942453455No Hit
CAGTTTCCCCTCCTTCTATGTGTAGAACCATGTCGTCAGTGTAGATCTCG750.2759584958422253No Hit
CATAGATGTGAGCACTACTGATAATCCCTGATGTGGCATGGAGAAGGGTC750.2759584958422253No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGCAGAGACTTGGTCTCATAGAG740.27227904923099566No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGACTTGGTCTCATAGAGGGGAG710.26124070939730665No Hit
CATAGACTTTTCCTCCAATATAGCTGCACTTAATCTATGTGTAGAAACCT710.26124070939730665No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTGACTTGGCCTCAGTTTCC690.2538818161748473No Hit
CATAGACCTGACCTCATGATCTGCCTGCCTCGGCCTCCCAAAGTGCTGGG680.25020236956361763No Hit
CATAGAGTTATTCAGAGAGAGGGGAAATGATTACAAGTTCTATGGGGAAG660.24284347634115827No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTCTTTTCACAGACCCTACCCCTCA650.23916402972992862No Hit
CATAGATGTTTGAAACTCCTCTACCTAAGATAGACTTGGCCTCAGTTTCC640.23548458311869894No Hit
CATAGACCTGACCTCATGATCTGCCTGTCTCAGCCTCCCAAAGTGCTGGG630.23180513650746928No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTTCTATGTGTAGAACCATGTCGTC580.21340790345132093No Hit
CATAGACCTGACCTCATGATCTGCCTGCCTTGGCCTCCCAAAGTGCTGGG580.21340790345132093No Hit
CATAGATTAGGGGTGACGGACTAGCCATGCTGAAGTCCCATGATCTATGT550.2023695636176319No Hit
CATAGACTGGCGGTGATTGCTTTCCTCCACGGCAAACACTCAAAACAGCC540.19869011700640224No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTATAGACAACACAGGA540.19869011700640224No Hit
CATAGACTTACTGCCCTCACTCCGTCTGCATAGCCACATCTATGTGTAGA530.1950106703951726No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCACGGCAAACACTCAAAACAGCCCT530.1950106703951726No Hit
CATAGACCAGCTTTGCATGAGTGTGGCCTCAGTTTCCCCTCCTTCTATGT520.1913312237839429No Hit
CATAGACCTGACCTCATGATCTGCCTGCCTTGGCCTCCCAAAGTGCTTGG520.1913312237839429No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTGGTAGCAGAGACTTGGTC520.1913312237839429No Hit
CATAGAGGAGCACCCTGAAGTTAAGATTCTTGACAAGAAGATGAGGCATA510.18765177717271322No Hit
CATAGATGTTTGAAACTCCTCTACCTAAGACACTGGGGGCACAAAGTTCT510.18765177717271322No Hit
CATAGACTTACTGCCCTCACTCCGTCTACGGTAGCAAACACTCAAAACAG510.18765177717271322No Hit
CATAGACCTGACCTCATGATCTGCCTGCAGAGACTTGGTCTCATAGATGA490.18029288395025386No Hit
CATAGAGGGGAGACACTGGGGGCACAAAGTTCTATGTGTAGAACCATGTC480.1766134373390242No Hit
CATAGACCAAACACAGAAGACATGGCAAACACTCAAAACAGCCCTCTATG470.17293399072779453No Hit
CATAGATTAGGGGTGACGGACTAGCCATCAATTTAAGGTAGGCACTTCCT460.16925454411656488No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA450.1655750975053352No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA430.15821620428287586No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA430.15821620428287586No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTACGGTAGCAGAGACCTCTCTCAT430.15821620428287586No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGTAGCAGAGACTTGGTCTCATA420.15453675767164618No Hit
CATAGATGATGTGAAAAGGACCCATGGCCTCAGTTTCCCCTCCTTCTATG420.15453675767164618No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTATTAGCGAGACTTTG400.14717786444918685No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGTGGAAAGCTGTCTGTGTAGGTGA390.1434984178379572No Hit
CATAGACTTACTGCCCTCACTCCGTCACCCAGGCTAGAGTGCAGTGGTGT380.1398189712267275No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTATTAGCGAGACCTAG380.1398189712267275No Hit
CATAGACCAAACACAGAAGACATGGCAAACTCTATGAGACTGATGTGGCA380.1398189712267275No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGAGACTTGGTCTCATAGAGGGG380.1398189712267275No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG380.1398189712267275No Hit
CATAGACTGGCGGTGATTGCTTTCCTGGTCTCATAGATTTATCCAGCATG380.1398189712267275No Hit
CATAGAGGTGAGCGGCTGTCTCCAGAAGTCCGCGCAGAGCCTTCAGGTCA370.13613952461549783No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTGACGACATGAATGTT360.13246007800426815No Hit
CATAGACCTCCTTTCCTCCACGGCAAAGCTGCTATGGGATCTTCTATGTG350.12878063139303847No Hit
CATAGACCTGACCTCATGATCTGCCTCAGTTTCCCCTGGCCTCAGTTTCC350.12878063139303847No Hit
CATAGAGGGGAGACACTGGCTATAAGAACAGAGACTTGGTCTCATAGAGG340.12510118478180882No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA340.12510118478180882No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA330.12142173817057914No Hit
CATAGATGATGTGAAAAGGACCCATGGAAAGGCCCACATGACTCATGCTT320.11774229155934947No Hit
CATAGATGTGAGCACTACTGATAATCCCTGAGAGAAAACTACCCCAGGCT320.11774229155934947No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCCATGCTGAAGTCCCATGAT310.1140628449481198No Hit
CATAGACTTTTCCTCCAATATAGCTGCACTAGACTTGGCCTCAGTTTCCC310.1140628449481198No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA310.1140628449481198No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGGGGAGACACTGGCTATAAGAA300.11038339833689013No Hit
CATAGACCAGCTTTGCATGAGTGTGGAACCATGTCAGGCCTGTGTTCTTT300.11038339833689013No Hit
CATAGAGGCTGGGTGACTTGGTGAATAGCCAAAGCCATGCTGAAGTCCCA300.11038339833689013No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTACCGTACCAGTGTAGCAG300.11038339833689013No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA290.10670395172566047No Hit
CATAGACTTACTGCCCTCACTCAGTCTGCATAGCCACATCTATGTGTAGA290.10670395172566047No Hit
CATAGACCTGACCTCATGATCTGCCTTCAGAACGCGGCAAATGGTCTATG280.10302450511443079No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTACACTGATGTGGCATGGA280.10302450511443079No Hit
CATAGATGACCTGTTAATCTGCCCCCGTAGGGCGAAAGTGATCAGAAGCT280.10302450511443079No Hit
CATAGATACGATCATAAGGGTGGGGCTGGGCTCAGTGGCTTATGCCTGTA280.10302450511443079No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)