FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807750

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807750
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences70639
Sequences flagged as poor quality0
Sequence length150
%GC41

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG1272818.018375118560567No Hit
CATAGAGGTAAACAAAATAAGACATTACATAGGAGTACACTGCCATCACA1056714.959158538484408No Hit
CATAGAAGAGTGAGACTTGAGATGGGATCAGACTTTATGTGCAATCTATG52277.399595124506292No Hit
CATAGACACATGTAGGATGGGGTGGAGGATGATCAATGCTGCTTCTATGA27583.9043587819759624No Hit
CATAGAAAGTCTGGACCAAGTGCCTCACTGGAGCTTCCGCAGAGCCCCCT27123.8392389473237163No Hit
CATAGAGGGTGCTCCTGTGCTGGGTAGTGGTAGTCTATGAGACCAAGTCT25413.597163040246889No Hit
CATAGACTTCAGCCCTCACAAGCCTTACCTCAAATGCCAGGCTCTATGAG21863.094607794561078No Hit
CATAGAAAATAATGTGGCCGGGCATTGCTCTTGACATCTCTATGAGACCA18582.6302750605189766No Hit
CATAGACACATGTAGGATGGGGTGGCTGGGCATTGCTCTTGACATCTCTA17332.4533189880943955No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACACCTGTAATCACAGC16922.3952773963391327No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTGGTAGTCTATGAGACCAAGTCT12141.7185973753875337No Hit
CATAGAGGGTGCTCCTGTACTGGGTAGTGGTAGTCTATGAGACCAAGTCT11321.6025141918770085No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC9491.3434505018474214No Hit
CATAGACTTCAGCCCTCACAAGCCTTGGTATATTTTCTAAAGCCTGGGAT8871.2556802899248292No Hit
CATAGAGGTAAACAAAATAAGACATTACATAGGAGTACACTGACGACATG8491.2018856439077563No Hit
CATAGAAAATAATGTGGCTGGGCATTGCTCTTGACATCTCTATGAGACCA8181.1580005379464602No Hit
CATAGAGGTGTCCTTTCCCCACTTTACACTGACGACATGGTTCTACACAT7661.0843868118178344No Hit
CATAGAGGTGTCCTTTCCCCACTTTAACACTGCCATCACAGTTCATTGTA5940.8408952561616105No Hit
CATAGAAAGTCTGGACCAAGTGCCTCATGGTTCTACACATAGAAAGTCTG4820.6823426152691856No Hit
CATAGAGGTGTCCTTTCCCCACTTTACACTGACGACATGGTATATTTTCT4750.672433075213409No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGAGGATGATCAATGCTGCTTCTAT4350.615807132037543No Hit
CATAGAAAGTCTGGACCAAGTGCCTCTGACTGTGTTAATTTAAAAGAACA4160.5889098090290067No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTGCTGGAGGATGATCAATGCT3680.5209586772179674No Hit
CATAGAGCAGACAAACTTGCAAAAGACTCTTTCTGTCGGAAGGTTAATAC3650.5167117314797774No Hit
CATAGAAAGTCTGGACCAAGTGCCTCACAGTTCATTGTATTCTCTATGAG3310.4685796797802913No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACGCCTATAATTCCAGC3120.44168235677175494No Hit
CATAGAGCTATCTGGCAAAAACCCATCCTACACAGACAGGATGCGCAGAT3030.4289415195571852No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTGGTATATTTTCTAAAGCCTGGG2920.413369385183822No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTGTGCTGGGTAGTGGTAGTCT2880.4077067908662354No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGAGACAGCCGCTCACCTCTATGAG2040.2887923101969167No Hit
CATAGAACTGTTTAAGAGAAGTCAGCGATGTTCCATGTGTGTGCGATGTT1950.27605147298234683No Hit
CATAGAACTCCATCATAAGTCAAAGAGCAATGCCATGATTGTAAGTTTCT1940.2746358244029502No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTATATTTTCTAAAGCCTGGGATC1810.25623239287079375No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACGCCTGTAATCCCAGC1800.2548167442913971No Hit
CATAGAGGTAAACAAAATAAGACATTACATAGGAGTACATTGACGACATG1670.23641331275924063No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACACCTGTAATCCCAGC1640.23216636702105067No Hit
CATAGATCATGGGACTTCAGCATGGGCATTGCTCTTGACATCTCTATGAG1550.21942552980648086No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGTTCACTCCTGTAATCCCAGC1510.21376293548889422No Hit
CATAGACACATGTAGGATGGGGTGGGCATTGCTCTTGACATCTCTATGAG1500.2123472869094976No Hit
CATAGACTTCAGCCCTCACAAGCCTTGCCATGATTGTAAGTTTCTTGAGT1410.19960644969492775No Hit
CATAGATGAAAGACAAGCAGGGAAGCCAGACAGGATGCGCAGATGGTCTA1400.19819080111553108No Hit
CATAGACACATGTAGGATGGGGTGGCTGTCATGATTATCACCTTCTATGA1380.1953595039567378No Hit
CATAGAACCAAAAATGGCTAGGCATGTCTATGAGACCAAGTCTCTGCTAC1210.17129347810699472No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGTGTGTGCCTGTAGTCCCAGC1190.16846218094820142No Hit
CATAGACACATGTAGGATGGGGTGGAGACAGCCGCTCACCTCTATGAGAC1190.16846218094820142No Hit
CATAGAACCAAAAATGGCTAGGCATGGGCATTGCTCTTGACATCTCTATG1120.15855264089242488No Hit
CATAGAAGCATGGAAGACAAACAGCATGGCGGTGTTTGCAGATTTGGACC1100.15572134373363156No Hit
CATAGAACTCCATCATAAGTCAAAGAGCAATGCCATCACAGTTCATTGTA1070.1514743979954416No Hit
CATAGACACATGTAGGATGGGGTGGCTCCTGTGCTGGGTAGTGGTAGTCT1040.14722745225725167No Hit
CATAGACACATGTAGGATGGGGTGGCTGCCATGATTGTAAGTTTCTTGAG900.12740837214569856No Hit
CATAGAAAATAATGTGGCCGGGCATGGTAGCTCATGCCTGTAATCCCAGT780.11042058919293873No Hit
CATAGACACATGTAGGATGGGGTGGCCCCTGTCCCGGGTGCCACGAGGTC750.1061736434547488No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)