FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807754

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807754
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences473951
Sequences flagged as poor quality0
Sequence length150
%GC42

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG8123717.140379490706845No Hit
CATAGAGAATTTGCACACCACGGGACATGGATGAAGCTGGATCTATGAGA398438.406565235646724No Hit
CATAGATGTCTCCCAGGCTAGAGTGAGCCCTTGTCCCTTTCTATGAGACC251275.301602908317527No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGTGAGAAATGATGATGGCT147453.1110811033208075No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGAGAGGCTGTTTGAGATCT135582.8606332722159045No Hit
CATAGATCATGGGACTTCAGCATGGTGGGTGCCTGATTGTTCTATGAGAC131282.769906593719604No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTGGGAGAGGCTGTTTGAGATC112172.3667003551No Hit
CATAGAGAATTTGCACACCACGGGACCATGCTCACACCTTGATCTATGAG94191.987336243620121No Hit
CATAGAACAAGGCCAGAATTACCCTGGGAGAGGCTGTTTGAGATCTATGA89271.8835280440383078No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGCAACAGAACAACAACATCTATG83151.7544007713877596No Hit
CATAGACCTTCCTGTTGGCCACACAGAATTAGCGGAGAGTGAGAACTCTA66991.4134372540621287No Hit
CATAGAGGGTGTTTTTCGGTGTTACAACCAATGCTCTTTCATCTATGAGA63051.330306297486449No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAACAGAACAACAACATCTATG58631.2370477116832752No Hit
CATAGAACAAGGCCAGAATTACCCTGGGTGAGAAATGATGATGGCTCTAT57661.2165814609527144No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAATCAGGGTTGGTTCTATGAGACC52041.0980038020808058No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGTGAGCCCTTGTCCCTTTCTATG51761.0920960183647677No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACATGGATGAAGC47100.9937736179478469No Hit
CATAGAGGGTGTTTTTCGGTGTCACAACCAATGCTCTTTCATCTATGAGA40600.8566286388255326No Hit
CATAGAGAAGAGAAGGCGACAATGGCCGCTAAGCCGAGAAGATCTCTATG35880.7570402847551752No Hit
CATAGATCTGTGGCTCCCGATAAATGTGCTCATACAGAATTAGATCTAGC34810.7344641112688864No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGCAACAGAACAACAACATC34160.720749613356655No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGACGACATGGGCAAC25080.5291686271365605No Hit
CATAGAACAAGGCCAGAATTACCCTGGGCAACAGAACAACAACATCTATG24410.5150321446731835No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTGGGTGAGAAATGATGATGGC23850.5032165772411071No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGACACTGACGACATGGTGGGT23680.4996297085563698No Hit
CATAGATGTCTCCCAGGCTAGAGTGCGCCCTTGTCCCTTTCTATGAGACC22110.4665039212914415No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACCATGCTCACAC21960.46333903715784963No Hit
CATAGATCTGTGGCTCCCGATAAATGTGTATCGGCAGTGAGGTACAGAAA21140.4460376705608808No Hit
CATAGATCTGTGGCTCCCGATAAATGTTACGTCCGCAGTTGTTCTTTCCT21140.4460376705608808No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTGCTACCGTATGTGCTCATAC20920.4413958404982794No Hit
CATAGACTTGATGCCCAGGAAACCTCTATCGGCAGTGAGGTACAGAAATC20480.4321121803730766No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCAGGCCTGAGATTGCTGCTAT20260.4274703503104751No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGAGTGAGCCCTTGTCCCTTTCTA20260.4274703503104751No Hit
CATAGACCACACCCAAACACCACGTAACACTGATCTGAGCAAGGATAGCC18690.39434456304554694No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAACCCAAAGAGTGAGCCCTTGTCC18630.39307860939211015No Hit
CATAGAGCAAAAGAGAAACATTAAGCCATAGTGTGCCGCTAAGCCGAGAA18620.39286761711653734No Hit
CATAGACTTGATGCCCAGGAAACCTCACACTGACGACATGGTGGGTGCCT18420.38864777160508157No Hit
CATAGACTTGATGCCCAGGAAACCTCGGCAGTGAGGTACAGAAATCTATG18320.38653784884935366No Hit
CATAGAATGCAGGAGAATATACACAGGTTACACTGACGACATGGTGGGTG16790.35425603068671657No Hit
CATAGAGGGCCAGAAGTTTGTTTACCTGAGGCCTGAGATTGCTGCTATCT16200.34180748642792186No Hit
CATAGAGAAGAGAAGGCGACAATGGCTGCTTTTCTCTTCTTGGCATCTAT15620.32956993444469995No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTCAGACATGTTTCCTAGTTT15350.32387314300423464No Hit
CATAGACAGCTGACCAGAAAATGTTTCAGAATTAGCGGAGAGTGAGAACT15230.3213412356973611No Hit
CATAGACCACACCCAAACACCACGTACACTGACGACATGGTTCTACACAT14060.29665513945534455No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTCTATTGGGCAACAGAACAAC13490.28462857974769545No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCACTTCTCGGCAGTGAGGTACA13440.28357361836983147No Hit
CATAGATTAGTTCTTATTCTTGGTATGGCACTACACTGACGACATGGTGG13320.28104171106295794No Hit
