FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807732

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807732
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences170506
Sequences flagged as poor quality0
Sequence length150
%GC36

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGACGCGGTATTGTCAGGAGCTAACTGGGATACTGCTCTATGAGACC95975.628540931110929No Hit
CATAGACCTGGTACTTCTCTTCTGGGTCCATTTTTGGTTCTCTTCTATGA85485.013313314487466No Hit
CATAGAACTGAGGCTGGTAGAGGGAGGCGTGGTATGAGGGGAATCTATGA78534.605703025113486No Hit
CATAGATTACTGGGAGACTGGCGCTCACCTCTATGAGACCAAGTCTCTGC68414.012175524614969No Hit
CATAGAGGGAAGAGAAGAGGAGCTGACATCCCAACCACACGTCTATGAGA51173.0010674111174973No Hit
CATAGACAGTCCTGCCGTGTACATGTACAGCCTACATCCCTCATCTATGA45862.6896414202432757No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGGCCCATAATACACTTTTCTAT45192.6503466153683743No Hit
CATAGATGTCCCCATTCATCCTGCAAACAGAATGGGACCCATCTATGAGA45182.649760125743376No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGAGGAACAGGGAGATGTTCTATG41202.4163372549939592No Hit
CATAGAACTTGTGCTTTTGGTGTCACCCGTAATCCCTCCCTTTTCTATGA38692.269128359119327No Hit
CATAGATTACTGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGCT27401.6069815724959826No Hit
CATAGAAAAGTCACCATGCAGCCCTGGCAAAAGGGTAAGAGTTCTATGAG23941.40405616224649No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTAC21331.2509823701218725No Hit
CATAGACGCGGTATTGTCAGGAGCTGACTGGGATACTGCTCTATGAGACC19091.119608694122201No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTGAGGTTCTTCAACACAGCTA18371.0773814411223066No Hit
CATAGAAAAGTCACCATGCAGCCCTGGGCCCATAATACACTTTTCTATGA17561.0298757814974253No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAGCATGAGAAGAATGGCCTCTAT17441.0228379059974428No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTATAGATTATGCTCTCTTCCGCCT14660.8597937902478505No Hit
CATAGAAAAGTCACCATGCAGCCCTGTGATTGTCCTTGCACACCATGGAT12820.7518796992481203No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCGTGTACAGCCTACATCCCTCAT12430.7290066038731775No Hit
CATAGAGCACCCAACTATCCTTCAGCATGAGAAGAATGGCCTCTATGAGA12180.7143443632482142No Hit
CATAGATTACTGGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGC11420.6697711517483256No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTATGGTGAAAAGTAGGGGACAGTT11200.6568683799983578No Hit
CATAGACAGTATGGGGGAAACGGCTCTCTTCCGCCTTTATCCTTCTATGA11180.6556954007483607No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTCCTGGGCCCATAATACACTTTTC11150.6539359318733651No Hit
CATAGAAGGGCAATTATCTCATCCTAGACAGGGCAAGTGTATGGTCAGTT10550.618746554373453No Hit
CATAGATGCACCAGAAGCCACCTACCGTAGGATGACTTATGGAATCTGAA10420.6111221892484722No Hit
CATAGAAGGGCAATTATCTCATCCTAGACTAGAAGGGCAAGTGTATGGTC10310.6046708033734883No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGCAAACAGAATGGGACCCA10220.5993923967485015No Hit
CATAGACCCCCATGCAACCACATCTATGAGACCAGCCTTCTCTGATACCA10130.5941139901235147No Hit
CATAGATTTGGCACTCACATACACGCTCTCTTCCGCCTTTATCCTTCTAT10020.5876626042485308No Hit
CATAGAATCCCTGCCCTTGACCTTGGTGAAAAGTAGGGGACAGTTCTATG9810.5753463221235616No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCCTTGTCCTTGCACACCATGGAT9790.5741733428735646No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCGAACAAGGGCATGGTCAAGTGTC9200.5395704549986511No Hit
CATAGAAAAGTCACCATGCAGCCCTGGTGGTGCTGGAACTAGTTCTATGA8920.5231487454986922No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTACCAAGTATATGACACATTA8850.5190433181237024No Hit
CATAGATCATGAATGACTCCCACTCTGGTGGTGCTGGAACTAGTTCTATG8650.5073135256237318No Hit
CATAGACCCCCATGCAACCACATCTATACAATGGGCACACTTAACACCTC8590.5037945878737405No Hit
CATAGAATTCCCCAATGTCCTGTGCAAACAGAATGGGACCCATCTATGAG8530.5002756501237493No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCCACAGCCCAGTTTTCCTTCTCTA8050.4721241481238197No Hit
