FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807736

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807736
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences53686
Sequences flagged as poor quality0
Sequence length150
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG1095520.4056923592743No Hit
CATAGAGAGATTTTGGGCTGAGACGATAATGCCGCATATCTACAACTATC624411.630592705733338No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAACAA28545.31609730656037No Hit
CATAGACACCATGCCTGGCTAATTTTTTGCGTTTTTAGTAGAGATGGGGT17213.20567745781023No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGATAGGGTT15982.9765674477517416No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACACTCA12732.371195469954923No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTACACATGGCTATGCAATCTAT10631.980032038147748No Hit
CATAGACCTGGGCTTAGGGGCTACACATGGCTATGCAATCTATGAGACCA10571.9688559400961143No Hit
CATAGACCTGGGCTTAGGGGCTATACATGGCTATGCAATCTATGAGACCA9811.827292031442089No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGTGGTGTGGTG9401.7509220280892597No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTCAATTCCCAGACATAAGCCAGT8831.6447490965987406No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAATCA6631.2349588347055098No Hit
CATAGACAGGGAGGCGTATAAGTGATGACTGATACAGGAAGGCCTTTCTA5531.0300637037588944No Hit
CATAGATGCCCTTTTTGTGTACTTCCACACTGACGACATGGTTCTACACA5130.9555563834146704No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGCAAGCAATGACAG4950.9220280892597698No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGGAAAGGATTCTAT4830.8996758931565028No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAACCTGTCTCTACT3430.6389002719517193No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTGGTGCACATGCC3350.6239988078828745No Hit
CATAGACCTGGGCTTAGGGGCTATACATTCAGGAGAAGTGGCATCTATGT3280.6109600268226353No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTTGTAGAGACAGAGTT3110.5792944156763402No Hit
CATAGACACCATGCCTGGCTAATTTTTTGTATTAATCCCAGCTACTCAGG3030.5643929516074955No Hit
CATAGATGTCCATCATGTGGAAGCTGGAGAGTCACTTCTTTTGATAATTC2850.5308646574525947No Hit
CATAGATGCCCTTTTTGTGTACTTCCACTGACGACATGGTTCTACACATA2720.506649778340722No Hit
CATAGACACCATGCCTGGCTAATTTTTTGTATTTTTAGTAGAGATGGGGT2630.48988563126327156No Hit
CATAGACCTTTGGGTTCATATCATCTGGACACTGACGACATGGTTCTACA2610.48616026524606043No Hit
CATAGACACCATGCCTGGCTAATTTTAAAATTAGTACCTATAATCTCAGC2610.48616026524606043No Hit
CATAGACCTGGGCTTAGGGGCTATACGTGAATGTGGATCAGAACTTCTAT2600.4842975822374548No Hit
CATAGAGCCAAGGAAAGTTGAATGGACACAGTTTCTAAGCGCTGGCATTT2520.4693961181686101No Hit
CATAGAGCAACAGGGACTCTCATTCAAAATGGTCAAACAGGAGGTCTATG2420.45076928808255406No Hit
CATAGACACCATGCCTGGCTAATTTTTTTGTGTTTTTGGTAGAGATGGGG2280.4246917259620757No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGAACCTGCG2230.4153783109190478No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCATATGTCTTTATCAGCAGCATT2200.40979026189323103No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGTATCCCCAGAAATG2130.3967514808329919No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGACAGCGTT1970.3669485526953023No Hit
CATAGACACCATGCCTGGCTAATTTTTAAAAAGTAGCTGGGCATGGTGGC1860.3464590396006408No Hit
CATAGATGAAAGCCTGTTGAATTTATGATCTATCCAGGAATTTTATTTTA1780.331557575531796No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTGTTATTCAAAGGTTTTCTGC1740.3241068434973736No Hit
CATAGACCTTTGGGTTCATATCATCTGGTTACCATTTTCCCCCAAGTCAT1690.31479342845434566No Hit
CATAGACAGGGAGGCGTATAAGTGATGTGCTTCTTTCAAAAGTCTGGTCT1660.3092053794285289No Hit
CATAGATGCCCTTTTTGTGTACTTCCAACACTGACTGATACAGGAAGGCC1650.30734269641992323No Hit
CATAGACACCATGCCTGGCTAATTTTTAAATATTTTGTAGAGACCGGGTT1610.29989196438550086No Hit
