FastQCFastQC Report
Wed 8 May 2024
EGAF00005807733

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807733
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences170506
Total Bases25.5 Mbp
Sequences flagged as poor quality0
Sequence length150
%GC35

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCAGTATCCCAGTTAGCTCCTGACAATACCGCGTCTATGTGTAG97735.73176310511067No Hit
CATAGAAGAGAACCAAAAATGGACCCAGAAGAGAAGTACCAGGTCTATGT86115.050262160862375No Hit
CATAGATTCCCCTCATACCACGCCTCCCTCTACCAGCCTCAGTTCTATGT78204.586348867488534No Hit
CATAGAGGTGAGCGCCAGTCTCCCAGTAATCTATGTGTAGAACCATGTCG66223.8837342967402906No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTCTTCTCTTCCCTCTATGTGT49912.927169718367682No Hit
CATAGATGAGGGATGTAGGCTGTACATGTACACGGCAGGACTGTCTATGT45412.663249387118342No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGTTGACAAACGACAGCTTCTAT44692.6210221341184474No Hit
CATAGATGGGTCCCATTCTGTTTGCAGGATGAATGGGGACATCTATGTGT44252.595216590618512No Hit
CATAGAACATCTCCCTGTTCCTCCCACCTAAACTCCTGAGATCCTCTATG41302.4222021512439444No Hit
CATAGAAAAGGGAGGGATTACGGGTGACACCAAAAGCACAAGTTCTATGT38752.272647296869318No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTAATCTATGTGTAGAACCATGTCGT30671.7987636798705031No Hit
CATAGAACTCTTACCCTTTTGCCAGGGCTGCATGGTGACTTTTCTATGTG23551.381183066871547No Hit
CATAGAGCAGTATCCCAGTCAGCTCCTGACAATACCGCGTCTATGTGTAG19161.1237141214971906No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAAGAAAGAAAACCCACAAAAGAC18671.0949761298722624No Hit
CATAGAAAAGTGTATTATGGGCCCAGGGCTGCATGGTGACTTTTCTATGT17351.0175594993724562No Hit
CATAGAGGCCATTCTTCTCATGCTGGATCTCAGAGTTAGCTTGCCTCTAT17111.0034837483724912No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTATAGGAGTTGACAAAC14200.832815267497918No Hit
CATAGATCCATGGTGTGCAAGGACAATCACAGGGCTGCATGGTGACTTTT12610.7395634171231511No Hit
CATAGAGGTGAGCGGCTGTCTCCCAGTAATCTATGTGTAGAACCATGTCG12330.7231417076231922No Hit
CATAGATGAGGGATGTAGGCTGTACACGGCAGGGCTGCATGGTGACTTTT12310.7219687283731951No Hit
CATAGAGGCCATTCTTCTCATGCTGAAGGATAGTTGGGTGCTCTATGTGT12010.7043740396232391No Hit
CATAGATGGGTCCCAAAGTAGGCAATTCTATGTGTAGAACCATGTCGTCA11470.6727035998733182No Hit
CATAGAACTGTCCCCTACTTTTCACCATAGAACTTTCCCACCGCCCTTTT11450.6715306206233211No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGGAGTTGACAAACGACAGCTTC11160.6545224214983637No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCCGTTTCCCCCATACTGTCTATGT11120.6521764629983695No Hit
CATAGAACTGACCATACACTTGCCCTGTCTAGGATGAGATAATTGCCCTT10560.6193330439984517No Hit
CATAGAGCTTCAGATTCCATAAGTCATCCTACGGTAGGTGGCTTCTGGTG10400.6099492099984751No Hit
CATAGAACTGACCATACACTTGCCCTTCTAGTCTAGGATGAGATAATTGC10350.6070167618734824No Hit
CATAGAGGGATGGTATCAGAGAAGGCTGGTCTCATAGATGTGGTTGCATG9890.5800382391235499No Hit