CATAGATGCACCAGAAGCCACCTACCCCTTTACCTACCTTCTCAGCTCTA7890.4627403141238431No Hit
CATAGAATCACTTGAGTTTGTAAAAGCAGAGGATGACTTATGGAATCTGA7830.45922137637385196No Hit
CATAGAGTCATTCCAAACTGTGCACTTGTCATTCCAACTCTATAGATTAT7590.44514562537388713No Hit
CATAGAATCCCTGCCCTTGACCTTGGGAGGAACAGGGAGATGTTCTATGA7260.4257914677489355No Hit
CATAGAATTGCCTACTTTGGGACCCATGCAAACAGAATGGGACCCATCTA7240.42461848849893846No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTACTTAGGAGTTCTGGCCCCT7120.41758061299895605No Hit
CATAGACGCGGTATTGTCAGGAGCTGACATCCCAACCACACGTCTATGAG7070.4146481648739634No Hit
CATAGACTTTCTGAAATTGTTTGCTGCTTTACACTGATCTAGCTTCGGAA6990.4099562478739751No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGTAAGAGTTCTATGA6980.4093697582489766No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGCAAGTGTATGGTCA6690.39236155912401904No Hit
CATAGAATCCCTGCCCTTGTCCTTGCACACCATGGATCTATGAGACCAAG6670.391188579874022No Hit
CATAGACCCACTTACACACACAGGTTTGGGGGAAGAGAAACAGAATCTAT6640.3894291109990264No Hit
CATAGATTGCCTCATTGTGCCAGACAAGCACATTATTATTGGTTGGTTCT6630.38884262137402786No Hit
CATAGATTTGGCACTCACATACACGCTTTTGGGGGAAGAGAAACAGAATC6600.3870831524990323No Hit
CATAGAATCCCTGCCCTTGACCTTGGGGGAAGAGAAACAGAATCTATGAG6360.37300740149906747No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGTGGTGCTGGAACTAGTTCTATG6360.37300740149906747No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG6350.37242091187406895No Hit
CATAGAATTCCCCAATGTCCTGTGCACACCATGGATCTATGAGACCAAGT6340.3718344222490704No Hit
CATAGATGCACCAGAAGCCACCTACCGTATGATCTAGCTTCGGAATGTTT6290.36890197412407777No Hit
CATAGAATCACTTGAGTTTGTAAAAGCAGACAATGGGCACACTTAACACC6180.3624505882490939No Hit
CATAGATGCACCAGAAGCCACCTACCGTAGCTCTCTTCCGCCTTTATCCT6120.3589316504991027No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAAGTATATGACACATTACACCAG6060.35541271274911146No Hit
CATAGAATTGCCTACTTTGGGACCCAGCATGAGAAGAATGGCCTCTATGA5990.35130728537412176No Hit
CATAGATTTGGCACTCACATACACGCTGACATCCCAACCACACGTCTATG5990.35130728537412176No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGGATACTGCTCTATGAGACCCAC5980.35072079574912324No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTGCAAACA5920.347201857999132No Hit
CATAGATTACTGGGAGACTGGCGCTCTCTTCCGCCTTTATCCTTCTATGA5920.347201857999132No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTGCAAACAGA5910.3466153683741334No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCAGTGTGAACAAGGGCATGGTCAA5910.3466153683741334No Hit
CATAGATGTGTGAGAGAGGGAGAGACAGCCTTCTCTGATACCATCCCTCT5890.3454423891241364No Hit
CATAGAGGCAAGCTAACTCTGAGATCCACAGCCCAGTTTTCCTTCTCTAT5700.33429908624916427No Hit
CATAGAACCCTGCTTCCTAAATCAACAATGGGCACACTTAACACCTCTAT5340.313185459749217No Hit
CATAGATCATGGGACTTCAGCATGGCAAAAGGGCAAGTGTATGGTCAGTT5320.31201248049922No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCAGCATGAGAAGAATGGCCTCT5200.30497460499923756No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCAAA5120.3002826879992493No Hit
CATAGAACTTGTGCTTTTGGTGTCACAAGCACATTATTATTGGTTGGTTC5100.29910970874925225No Hit
CATAGACAGAACACCACACCCCTGTCACACTGACGACAATGGGCACACTT4910.2879664058742801No Hit
CATAGATCATGAATGACTCCCACTCTGTAGATTATGCTCTCTTCCGCCTT4730.2774095926243065No Hit
CATAGACAGAACACCACACCCCTGTCTATGAGACTTAGGAGTTCTGGCCC4720.27682310299930796No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCCTGGGCCCATAATACACTTTTCTA4460.2615743727493461No Hit
CATAGACAGAACACCACACCCCTGTCCTTGTCCTTGCACACCATGGATCT4310.25277702837436805No Hit
CATAGAACTGAGGCTGGTAGAGGGAGCCTTGGAGGCCTAGCCTGGCAGCT4250.24925809062437687No Hit
CATAGAAAAGTCACCATGCAGCCCTGAGCTGGGAGGAACAGGGAGATGTT4250.24925809062437687No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTAGAACAAGGGCATGGTCAAGTG4040.23694180849940763No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGACCAAGGAACAAGGGCA3980.23342287074941648No Hit
