FastQCFastQC Report
Wed 8 May 2024
EGAF00005807752

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807752
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences132565
Total Bases19.8 Mbp
Sequences flagged as poor quality0
Sequence length150
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG1715712.942330177648701No Hit
CATAGAGAGATTTTGGGCTGAGACGATAATGCCGCATATCTACAACTATC72955.502960811677291No Hit
CATAGAGCCAAGGAAAGTTGAATGGAGACAGCCGCTCACCTCTATGAGAC67715.107683023422472No Hit
CATAGACCTTTGGGTTCATATCATCTGGAGACAGCCGCTCACCTCTATGA38582.910270433372308No Hit
CATAGATCCTCTCATTGTCCAGTTTGGAGACAGCCGCTCACCTCTATGAG34602.610040357560442No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC33732.544412175159356No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTACACATGGCTATGCAATCTAT29862.2524799155131445No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAACCTGTCTCTACT29362.214762569305624No Hit
CATAGACCTGGGCTTAGGGGCTACACATGGCTATGCAATCTATGAGACCA28972.1853430392637576No Hit
CATAGACCTGGGCTTAGGGGCTATACATGGCTATGCAATCTATGAGACCA28412.143099611511334No Hit
CATAGACAATTAAATTTTCTTAAGGGGTTGCACAGATCATTTAAGCTCAA26051.9650737374118357No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACACTCA25691.9379172481424205No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAATCA23181.7485761701806661No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGGAAAGGATTCTAT23121.7440500886357635No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAACAA19451.4672047674725606No Hit
CATAGATCATGGGACTTCAGCATGGCTACACATGGCTATGCAATCTATGA17621.3291592803530343No Hit
CATAGAAACCCCAAAGGCTATGTTCAAAATGGTCAAACAGGAGGTCTATG14311.0794704484592463No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCTGTCTCTA12010.9059706559046506No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCATCTCTA11640.878059819711085No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTTCCTTCTGCTGGCTATTCTATG10360.7815034134198318No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCGTCTCTA10320.7784860257232301No Hit
CATAGATCATGGGACTTCAGCATGGCCATCCAATAATAAATGGGGGCAAG10100.7618903933919209No Hit
CATAGACACCATGCCTGGCTAATTTTTTGCGTTTTTAGTAGAGATGGGGT9870.7445404141364613No Hit
CATAGATCCCATCCAATAATAATGAACAAGCAATGGGGAAAGGATTCTAT9670.7294534756534531No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGATAGGGTT8580.6472296609210576No Hit
CATAGATCCCATCCAATAATAATGAGCAGAATTACCTCTGGATGGTCTAT8490.6404405386037039No Hit
CATAGATCATGGGACTTCAGCATGGCATCATGGAGACAGCCGCTCACCTC7200.5431297853883No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGCAAGCAATGACAG7140.5386037038433975No Hit
CATAGAGCAACAGGGACTCTCATTCACTGCTGGTGGGAATGCAAACTGGA6800.5129559084222834No Hit
CATAGACCTGGGCTTAGGGGCTATACGTGAATGTGGATCAGAACTTCTAT6320.4767472560630634No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCACAGATCATTTAAGCTCAATCT5770.4352581752347905No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTGGAGACAGCCGC5270.3975408290272696No Hit
CATAGATCATGGGACTTCAGCATGGCGTTCTACACAAAGTCACGAAAGTG5040.38019084977181006No Hit
CATAGAGCTGGCTTCCTAACTTCCAACCTTCCTAACCATGGGCATATCTA4940.3726473805303059No Hit
CATAGATCATGGGACTTCAGCATGGCTCATAGAATCCTTTCCCTCACTCT4600.3469995851091917No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTTGTAGAGACAGAGTT3950.29796703503941463No Hit
CATAGACCAATAAAAGTTGATGGGATGAACCAATGGGCAAGCAATGACAG3920.29570399426696337No Hit
CATAGACACCATGCCTGGCTAATTTTTTGTATTTTTAGTGGAGACAGCCG3820.2881605250254592No Hit
CATAGAACCTCTTTTGGGGCAAAGTTCCAATCTACAATGGGCAAGCAATG3660.27609097423905254No Hit
