FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807751

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807751
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences70639
Sequences flagged as poor quality0
Sequence length150
%GC40

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA1278118.09340449326859No Hit
CATAGAGAATACAATGAACTGTGATGGCAGTGTACTCCTATGTAATGTCT1054014.920936026840698No Hit
CATAGATTGCACATAAAGTCTGATCCCATCTCAAGTCTCACTCTTCTATG52757.467546256317331No Hit
CATAGACTACCACTACCCAGCACAGGAGCACCCTCTATGTGTAGAACCAT31814.5031781310607455No Hit
CATAGAAGCAGCATTGATCATCCTCCACCCCATCCTACATGTGTCTATGT27743.9270091592463086No Hit
CATAGAGCCTGGCATTTGAGGTAAGGAACACAGGTGGATTTGGAAGCTGC26793.792522544203627No Hit
CATAGAGCCTGGCATTTGAGGTAAGGCTTGTGAGGGCTGAAGTCTATGTG21843.091776497402285No Hit
CATAGAGATGTCAAGAGCAATGCCCGGCCACATTATTTTCTATGTGTAGA18692.64584719489234No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGTGATTACAGGTG18682.6444315463129433No Hit
CATAGAGATGTCAAGAGCAATGCCCAGCCACCCCATCCTACATGTGTCTA17412.4646441767295686No Hit
CATAGACTACCACCACCCAGTACAGGAGCACCCTCTATGTGTAGAACCAT12061.7072721867523608No Hit
CATAGACTACCACTACCCAGTACAGGAGCACCCTCTATGTGTAGAACCAT11411.6152550290915784No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA9681.3703478248559577No Hit
CATAGATCCCAGGCTTTAGAAAATATACCAAGGCTTGTGAGGGCTGAAGT8931.264174181401209No Hit
CATAGAGATGTCAAGAGCAATGCCCAGCCACATTATTTTCTATGTGTAGA8741.2372768583926725No Hit
CATAGATCCCAGGCTTTAGAAAATATACCATGTCGTCAGTGTACTCCTAT7101.0051104913716218No Hit
CATAGAGAATACAATGAACTGTGATGGCAGTGTTAAAGTGGGGAAAGGAC5840.826738770367644No Hit
CATAGACTCAAGAAACTTACAATCATGGCACTTGGTCCAGACTTTCTATG5320.753125044239018No Hit
CATAGATCCCAGGCTTTAGAAAATATACCATGTCGTCAGTGTAAAGTGGG4660.6596922379988391No Hit
CATAGAAGCAGCATTGATCATCCTCCACCCAGTACAGGAGCACCCTCTAT4460.6313792664109061No Hit
CATAGACTGTTCTTTTAAATTAACACAGTCAGAGGCACTTGGTCCAGACT4210.5959880519259899No Hit
CATAGAAGCAGCATTGATCATCCTCCAGCAGCATTTTAACACAGCATTGA3680.5209586772179674No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAGAGTGCTGGAATTATAGGCG3460.4898144084712411No Hit
CATAGAGAATACAATGAACTGTGATGGCACTTGGTCTCATAGAGAATACA3160.44734495108934164No Hit
CATAGACCATCTGCGCATCCTGTCTGTGTAGGATGGGTTTTTGCCAGATA3010.42611022239839186No Hit
CATAGACTACCACTACCCAGCACAGCATTTTAACACAGCATTGAAGTTCT2960.4190319795014085No Hit
CATAGATCCCAGGCTTTAGAAAATATACCACCACCCAGTACAGGAGCACC2900.4105380880250286No Hit
CATAGAACATCGCACACACATGGAACACACACACAAAAATGCATACTCTT2900.4105380880250286No Hit
CATAGAGGTGAGCGGCTGTCTCCACCCAGTACAGGAGCACCCTCTATGTG2170.30719574172907316No Hit
CATAGACTCAAGAAACTTACAATCATGGCATTGCTCTTTGACTTATGATG2050.2902079587763134No Hit
CATAGATCCCAGGCTTTAGAAAATATACCACCCAGTACAGGAGCACCCTC1910.27038887866476025No Hit
CATAGAACATCGCACACACATGGAACATCGCTGACTTCTCTTAAACAGTT1890.2675575815059669No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGAG1590.22508812412406742No Hit
CATAGAGATGTCAAGAGCAATGCCCATGCTGAAGTCCCATGATCTATGTG1550.21942552980648086No Hit
CATAGAGAATACCATGAACTGTGATGGCAGTGTACTCCTATGTAATGTCT1530.2165942326476875No Hit
CATAGAGATCAATCCCTGTCTACATAACCATGTCGTCAATGTACTCCTAT1520.2151785840682909No Hit
CATAGACTCAAGAAACTTACAATCATGGCAAGGCTTGTGAGGGCTGAAGT1470.20810034117130766No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGCG1460.206684692591911No Hit
CATAGAGATGTCAAGAGCAATGCCCACCCCATCCTACATGTGTCTATGTG1460.206684692591911No Hit
CATAGACCATCTGCGCATCCTGTCTGGCTTCCCTGCTTGTCTTTCATCTA1390.19677515253613445No Hit
CATAGAAGGTGATAATCATGACAGCCACCCCATCCTACATGTGTCTATGT1370.19394385537734113No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGTG1310.18544996390096122No Hit
CATAGACCATCCTCCCACCTTGACCTTCCCGGTAGCTGGGACTACAGGCA1260.178371721003978No Hit
CATAGAGGTGAGCGGCTGTCTCCACCCCATCCTACATGTGTCTATGTGTA1230.17412477526578804No Hit
CATAGAGATGTCAAGAGCAATGCCCATGCCTAGCCATTTTTGGTTCTATG1140.16138393805121817No Hit
CATAGACTACCACTACCCAGCACAGGAGCCACCCCATCCTACATGTGTCT1080.15289004657483826No Hit
CATAGAGAATACAATGAACTGTGATGGCATTGCTCTTTGACTTATGATGG1040.14722745225725167No Hit
CATAGAGCATACAATGAACTGTGATGGCAGTGTACTCCTATGTAATGTCT880.12457707498690525No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGCCACCCCATCCTACATGTG860.12174577782811195No Hit
CATAGACCATCTGCGCATCCTGTCTGGGGTTCATACACACGATCCGACAT810.11466753493112869No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAACAGGTACTGGGATTACAGG810.11466753493112869No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGTATTACAGGTG740.10475799487535213No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGCA730.1033423462959555No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA710.10051104913716218No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)