CATAGACCCCCATGCAACCACATCTACACTGACGACATGGTTCTACACAT3870.22697148487443256No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTAGAGACCTGGGCCCATAATACAC3770.22110658862444724No Hit
CATAGAATTGCCTACTTTGGGACCCATCTGCAAACAGAATGGGACCCATC3760.22052009899944872No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCAACAAGGGCATGGTCAAGTGTCT3710.217587650874456No Hit
CATAGACAGTCCTGCCGTGTACATGTACAAACCAAACAATAGCCAGTCTA3660.21465520274946337No Hit
CATAGAACTTGTGCTTTTGGTGTCACTTGATCATCCATTGTCTGCTCTAT3650.21406871312446485No Hit
CATAGAATTGCCTACTTTGGGACCCACTTTGTTCCCTGGCTTCTCTATGA3440.2017524309994956No Hit
CATAGACAGAACACCACACCCCTGTCCTTGCACACCATGGATCTATGAGA3320.1947145554995132No Hit
CATAGATGCACCAGAAGCCACCTACCCCCTTTACCTACCTTCTCAGCTCT3180.18650370074953374No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAACAAGGGCATGGTCAAGT3170.1859172111245352No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAGCTCTCTTCCGCCTTTATC3080.18063880449954842No Hit
CATAGACAGAACACCACACCCCTGTCTATGAGACCAAGTCTCTGCCTTAG3080.18063880449954842No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCTCTCTTCCGCCTTTATCCTTCTAT3050.1788793356245528No Hit
CATAGAGGCAAGCTAACTCTGAGATCCATCAGAGCATCACCCCTTCTATG3030.17770635637455573No Hit
CATAGACAGTCCTGCCGTGTACATGTATAGAGAAGGAAAATGTCAGTGGG2890.16949550162457627No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGAACAAGGGCATGGTCAA2890.16949550162457627No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTGC2850.16714954312458213No Hit
CATAGAAAAGTCACCATGCAGCCCTGAGGTTCTTCAACACAGCTATTCTA2850.16714954312458213No Hit
CATAGAGTCATTCCAAACTGTGCACTTGTCCTTGCACACCATGGATCTAT2830.16597656387458506No Hit
CATAGATGCACCAGAAGCCACCTACCTGGGCCCATAATACACTTTTCTAT2830.16597656387458506No Hit
CATAGACTTTCTGAAATTGTTTGCTGCTTTGGGGGAAGAGAAACAGAATC2720.15952517799960117No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGACCAAGTCTCTGCTACC2720.15952517799960117No Hit
CATAGAATCCCTGCCCTTGACCTTGCACACCATGGATCTATGAGACCAAG2710.15893868837460265No Hit
CATAGACCCCCATGCAACCACATCTATTTTGGGGGAAGAGAAACAGAATC2700.15835219874960413No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTACACTGCAAACAGAATGGGA2590.15190081287462026No Hit
CATAGAGGTTCTTTGTAGACTTACCTGGCAAAAGGGTAAGAGTTCTATGA2500.14662240624963344No Hit
CATAGATGGCATGTCACTTCCTCAGAGCATCACCCCTTCATTTTGCTGGA2460.14427644774963932No Hit
CATAGAATTCCCCAATGTCCTGTGCATTGTCCTTGCACACCATGGATCTA2450.14368995812464078No Hit
CATAGAACCCTGCTTCCTAAATCAACAAGGGCATGGTCAAGTGTCTATGA2390.14017102037464957No Hit
CATAGAGCATCCTCGTAATAGCAAACATTTTCAGAAAGTCTATGTGCCCC2390.14017102037464957No Hit
CATAGAATTCCCCAATGTCCTTGCACACCATGGATCTATGAGACCAAGTC2320.13606559299965984No Hit
CATAGAAAAGTCACCATGCAGCCCTGGAATTCCCCAAGTATATGACACAT2300.13489261374966277No Hit
CATAGAATTGCCTACTTTGGGACCCACCCCTTTACCTACCTTCTCAGCTC2290.13430612412466425No Hit
CATAGAATTGCCTACTTTGGGACCCAGTCTCAGGATGACTTATGGAATCT2270.13313314487466715No Hit
CATAGAACTGAGGCTGGTAGAGGGAGATGTCCCCTTTACCTACCTTCTCA2270.13313314487466715No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTACTGGTGGTGCTGGAACTAG2260.13254665524966863No Hit
CATAGAACCCTGCTTCCTAAATCAACAGATCTGGGAGGAACAGGGAGATG2190.1284412278746789No Hit
CATAGATCATGGGACTTCAGCATGGCTCTCTTCCGCCTTTATCCTTCTAT1960.11495196649971262No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGCCCCTTTACCTACCTTCTC1900.11143302874972141No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGGAGGAACAGGGAGATGTTCTAT1830.10732760137473168No Hit
CATAGACAGTCCTGCCGTGTACATGTCCTGCCGTGTACAGCCTACATCCC1830.10732760137473168No Hit
CATAGACAGTCCTGCCGTGTACATGTGCCCTGTGATTGTCCTGGTCTATG1830.10732760137473168No Hit
CATAGAGCAGTGCAGCAGAAGATAGCGCCATTGTACTCCAGTCTCGGCAA1760.10322217399974196No Hit
CATAGAATCCCTGCCCTTGACCTTGGTCTGTCATAAAACAATGGGCACAC1710.10028972587474928No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)