CATAGAAACCCCAAAGGCTATGTTCAAAATGGTCAAACAGGAGGTCTATG1580.2943039153596841No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGCGTATTCTAAATATACAATCA1430.26636367023060015No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTATCCCCAGAAATGTTAGCATGT1410.26263830421338896No Hit
CATAGATGTATACAAGCTGTCACAGACAACAAGCAATGGGGAAAGGATTC1400.26077562120478337No Hit
CATAGATCCCATCCAATAATAATGAACAAGCAATGGGGAAAGGATTCTAT1380.2570502551875722No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTATCCCCAGAAATGTTAG1300.2421487911187274No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG1300.2421487911187274No Hit
CATAGACCTTTGGGTTCATATCATCTGGAGACAGCCGCTCACCTCTATGA1170.2179339120068547No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCATCTCTA1160.21607122899824907No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATGTCTATGAGAC1160.21607122899824907No Hit
CATAGACCTTTGGGTTCATATCATCTGGCTACACATGGCTATGCAATCTA1120.20862049696382673No Hit
CATAGATGTCCATCATGTGGAAGCTGATTAGAAATGCTGACTCCCAGGCC1120.20862049696382673No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTTCCTTCTGCTGGCTATTCTATG1080.20116976492940433No Hit
CATAGACACCATGCCTGGCTAATTTTGTATTTTTAGTAGAGACAGGGTTT1050.1955817159035875No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGACAGGGTT1020.18999366687777072No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCTGTCTCTA1000.18626830086055957No Hit
CATAGATCATGGGACTTCAGCATGGCCTACACAAAGTCACGAAAGTGGGT980.18254293484334835No Hit
CATAGATCATGGGACTTCAGCATGGCTATTCTATGAGACCTGCTTCCTTC970.18068025183474276No Hit
CATAGATGCCCTTTTTGTGTACTTCCAGATGCCCTTTTTGTGTGCTTCTT960.17881756882613717No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCGTCTCTA910.1695041537831092No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATATCCCCAGAAA890.165778787765898No Hit
CATAGATCATGGGACTTCAGCATGGCTACACATGGCTATGCAATCTATGA830.15460268971426444No Hit
CATAGAGCTGGCTTCCTAACTTCCAACACTGACGACATGGTTCTACACAT760.14156390865402527No Hit
CATAGAACTTCACAAGGGCTTTAGGGCTACACATGGCTATGCAATCTATG730.13597585962820846No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG700.13038781060239168No Hit
CATAGATGCCCTTTTTGTGTACTTCCAGATTGGCTTCCCTATGCCCACCC690.1285251275937861No Hit
CATAGATGCCCTTTTTGTGTACTTCCATGTCACAAGCAATGGGGAAAGGA690.1285251275937861No Hit
CATAGACACCATGCCTGGCTAATTTTTTTGTGTTTTCGGTAGAGATGGGG680.1266624445851805No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAATCCCGTACACA670.1247997615765749No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTCTCTAAATATACACTCA660.1229370785679693No Hit
CATAGATGCCCTTTTTGTGTACTTCCACACTGACTGATACAGGAAGGCCT650.1210743955593637No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCGAAACCCCATCTCTA650.1210743955593637No Hit
CATAGACAATTAAATTTTCTTAAGGGGTTGCACAGATCATTTAAGCTCAA650.1210743955593637No Hit
CATAGATCATGGGACTTCAGCATGGCAAAACCCCGTCTCTACTAAAAATA630.11734902954215252No Hit
CATAGATCATGGGACTTCAGCATGGCGAAACATCTCTACTAAAAATACAA630.11734902954215252No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCATACACTGATCTATCCAGGAAT630.11734902954215252No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC620.11548634653354693No Hit
CATAGATTGGAACTTTGCCAGCCTTATCCCCAGAAATGTTAGCATGTCTA610.11362366352494133No Hit
CATAGATTGGAACTTTGCCAGCCTTATTGACCCAGGTCCCCAAATCTATG600.11176098051633573No Hit
CATAGATCCCATCCAATAATAATGAGCAATGGGCAAGCAATGACAGTCTA580.10803561449912454No Hit
CATAGATGCCCTTTTTGTGTACTTCCACATGGTTCTACACATAGATGCCC580.10803561449912454No Hit
CATAGAGGATCCCATCTGAGTTGGTCTCATAGAATCCTTTCCCTCACTCT560.10431024848191336No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCAGCG550.10244756547330776No Hit
CATAGATCATGGGACTTCAGCATGGCCAAGATGGTGAAACCCTGTCTCTA540.10058488246470217No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)