FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807738

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807738
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences155867
Sequences flagged as poor quality0
Sequence length150
%GC40

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG3923525.172101856069595No Hit
CATAGAGAATTTGCACACCACGGGACATGGATGAAGCTGGATCTATGAGA108216.9424573514598995No Hit
CATAGATGTCTCCCAGGCTAGAGTGAGCCCTTGTCCCTTTCTATGAGACC78085.009399038924211No Hit
CATAGACCTTCCTGTTGGCCACACAGAATTAGCGGAGAGTGAGAACTCTA50953.2688125132324353No Hit
CATAGAGGGTGTTTTTCGGTGTTACAACCAATGCTCTTTCATCTATGAGA50603.246357471433979No Hit
CATAGAGCAAAAGAGAAACATTAAGCCATAGTACACTGACTTCAGTTGAC50563.243791180942727No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGCAACAGAACAACAACATCTATG50183.2194114212758316No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAACAGAACAACAACATCTATG49753.191823798494871No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAATCAGGGTTGGTTCTATGAGACC46823.0038430200106503No Hit
CATAGATCATGGGACTTCAGCATGGTGGGTGCCTGATTGTTCTATGAGAC45752.935194749369655No Hit
CATAGAGGGTGTTTTTCGGTGTCACAACCAATGCTCTTTCATCTATGAGA45252.903116118229003No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGAGAGGCTGTTTGAGATCT38092.443750120294867No Hit
CATAGATCTGTGGCTCCCGATAAATGTGCTCATACAGAATTAGATCTAGC34322.201877241494351No Hit
CATAGAGAATTTGCACACCACGGGACCATGCTCACACCTTGATCTATGAG29851.9150942790969225No Hit
CATAGAACAAGGCCAGAATTACCCTGGGTGAGAAATGATGATGGCTCTAT27171.743152816183028No Hit
CATAGAACAAGGCCAGAATTACCCTGGGAGAGGCTGTTTGAGATCTATGA15440.9905881296233328No Hit
CATAGACCACACCCAAACACCACGTACACTGACGACATGGTTCTACACAT13340.8558578788325946No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCAGGCCTGAGATTGCTGCTAT10230.6563287931377392No Hit
CATAGACAGGAGGAGGAAGAAGAGGAATTCTTGCCAGGGATCTATGAGAC10130.6499130669096088No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACATGGATGAAGC9600.6159097179005177No Hit
CATAGACAGCTCACAGACTGCATACTACACTCAGACATGTTTCCTAGTTT9100.5838310867598658No Hit
CATAGAACAATGTAATAAGCATCGGAGGACCATGCTCACACCTTGATCTA8660.5556018913560921No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGTGAGCCCTTGTCCCTTTCTATG8550.5485445925051486No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAACAACAACATCTATGAGACCAAG7750.4972187826801055No Hit
CATAGACCCTTAGAGTTTCAGCCTCCCCCAGTATTTCATTATTAAAAGTT7530.4831041849782186No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTCTATGAGACACTTCAGTTGA7270.4664232967850796No Hit
CATAGAACCCAAAGAGTGGGCAACAGAACAACAACATCTATGAGACCAAG6180.39649188089845827No Hit
CATAGACAGCTCACAGACTGCATACTACACTGACGACATGGTGGGTGCCT5980.3836604284421975No Hit
CATAGAGGGCCAGAAGTTTGTTTACCTACACTGACGACATGGTGGGTGCC5680.3644132497578063No Hit
CATAGACTTGATGCCCAGGAAACCTCACACTGACGACATGGTGGGTGCCT5240.3361840543540326No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGTGCTCATACAGAATTAGATC5130.3291267555030892No Hit
CATAGACAGCTCACAGACTGCATACTGGGTGAGAAATGATGATGGCTCTA5060.32463574714339793No Hit
CATAGATTAGTTCTTATTCTTGGTATGGCACTGACAGCTGCTTTTCTCTT4700.3015391327221285No Hit
CATAGATGTCTCCCAGGCTAGAGTGCGCCCTTGTCCCTTTCTATGAGACC4040.2591953396164679No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGAGTGAGCCCTTGTCCCTTTCTA3250.2085111024142378No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACCATGCTCACAC3190.20466166667735952No Hit
CATAGAGAATTTGTACACCACGGGACATGGATGAAGCTGGATCTATGAGA3010.19311335946672484No Hit
CATAGACCCTTAGAGTTTCAGCCTCCCTTAGAGGCCACATCGCACCAGAG2980.19118864159828572No Hit
CATAGAACCCAAAGAGTGAGCCCTTGTCCCTTTCTATGAGACCAAGTCTC2900.18605606061578142No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGACGACATAGATTCT2900.18605606061578142No Hit
CATAGAGGGCCAGAAGTTTGTTTACCTACACTCAGACATGTTTCCTAGTT2740.17579089865077277No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGACACTGACGACATGGTGGGT2630.16873359979982935No Hit
CATAGACAGGAGGAGGAAGAAGAGGAGGGACATGGATGAAGCTGGATCTA2600.1668088819313902No Hit
CATAGATTAGTTCTTATTCTTGGTATGGCACAGACATGTTTCCTAGTTTC2540.16295944619451197No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCTTGTGCTCATACAGAATTAG2340.1501279937382512No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAACCCAAAGAGTGAGCCCTTGTCC2300.14756170324699905No Hit
CATAGATGTCTCCTAGGCTAGAGTGAGCCCTTGTCCCTTTCTATGAGACC2220.14242912226449472No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCACTGACGACATGGTTCTACACAT2140.13729654128199043No Hit
CATAGAGCAAAAGAGAAACATTAAGCCATGGTGGGTGCCTGATTGTTCTA2120.13601339603636434No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTATGCGTCCGCAGTTGTTCTTT2110.13537182341355128No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTGACGACATGGTGGGTGCCT2110.13537182341355128No Hit
CATAGACTTGATGCCCAGGAAACCTCCTGCCCCTGCAGGCTGAAAGTGCC2060.1321639602994861No Hit
CATAGAGCTTCTTTCTGTTCATATTGAGGAATTCTTGCCAGGGATCTATG2020.12959766980823395No Hit
CATAGATTCTCCCTTGTGCTTTTGGTCGGGACATGGATGAAGCTGGATCT2020.12959766980823395No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTGGGACATGGATGAAGCTGGAT2010.1289560971854209No Hit
CATAGAGCAAAAGAGAAACATTAAGCCATAGTGGGTGCCTGATTGTTCTA1930.1238235162029166No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG1900.12189879833447746No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCCCAAAGAGTGAGCCCTTGTCCCT1640.10521791014133845No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG1600.1026516196500863No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGACGACATGGTGGGT1580.10136847440446022No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG1570.10072690178164717No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG1570.10072690178164717No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG1560.10008532915883413No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)