FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807743

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807743
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences121254
Sequences flagged as poor quality0
Sequence length150
%GC36

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTGTTTACTCGGAGATTT1546312.752568987414847No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGAATGATATTGTTGCAGAT1360311.218598974054464No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAATATGGGCTGGGTGATCTATGT69515.732594388638725No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTTGCTCCTTCTCACACAAA69315.716100087419797No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTACACTGAGGAGAATGATA54874.5252115394131325No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCTCCAGACTCTATGTG50284.146667326438715No Hit
CATAGAAGTACCATCAGAGTGAACAGGGCAGAGAGTGTGTTGTATTCTAT46443.8299767430352816No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACCAAAATGTCAGGGGATCCTCTA37763.1141240701337685No Hit
CATAGATGGGATTATAGGTGTGAGCCATGCTGAAGTCCCATGATCTATGT33082.7281574216108337No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGGAGCTGACTTACTGTTCTATGTG27922.3026044501624687No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCTAGCCAAATTCCTTACCGATCTA20871.7211803321952264No Hit
CATAGAGGAGTGACTTTTGTTGCTGCACCTTCCACTACCCACCTGCCTCT15431.2725353390403615No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCATCCAGTCCAGCTCCTTCTATGT10940.9022382766754087No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAACCTCCCACCCCAGCTGTCTATG10770.8882181206393192No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCACTACCCACCTGCCT10730.8849192603955334No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACGGCAACATATCAGAAGCATCTA9230.7612120012535669No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTACGGCAACATATCAGAAGCAT9130.7529648506441025No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTGTTTACTCGGAGATTTGA8910.7348211193032808No Hit
CATAGAAACAGCAAAGCCCTCCACCACCCACCTGCCTCTATGTGTAGAAC7870.6490507529648507No Hit
CATAGAGGTGAGCGGCTGTCTTCAGCTCTTTGAGGCATCTATGTGTAGAA7460.6152374354660465No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTCCACTACCCACCTGCCTCTATGT7360.606990284856582No Hit
CATAGAGGCACGATCTTGTTTCACTGAGCTGAGGGTCACTTCTATGTGTA7340.6053408547346891No Hit
CATAGATCCCATACTCCTCCATTACCCTGGGTAGAGAGTTCTGTAGATGT7240.5970937041252247No Hit
CATAGATCCCATACTCCTCCATTACCCTTCCACTACCCACCTGCCTCTAT7060.5822488330281888No Hit
CATAGAAACAGCAAAGCCTTCCACTACCCACCTGCCTCTATGTGTAGAAC6510.5368895046761344No Hit
CATAGAACCAACCTCTCTATCTCCGTATGGGAAAGGTATGTGGCACATCT6350.5236940637009914No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTTCTGTTTACTCGGAGA5920.48823131608029424No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGGGAAAGGTATGTGGCACATCTAT5650.46596400943474026No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGTTTACTCGGAGATTTGACTG4660.38431721840104244No Hit
CATAGACCACACACACAACTGAGAGGAGAATGATATTGTTGCAGATTTCT4290.35380276114602405No Hit
CATAGAGGCACAGGGATAATGAGGGAGGAAACATTGGAAAGATGGGGATC4040.333184884622363No Hit
CATAGATCACCAGATGCCAGTTGTGCAATATGGGCTGGGTGATCTATGTG3820.3150411532815412No Hit
CATAGAGTGATCCTCCTTTCTCAGCCCCAGGTAGCAAAACAGAGTCTATG3480.28700084120936215No Hit
CATAGAGGTGAGCGGCTGTCTCCAGCTCTTTGAGGCATCTATGTGTAGAA3330.2746301152951655No Hit
CATAGAAGTACCATCAGAGTGAACAGGTCACTGACAGGTCTTAAAGCTCT3240.26720767974664755No Hit