CATAGATGGGTCCCATTCTGTTTGCATAGATGGGTCCCAAAGTAGGCAAT9880.5794517494985514No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCGTGTATGTGAGTGCCAAATCTAT9860.5782787702485543No Hit
CATAGAACTGTCCCCTACTTTTCACCAAGGTCAAGGGCAGGGATTCTATG9720.5700679154985748No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGCTGCATGGTGACTTTT9720.5700679154985748No Hit
CATAGACACTTGACCATGCCCTTGTTCGACACTTGAAAGCTCCCTGGATC9140.5360515172486598No Hit
CATAGAACTAGTTCCAGCACCACCAGGGCTGCATGGTGACTTTTCTATGT9080.5325325794986686No Hit
CATAGAACTAGTTCCAGCACCACCAGAGTGGGAGTCATTCATGATCTATG8650.5073135256237318No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTACGGTTGCAGGATGAATG8530.5002756501237493No Hit
CATAGATGGGTCCCATTCTGTTTGCACAGGACATTGGGGAATTCTATGTG8380.4914783057487713No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTATAGATGTGGTTGCATGGGGGTC8210.4815079821237962No Hit
CATAGAGAAGGAAAACTGGGCTGTGGACACTTGAAAGCTCCCTGGATCTA8070.47329712737381674No Hit
CATAGAGCTGAGAAGGTAGGTAAAGGGGTAGGTGGCTTCTGGTGCATCTA7740.4539429697488651No Hit
CATAGAGCTTCAGATTCCATAAGTCATCCTCTGCTTTTACAAACTCAAGT7740.4539429697488651No Hit
CATAGAAGAGAGCATAATCTATAGAGTTGGAATGACAAGTGCACAGTTTG7350.4310698743739223No Hit
CATAGAACATCTCCCTGTTCCTCCCAAGGTCAAGGGCAGGGATTCTATGT7160.41992657149895024No Hit
CATAGATGGGTCCCATTCTGTTTGCATGGGTCCCAAAGTAGGCAATTCTA7110.4169941233739575No Hit
CATAGATGAAAACATTCCGAAGCTAGATCAGTGTAAAGCAGCAAACAATT7080.4152346544989619No Hit
CATAGACAGGGGCCAGAACTCCTAAGTACGGTTGCAGGATGAATGGGGAC7060.41406167524896487No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTGACAATACCGCGTCTATGTG7060.41406167524896487No Hit
CATAGAACTCTTACCCTTTTGCCAAGTAAGTCTACAAAGAACCTCTATGT6920.40585082049898535No Hit
CATAGAACCAACCAATAATAATGTGCTTGTCTGGCACAATGAGGCAATCT6810.39939943462400146No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCAAGTAAGTCTACAAAGAA6730.39470751762401324No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGATTCTATGTGTAGAAC6680.3917750694990205No Hit
CATAGATTCTGTTTCTCTTCCCCCAAAAGCGTGTATGTGAGTGCCAAATC6560.38473719399903816No Hit
CATAGATTCTGTTTCTCTTCCCCCAAACCTGTGTGTGTAAGTGGGTCTAT6530.38297772512404255No Hit
CATAGAACTAGTTCCAGCACCACCAGTTAGGCTACTTGGGGGTCTCTATG6250.36655601562408363No Hit
CATAGATGAAAACATTCCGAAGCTAGATCATACGGTAGGTGGCTTCTGGT6240.36596952599908505No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCTGCTTTTACAAACTCAAGTGAT6200.3636235674990909No Hit
CATAGATTCTGTTTCTCTTCCCCCAAGGTCAAGGGCAGGGATTCTATGTG6140.36010462974909974No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCGCCAGTCTCCCAGTAATCTATGT6110.3583451608741041No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCTACGGTAGGTGGCTTCTGGTGCA6020.3530667542491173No Hit
CATAGAGGGATGGTATCAGAGAAGGCTGTCTCTCCCTCTCTCACACATCT5980.35072079574912324No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGATCTCAGAGTTAGCTTGCC5950.3489613268741276No Hit