CATAGAGGGTGTTTTTCGGTGTCACAACACTGACGACATGGTGGGTGCCT13210.2787207960316573No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTCTATGAGCTGCTTTTCTCTT13110.27661087327592937No Hit
CATAGAGAAGAGAAGGCGACAATGGCATGAACCTGGGAGGTGGAGCTTGC12790.2698591204576No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCACTGACGACATGGTTCTACACAT12490.2635293521904163No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGACACTGACGACATGGTTCTA12390.2614194294346884No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTGAGAATTAGCGGAGAGTGAGA12220.2578325607499509No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGACGACATGGTGGGT12150.25635561482094144No Hit
CATAGACTTGATGCCCAGGAAACCTCAGACATGTTTCCTAGTTTCAGTTC12100.25530065344307745No Hit
CATAGACAGCTGACCAGAAAATGTTTCAGTGTCATGGTGGGTGCCTGATT12060.2544566843407863No Hit
CATAGAACCCAAAGAGTGAGCCCTTGTCCCTTTCTATGAGACCAAGTCTC11500.24264111690870996No Hit
CATAGAGAATTTGCACACCACGGGACATGGATGAAGCTGGACCTATGAGA11350.23947623277511812No Hit
CATAGATTAGTTCTTATTCTTGGTATGGCACACACTGACTCTTCACTATG11350.23947623277511812No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCAGCAGAATCAGGGTTGGTTCT10550.2225968507292948No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTGGCCTGGGCAACAGAACAAC10090.2128912060529464No Hit
CATAGAGGGCCAGAAGTTTGTTTACCTACACTCAGACATGTTTCCTAGTT9990.21078128329721849No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCCCAAAGAGTGAGCCCTTGTCCCT9420.19875472358956936No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTGACGACATGGTGGGTGCCT9090.19179197849566726No Hit
CATAGAACAATGTAATAAGCATCGGAGGACCATGCTCACACCTTGATCTA8910.18799411753535705No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAAGAGTGAGCCCTTGTCCCTTTCT8200.17301366596968884No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGTACGGTAGCTGCTTTTCTCT7690.1622530599154765No Hit
CATAGAGGGCCAGAAGTTTGTTTACCTACACTGACGACATGGTGGGTGCC7650.16140909081318533No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGACACTGACGACTCTTCACTA7630.16098710626203974No Hit
CATAGACCACACCCAAACACCACGTAGAGACTTGGGCAACAGAACAACAA7500.15824420667959346No Hit
CATAGATTAGTTCTTATTCTTGGTATGGCACACTGACGACATGGTGGGTG7330.154657337994856No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCAGGCTAGAGTGAGCCCTTGT7230.1525474152391281No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCATAGAACCCAAAGAGTGAGCCCT7040.14853856200324506No Hit
CATAGACAGCTGACCAGAAAATGTTTCAGACATGTTTCCTAGTTTCAGTT6900.14558467014522597No Hit
CATAGAACCCAAAGAGTGAGCAGCAGTAGAACCCAAAGAGTGAGCCCTTG6850.14452970876736201No Hit
CATAGAATGCAGGAGAATATACACAGGTTACACTGGGACATGGATGAAGC6800.14347474738949806No Hit
CATAGATGTCTCCCAGGCTAGAGTGAGCCCTTGTCCCTTTCCATGAGACC6760.14263077828720688No Hit
CATAGAACCCAAAGAGTGAGCAGCAGGCAGTCTCAAACGTTGTGTCTATG6410.1352460486421592No Hit
CATAGAACCCAAAGAGTGAGCAGCAGGAACCCAAAGAGTGAGCCCTTGTC6380.13461307181544085No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAAGAGGCCTGAGATTGCTGCTATC6210.13102620313070337No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTTCCCTTGTGCTCATACAGAAT6130.12933826492612105No Hit
CATAGACAGGAGGAGGAAGAAGAGGAATTCTTGCCAGGGATCTATGAGAC6040.12743933444596595No Hit
CATAGAACCCAAAGAGTGAGCAGCAGATCTATGGGGTGGTCTTACTCTTC5950.12554040396581082No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTGGGACATGGATGAAGCTGG5830.12300849665893732No Hit
CATAGAACCCAAAGAGTGAGCAGCAGACCCAAAGAGTGAGCCCTTGTCCC5830.12300849665893732No Hit
CATAGAACCCAAAGAGTGAGCAGCAGTTCTACACATAGAACCCAAAGAGT5820.12279750438336454No Hit
CATAGAACCCAAAGAGTGGGCAACAGAACAACAACATCTATGAGACCAAG5640.11899964342305429No Hit
CATAGACAGGAGGAGGAAGAAGAGGACCTTAGAGAGTTGCCGAGGGAACT5450.11499079018717125No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGCATCAAGTCTGGGAGAGG5360.11309185970701612No Hit
CATAGAACCCAAAGAGTGAGCAGCAGGTTCTACACATAGAACCCAAAGAG5350.11288086743144334No Hit
CATAGACCACACCCAAACACCACGTACACTGAGACATGGTGGGTGCCTGA5310.11203689832915216No Hit
CATAGACCTTCCTGTTGGCCACACAGGGACATGGATGAAGCTGGATCTAT5230.11034896012456985No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCACATAGAACCCAAAGAGTGAGCC5220.11013796784899706No Hit
CATAGATCATGGGACTTCAGCATGGCGTCAGTGTGAGGCCTGAGATTGCT5210.10992697557342425No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAACAACAACATCTATGAGACCAAG5080.10718407599097797No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCAGGCAGTCTCAAACGTTGTG4870.10275323820394937No Hit
CATAGACTTGATGCCCAGGAAACCTCCTGCCCCTGCAGGCTGAAAGTGCC4800.10127629227493981No Hit
CATAGACAGGAGGAGGAAGAAGAGGAGGGACATGGATGAAGCTGGATCTA4780.10085430772379424No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)