FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807726

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807726
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences122389
Sequences flagged as poor quality0
Sequence length150
%GC42

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG3471028.360391865282008No Hit
CATAGAGAATTTGCACACCACGGGACATGGATGAAGCTGGATCTATGAGA98528.049743032462068No Hit
CATAGATGTCTCCCAGGCTAGAGTGAGCCCTTGTCCCTTTCTATGAGACC73005.964588320845827No Hit
CATAGACCTTCCTGTTGGCCACACAGAATTAGCGGAGAGTGAGAACTCTA48663.975847502635041No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGCAACAGAACAACAACATCTATG47423.8745312078699885No Hit
CATAGAGGGTGTTTTTCGGTGTTACAACCAATGCTCTTTCATCTATGAGA44933.6710815514466173No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAACAGAACAACAACATCTATG44793.6596426149408856No Hit
CATAGATCATGGGACTTCAGCATGGTGGGTGCCTGATTGTTCTATGAGAC39703.2437555662682103No Hit
CATAGAGGGTGTTTTTCGGTGTCACAACCAATGCTCTTTCATCTATGAGA37893.0958664585869644No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAATCAGGGTTGGTTCTATGAGACC35782.923465344107722No Hit
CATAGAGAATTTGCACACCACGGGACCATGCTCACACCTTGATCTATGAG28172.3016774383318763No Hit
CATAGAACAAGGCCAGAATTACCCTGGGTGAGAAATGATGATGGCTCTAT14941.2206979385402283No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGTGCTCATACAGAATTAGATC10170.8309570304520831No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTCTATGTGTGCTCATACAGAA9730.7950060871483549No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGTGAGCCCTTGTCCCTTTCTATG9020.7369943377264296No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCAGGCCTGAGATTGCTGCTAT8380.6847020565573704No Hit
CATAGAACAAGGCCAGAATTACCCTGGGAGAGGCTGTTTGAGATCTATGA8010.6544705815065079No Hit
CATAGACAGCTGACCAGAAAATGTTTCAGACATGTTTCCTAGTTTCAGTT7360.601361233444182No Hit
CATAGACAGGAGGAGGAAGAAGAGGAAGACAAGAACCCGGGAGGAGGTTG7320.5980929658711159No Hit
CATAGATCTGTGGCTCCCGATAAATGTGATCTGAGCAAGGATAGCCCTCT6840.5588737549943215No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGTGAGAAATGATGATGGCT6160.5033132062521959No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACATGGATGAAGC6130.5008620055723962No Hit
CATAGAGAAGAGAAGGCGACAATGGCTGCTTTTCTCTTCTTGGCATCTAT6130.5008620055723962No Hit
CATAGACAGGAGGAGGAAGAAGAGGAATTCTTGCCAGGGATCTATGAGAC5260.4297771858582062No Hit
CATAGACCACACCCAAACACCACGTACACTGACGACATGGTTCTACACAT5220.42650891828514004No Hit
CATAGACAGCTCACAGACTGCATACTACACTGACGACATGGTGGGTGCCT4680.3823873060487462No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAACAACAACATCTATGAGACCAAG4170.3407168944921521No Hit
CATAGACCCTTAGAGTTTCAGCCTCAGACATGTTTCCTAGTTTCAGTTCT3970.32437555662682105No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTGACGACATGGTGGGTGCCT3760.30721715186822346No Hit
CATAGATTAGTTCTTATTCTTGGTATGGCACTGCTTTTCTCTTCTTGGCA3700.30231475050862416No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTGGGAGAGGCTGTTTGAGATC3340.2729003423510283No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGAGTGAGCCCTTGTCCCTTTCTA3320.2712662085644952No Hit
CATAGATGTCTCCCAGGCTAGAGTGCGCCCTTGTCCCTTTCTATGAGACC3140.25655900448569724No Hit
CATAGAGAATTTGTACACCACGGGACATGGATGAAGCTGGATCTATGAGA2820.2304128639011676No Hit
CATAGACTTGATGCCCAGGAAACCTCACACTGACGACATGGTGGGTGCCT2800.22877873011463448No Hit
CATAGACCCTTAGAGTTTCAGCCTCCAGCAGAATCAGGGTTGGTTCTATG2730.2230592618617686No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCACTGACGACATGGTTCTACACAT2640.21570565982236967No Hit
CATAGAACCCAAAGAGTGGGCAACAGAACAACAACATCTATGAGACCAAG2630.2148885929291031No Hit
CATAGAGGGCCAGAAGTTTGTTTACCTTAGGGACATGGATGAAGCTGGAT2630.2148885929291031No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACCATGCTCACAC2610.21325445914257002No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAACCCAAAGAGTGAGCCCTTGTCC2550.2083520577829707No Hit
CATAGATCTGTGGCTCCCGATAAATGTGCTCATACAGAATTAGATCTAGC2140.17485231515904207No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG2090.1707669806927093No Hit
CATAGAACCCAAAGAGTGAGCCCTTGTCCCTTTCTATGAGACCAAGTCTC2030.16586457933311No Hit
CATAGATGTCTCCTAGGCTAGAGTGAGCCCTTGTCCCTTTCTATGAGACC1880.15360857593411173No Hit
CATAGAGCAAAAGAGAAACATTAAGCCATAGTACACTGGGACATGGATGA1840.1503403083610455No Hit
CATAGACTTGATGCCCAGGAAACCTCCTGCCCCTGCAGGCTGAAAGTGCC1750.14298670632164656No Hit
CATAGACCACACCCAAACACCACGTACACTGAGGAATTCTTGCCAGGGAT1750.14298670632164656No Hit
CATAGACAGGAGGAGGAAGAAGAGGAGGGACATGGATGAAGCTGGATCTA1670.13645017117551414No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCCCAAAGAGTGAGCCCTTGTCCCT1630.13318190360244794No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG1550.12664536845631552No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG1500.12256003398998276No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG1500.12256003398998276No Hit
CATAGATTAGTTCTTATTCTTGGTATGGCACACACTGACACATGGTGGGT1390.11357229816405069No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGTGACGACATGGTGGGTGCCT1380.11275523127078414No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG1360.11112109748425104No Hit
CATAGAGGGTGTTTTTCGGTGTCACAGTCCTGGGAGAGGCTGTTTGAGAT1340.10948696369771793No Hit
CATAGAGAATTTGCACACCACGGGACTTCAGTTGACTATAAGAAACACCT1280.10458456233811862No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAAGAGTGAGCCCTTGTCCCTTTCT1260.10295042855158552No Hit
CATAGAACAAGGCCAGAATTACCCTGCTGCTTTTCTCTTCTTGGCATCTA1240.10131629476505243No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAATTAGCGGAGAGTGAGAACTCTA1240.10131629476505243No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)