CATAGATGGGTCCCATTCTGTTTGCAGACTTGGTCTCATAGATGGGTCCC5940.34837483724912904No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA5930.3477883476241305No Hit
CATAGAGGCCATTCTTCTCATGCTGGGTCCCAAAGTAGGCAATTCTATGT5930.3477883476241305No Hit
CATAGACACTTGACCATGCCCTTGTTCACACTGACACTTGAAAGCTCCCT5920.347201857999132No Hit
CATAGACGTGTGGTTGGGATGTCAGCGTGTATGTGAGTGCCAAATCTATG5870.34426940987413934No Hit
CATAGATGGGTCCCATTCTGTTTGCACTTGGTCTCATAGATGGGTCCCAA5860.3436829202491408No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTGGGTCTCATAGAGCAGTATCCCA5840.3425099409991437No Hit
CATAGAGAAGGAAAACTGGGCTGTGGATCTCAGAGTTAGCTTGCCTCTAT5710.3348855758741628No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCATGCTGAAGTCCCATGAT5280.30966652199922584No Hit
CATAGAACCAACCAATAATAATGTGCTTGTGACACCAAAAGCACAAGTTC5200.30497460499923756No Hit
CATAGAGGCCATTCTTCTCATGCTGGGTAGAATCTTGAACTCAGGAGTCT5190.30438811537423904No Hit
CATAGATGGGTCCCATTCTGTTTGCAGAGACTTGGTCTCATAGATGGGTC5110.29969619837425077No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTTGATTTAGGAAGCAGGGTTCTAT5010.2938313021242654No Hit
CATAGACAGGGGCCAGAACTCCTAAGTCTCATAGACAGGGGTGTGGTGTT4690.27506363412431234No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCGTCAGTGTGACAGGGGTGTGGT4640.2721311859993197No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTACAGAGTGGGAGTCAT4550.2668527793743329No Hit
CATAGAAAAGTGTATTATGGGCCCAGGCAGCTCCTCTTCTCTTCCCTCTA4480.2627473519993431No Hit
CATAGATCCATGGTGTGCAAGGACAAGGACAGGGGTGTGGTGTTCTGTCT4320.2533635179993666No Hit
CATAGAACTAGTTCCAGCACCACCAGCTGCCAGGCTAGGCCTCCAAGGCT4300.25219053874936953No Hit
CATAGAACATCTCCCTGTTCCTCCCAGCTCAGGGCTGCATGGTGACTTTT4220.24749862174938125No Hit
CATAGACACTTGACCATGCCCTTGTTCTAGACACTTGAAAGCTCCCTGGA4100.24046074624939884No Hit
CATAGACACTTGACCATGCCCTTGTTCCTTGGTCTCATAGACACTTGAAA3940.23107691224942228No Hit
CATAGAAAAGTGTATTATGGGCCCAGGTCTCTAGGAGTTGACAAACGACA3720.21817414049945458No Hit
CATAGATGGGTCCCATTCTGTTTGCAGATGGGTCCCAAAGTAGGCAATTC3710.217587650874456No Hit
CATAGACACTTGACCATGCCCTTGTTGACACTTGAAAGCTCCCTGGATCT3700.21700116124945748No Hit
CATAGAGCAGACAATGGATGATCAAGTGACACCAAAAGCACAAGTTCTAT3600.21113626499947216No Hit
CATAGATCCATGGTGTGCACAGGACATTGGGGAATTCTATGTGTAGAACC3570.20937679612447654No Hit
CATAGACTGGCTATTGTTTGGTTTGTACATGTACACGGCAGGACTGTCTA3550.2082038168744795No Hit
CATAGAGAAGCCAGGGAACAAAGTGGGTCCCAAAGTAGGCAATTCTATGT3410.1999929621245No Hit
CATAGATCCATGGTGTGCAAGGACAGGGGTGTGGTGTTCTGTCTATGTGT3320.1947145554995132No Hit
CATAGAGCTGAGAAGGTAGGTAAAGGGGGTAGGTGGCTTCTGGTGCATCT3140.18415774224953962No Hit
CATAGACAGGGGCCAGAACTCCTAAGGCAGAGACTTGGTCTCATAGACAG3140.18415774224953962No Hit