CATAGATCATGGGACTTCAGCATGGCAAAACCTTGACTCCACTAAAAATA3510.2647757703767963No Hit
CATAGATCATGGGACTTCAGCATGGCCTCATAGAGCAGAATTACCTCTGG3480.262512729604345No Hit
CATAGAGCTGGCTTCCTAACTTCCAATGGGCAAGCAATGACAGTCTATGA3230.2436540565005846No Hit
CATAGATGTCCATCATGTGGAAGCTGGAGAGTCACTTCTTTTGATAATTC3200.24139101572813337No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACTTGCG3200.24139101572813337No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCATACACTGACGACATGGAGACA2810.2119714856862671No Hit
CATAGATCATGGGACTTCAGCATGGCCACTGACTGATACAGGAAGGCCTT2540.19160411873420585No Hit
CATAGACACCATGCCTGGCTAATTTTTTGTATTAATCCCAGCTACTCAGG2390.18028891487194962No Hit
CATAGACACCATGCCTGGCTAATTTTTAAATATTTTGTAGAGACCGGGTT2390.18028891487194962No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTCACTGACGACATGGTTCTACAC2290.17274544563044544No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGCGTATTCTAAATATACAATCA2280.17199109870629503No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGTGGTGTGGTG2170.16369328254064044No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCTCATCTCTA2130.16067589484403877No Hit
CATAGATCATGGGACTTCAGCATGGCTACGGTACCATTTTCCCCCAAGTC2060.15539546637498586No Hit
CATAGACACCATGCCTGGCTAATTTTGTATTTTTAGTAGAGACAGGGTTT2020.15237807867838418No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATATCCCCAGAAATGTTAGCA2010.15162373175423377No Hit
CATAGACACCATGCCTGGCTAATTTTTGTGTTTTTAGTGGAGACAGCCGC1960.14785199713348168No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCGAAACCCCATCTCTA1860.1403085278919775No Hit
CATAGACACCATGCCTGGCTAATTTTAAAATTAGTACCTATAATCTCAGC1770.13351940557462377No Hit
CATAGAGAGATTTTGGGCTGAGACGACACTGACTGATACAGGAAGGCCTT1710.12899332402972127No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCGAAACCCCGTCTCTA1670.1259759363331196No Hit
CATAGATCATGGGACTTCAGCATGGCACACTGACTGATACAGGAAGGCCT1670.1259759363331196No Hit
CATAGACACCATGCCTGGCTAATTTTGTATTTTTAGTGGAGACAGCCGCT1660.12522158940896919No Hit
CATAGATCATGGGACTTCAGCATGGCTAATTTTTGTATTTTTAGTAGAGA1640.12371289556066835No Hit
CATAGACCTTTGGGTTCATATCATCTGGCTACACATGGCTATGCAATCTA1640.12371289556066835No Hit
CATAGATCATGGGACTTCAGCATGGCAAAACCCCGTCTCTACTAAAAATA1630.12295854863651794No Hit
CATAGAGAGATTTTGGGCTGAGACGATGAGGTTTTCTAAATATACAATCA1620.12220420171236751No Hit
CATAGATCATGGGACTTCAGCATGGCCAACACGGTGAAACCCTGTCTCTA1540.11616942631916419No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCAAAACCCCATCTCTA1520.11466073247086335No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAATCCCATCTCTA1500.11315203862256251No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTCTCTAAATATACACTCA1470.11088899785011126No Hit
CATAGAACTTCACAAGGGCTTTAGGGCTACACATGGCTATGCAATCTATG1460.11013465092596085No Hit
CATAGACACCATGCCTGGCTAATTTTTTGTATTTTTAGTAGAGATGGGGT1440.10862595707766003No Hit
CATAGATCATGGGACTTCAGCATGGCCAAGATGGTGAAACCCCATCTCTA1430.1078716101535096No Hit
CATAGATCATGGGACTTCAGCATGGCTAATTTTTGTATTTTTAGTGGAGA1420.10711726322935919No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATAGTGAAACCCCGTCTCTA1410.10636291630520876No Hit
CATAGATCCCATCCAATAATAATGAGCAATGGGCAAGCAATGACAGTCTA1390.10485422245690793No Hit
CATAGATCATGGGACTTCAGCATGGCTAATTTTTTGCGTTTTTAGTAGAG1390.10485422245690793No Hit
CATAGACAGGGAGGCGTATAAGTGATGGAGACAGCCGCTCACCTCTATGA1380.10409987553275753No Hit
CATAGATCATGGGACTTCAGCATGGCAAAACCCTGTGTCTACTAAAAATA1370.1033455286086071No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGATGAAACCCCATCTCTA1350.10183683476030626No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)