CATAGACACAGGCCAATCTCAGCAGATACGATAGCGAGAAGAGTGGAGGC3000.24741451828393288No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTCACTGAGCTGAGGGTC2920.24081679779636134No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGGAGGAGAATGATATTG2860.2358685074306827No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTATACGGCAACATATCAGAAGC2830.23339436224784335No Hit
CATAGAGGTGAGCGGCTGTCTCCATTCTCTCAGGGCTGTTCTCTATGTGT2780.22927078694311115No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTGTTTACTCGGAGATTTGACTGT2710.22349778151648605No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGCATTCTCTCAGGGC2620.21607534596796807No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTAGCACTATTCTCTGGCCCGTC2500.20617876523661074No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACTTATCTGGGCACGGTGGTCTAT2480.20452933511471788No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTAACCTCCCACCCCAGCTGTCTATG2310.19050917907862833No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTCCCCAGGTAGCAAA2300.18968446401768188No Hit
CATAGAAGTACCATCAGAGTGAACCGGGCAGAGAGTGTGTTGTATTCTAT2210.1822620284691639No Hit
CATAGAAACAGCAAAGCCCTCCACCAACAATGCCTCACACACAGGTCTAT2210.1822620284691639No Hit
CATAGACCATCCCTTCTACAAGAGGCATCCCTTCCACTACCCACCTGCCT2200.18143731340821745No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGGGCAGAGAGTGTGTTGTATTC2190.18061259834727103No Hit
CATAGAGTGATCCTCCTTTCTCAGCCCATAGACCTTTTTCTGTAGTCAAG2170.17896316822537814No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTCTATGCATAGGGCACTGAGACCA2110.1740148778596995No Hit
CATAGAGTCCTTCCCTCTCACACATGTCTAACAATGCCTCACACACAGGT1950.16081943688455638No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTCTGTTTACTCGGAGATT1930.1591700067626635No Hit
CATAGAGTGCTCTCTTTCCCCACCCCAGGTAGCAAAACAGAGTCTATGTG1900.15669586157982415No Hit
CATAGAGGTGAGCGGCTGTCTCCATCCAGTCCAGCTCCTTCTATGTGTAG1840.1517475712141455No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGGAGGAGCTGACTTACTGTTCTATG1780.14679928084846686No Hit
CATAGAGCCCCCAGAGAAGAATGACCACACGGAAGACACAGCACACTCTT1760.14514985072657396No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTGCATTCTCTCAGGGCTGTT1740.14350042060468107No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCACACGGAAGACACAGCAC1690.13937684529994887No Hit
CATAGATACCTGTCCTCTGCCTCGAGGAGAATGATATTGTTGCAGATTTC1660.13690270011710953No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTCCACTACCCACCTGCCTCTATGT1630.13442855493427022No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGATGTGCAATATGGGCTGGG1590.13112969469048444No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGAACCAGACCTTTTTCTGTAGT1590.13112969469048444No Hit
CATAGAGGCACAGGGATAATGAGGGAGATTGGGAAAGGTATGTGGCACAT1570.12948026456859157No Hit
CATAGACACAGGCCAATCTCAGCAGGGCAGAGAGTGTGTTGTATTCTATG1540.12700611938575224No Hit
CATAGAGGTGAGCGGCTGTCTCCACCCCAGGTAGCAAAACAGAGTCTATG1540.12700611938575224No Hit
CATAGATTCAACCAGCCATCCCCAATTACGGCAACATATCAGAAGCATCT1500.12370725914196644No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTAGACCTTTTTC1430.11793425371534134No Hit
CATAGATGGGATTATAGGTGTGAGCCATGCATAGGGCACTGAGACCACAT1390.11463539347155557No Hit
CATAGAGTGCTCTCTTTCCCCACCCTACGATAGCGAGAAGAGTGGAGGCT1360.11216124828871625No Hit
CATAGATCCCATACTCCTCCATTACCCCAGGTAGCAAAACAGAGTCTATG1300.10721295792303759No Hit
CATAGAGTGCTCTCTTTCCCCACCCTGGTCCATCCAGTCCAGCTCCTTCT1250.10308938261830537No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTAGGTCACTGACAGGTCTTAAA1220.10061523743546605No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)