CATAGACACTTGACCATGCCCTTGTTCATAGACACTTGAAAGCTCCCTGG3070.18005231487454987No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCTACGGTTGCAGGATGAATGGGGA3020.17711986674955718No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCAGCTCCTCTTCTCTTCCCTCTAT2970.17418741862456452No Hit
CATAGAAGGGGTGATGCTCTGATGGATCTCAGAGTTAGCTTGCCTCTATG2970.17418741862456452No Hit
CATAGACACTTGACCATGCCCTTGTTCTCATAGACACTTGAAAGCTCCCT2940.17242794974956893No Hit
CATAGATTCCCCTCATACCACGCCTCAGTTCTATGTGTAGAACCATGTCG2940.17242794974956893No Hit
CATAGATGGCCCACTGACATTTTCCTTCTCTATACATGTACACGGCAGGA2890.16949550162457627No Hit
CATAGAAAAGTGTATTATGGGCCCAGGTAGGTGGCTTCTGGTGCATCTAT2850.16714954312458213No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAGGGCTGCATGGTGACTTTTCTA2840.1665630534995836No Hit
CATAGATCCATGGTGTGCAAGGACAAGTGCACAGTTTGGAATGACTCTAT2830.16597656387458506No Hit
CATAGATTCTGTTTCTCTTCCCCCAAAGCAGCAAACAATTTCAGAAAGTC2730.16011166762459972No Hit
CATAGATGGGTCCCATTCTGTTTGCAGCAGAGACTTGGTCTCATAGATGG2710.15893868837460265No Hit
CATAGATTCTGTTTCTCTTCCCCCAAAATAGATGTGGTTGCATGGGGGTC2700.15835219874960413No Hit
CATAGATCCATGGTGTGCAAGGTCAAGGGCAGGGATTCTATGTGTAGAAC2680.15717921949960706No Hit
CATAGATGGGTCCCATTCTGTTTGCAGTGTAAGAAAGAAAACCCACAAAA2600.15248730249961878No Hit
CATAGAACTCTTACCCTTTTGCCAGGTAAGTCTACAAAGAACCTCTATGT2510.14720889587463198No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGATGCTCTGAGGAAGTGACATGC2480.14544942699963637No Hit
CATAGATCCATGGTGTGCAAGGACATTGGGGAATTCTATGTGTAGAACCA2430.1425169788746437No Hit
CATAGATCCATGGTGTGCAAGGACAATGCACAGGACATTGGGGAATTCTA2430.1425169788746437No Hit
CATAGAGTTCCAGCAAAATGAAGGGGCACATAGACTTTCTGAAAATGTTT2370.1389980411246525No Hit
CATAGACACTTGACCATGCCCTTGTTGATTTAGGAAGCAGGGTTCTATGT2350.13782506187465543No Hit
CATAGAGCTGAGAAGGTAGGTAAAGGGGTGGGTCCCAAAGTAGGCAATTC2270.13313314487466715No Hit
CATAGAACTAGTTCCAGCACCACCAGTACGGTTGCAGGATGAATGGGGAC2240.13137367599967156No Hit
CATAGAGCTTCAGATTCCATAAGTCATCCTGAGACTGGGTCCCAAAGTAG2230.13078718637467304No Hit
CATAGAGCTGAGAAGGTAGGTAAAGGGGACATCTCCCTCTACCAGCCTCA2210.12961420712467597No Hit
CATAGAACATCTCCCTGTTCCTCCCAGATCTGTTGATTTAGGAAGCAGGG2200.12902771749967742No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGGGAATTCCAGGGCTGCATG2180.12785473824968036No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCCATGCTGAAGTCCCATGATCTAT1970.11553845612471114No Hit
CATAGAGCTGAGAAGGTAGGTAAAGGGGCATAGACACTTGAAAGCTCCCT1850.10850058062472874No Hit
CATAGAACATCTCCCTGTTCCTCCCAGTTAGGCTACTTGGGGGTCTCTAT1780.10439515324973901No Hit
CATAGACCAGGACAATCACAGGGCACATGTACACGGCAGGACTGTCTATG1780.10439515324973901No Hit
CATAGATGAGGGATGTAGGCTGTACACGGCAGGACATGTACACGGCAGGA1760.10322217399974196No Hit
CATAGACTTGTTGCCGAGACTGGAGTACAATGGCGCTATCTTCTGCTGCA1740.10204919474974486No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)