FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807763

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807763
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences97219
Sequences flagged as poor quality0
Sequence length150
%GC45

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA3481935.81501558337362No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGTGATTACAGGTG54665.622357769571792No Hit
CATAGATTGCACATAAAGTCTGATCCCATCTCAAGTCTCACTCTTCTATG47184.852960840987873No Hit
CATAGACTACCACTACCCAGCACAGGAGCACCCTCTATGTGTAGAACCAT29813.0662730536212055No Hit
CATAGAGCCTGGCATTTGAGGTAAGGCTTGTGAGGGCTGAAGTCTATGTG19852.041781956201977No Hit
CATAGAGATGTCAAGAGCAATGCCCAGCCACCCCATCCTACATGTGTCTA18221.8741192565239304No Hit
CATAGACTGTTCTTTTAAATTAACACAGTCAGAGACACTCCTATGTAATG15861.6313683539225872No Hit
CATAGAAGCAGCATTGATCATCCTCCACCCCATCCTACATGTGTCTATGT13661.4050751396331993No Hit
CATAGACTACCACTACCCAGTACAGGAGCACCCTCTATGTGTAGAACCAT12341.2692992110595664No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGTG11111.1427807321614087No Hit
CATAGACTACCACCACCCAGTACAGGAGCACCCTCTATGTGTAGAACCAT10291.058435079562637No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTATTACTACAGGTG9921.0203766753412398No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAGAGTGCTGGAATTATAGGCG8300.8537425811826905No Hit
CATAGAGGGACGGAGGCAAGAGGATAATGCTCTATGTGTAGAACCATGTC7850.8074553328053158No Hit
CATAGATGACATAGACCTTATACCCTCATCAGTGTGCTCTTTGACTTATG7010.7210524691675496No Hit
CATAGAGGGACGGAGGCAAGAGGATAGCAGAGACTTGGTCTCATAGAGGC6520.6706507987121859No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAGGTGTAAGGGAAGCCAC6430.661393349036711No Hit
CATAGAGATGTCAAGAGCAATGCCCGGCCACATTATTTTCTATGTGTAGA5840.600705623386375No Hit
CATAGATGACATAGACCTTATACCCTCATCAGTGTCGCTGACTTCTCTTA5830.5996770178668779No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAAGTGAAGGAGAGGCCAC5790.5955625957888889No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGCG5690.5852765405939168No Hit
CATAGAGATGTCAAGAGCAATGCCCAGCCACATTATTTTCTATGTGTAGA5280.5431037142945309No Hit
CATAGAGGTAGGCATTTCATCTATATTGCAACTCCTATGTAATGTCTTAT4670.4803587776052006No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGAGATTACACACG4580.47110132792972564No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGAG4270.4392145568253119No Hit
CATAGAAGCAGCATTGATCATCCTCCACCCAGTACAGGAGCACCCTCTAT4250.4371573457863175No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGCA4130.4248140795523509No Hit
CATAGACCATCCTCCCACCTTGACCTCTCAAAGTGCTAGGGTTACAGGCA3810.3918987029284399No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAACAGGTACTGGGATTACAGG3490.35898332630452895No Hit
CATAGAAGGTGATAATCATGACAGCCAACTGATCTTTGACAAAGCATACA3340.3435542435120707No Hit
CATAGAAGGTGATAATCATGACAGCCAACTGATCTTCAACAAAGTAAACA3310.34046842695357904No Hit
CATAGAGAATACAATGAACTGTGATGGCATTGCTCTTTGACTTATGATGG3160.32503934416112074No Hit
CATAGATCCCAGGCTTTAGAAAATATACCACCACCCAGTACAGGAGCACC2980.3065244448101708No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGTTAGGATTACAGGCA2660.2736090681862599No Hit
CATAGAAGCAGCATTGATCATCCTCCATGTGTAGCATTTTAACACAGCAT2610.2684660405887738No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGGGCTGGGATGACACGCA2560.26332301299128774No Hit
CATAGAGATGTCAAGAGCAATGCCCACCCCATCCTACATGTGTCTATGTG2330.23966508604285172No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTAGGATTACAAGTG2190.22526460876989068No Hit
CATAGACCATCCTCCCACCTTGACCTCCATCTTGACCTCCCAAAGTGCTG2100.21600715909441567No Hit
CATAGACCATCCTCCCACCTTGACCTTCCAAAGTGCTAGGATAATAGGTG2030.2088069204579352No Hit
CATAGACCATCCTCCCACCTTGACCTTCCCGGTAGCTGGGACTACAGGCA1900.19543504870447137No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGTATTACAGGTG1820.1872062045484936No Hit
CATAGAGAATACAATGAACTGTGATGGCACTTGGTCTCATAGAGAATACA1690.17383433279502977No Hit
CATAGAAGGTGATAATCATGACAGCCAAACATGCCTAGCCATTTTTGGTT1690.17383433279502977No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTACTGGGATTATAGGCG1680.17280572727553256No Hit
CATAGAGCCTGGCATTTGAGGTAAGGGAACAAAAGCCACCCCATCCTACA1650.1697199107170409No Hit
CATAGATCCCAGGCTTTAGAAAATATACCATGTCGTCAGTGTACTCCTAT1610.16560548863905203No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGAGATTACAGAAG1590.1635482776000576No Hit
CATAGAGGGACGGAGGCAAGAGGATAGAGGGACGGAGGCACTTGGTCCAG1580.16251967208056037No Hit
CATAGAGATGTCAAGAGCAATGCCCATGCTGAAGTCCCATGATCTATGTG1570.16149106656106318No Hit
CATAGAAGGTGATAATCATGACAGCCAACTGATTTTCAACAAAGCAAAAA1560.16046246104156595No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA1550.15943385552206873No Hit
CATAGACCATCCTCCCACCTTGACCTCCCCAGTGCTGGAATTACAGGAGT1550.15943385552206873No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG1530.15737664448307428No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA1510.15531943344407986No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA1470.151205011366091No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA1460.15017640584659375No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGAGATTACAGGCA1430.14709058928810212No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA1380.14194756169061604No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAATTTCTGGGATTACAGGGG1380.14194756169061604No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGAATTACAGATG1360.1398903506516216No Hit
CATAGAAGGTGATAATCATGACAGCCACCCCATCCTACATGTGTCTATGT1340.13783313961262716No Hit
CATAGAGGGACGGAGGCAAGAGGATACGGTAGAGAGACTTGGTCTCATAG1340.13783313961262716No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTTGGATTACAGGTG1330.13680453409312995No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA1320.13577592857363271No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA1320.13577592857363271No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAATGCTGGGATTACAGGCG1310.1347473230541355No Hit
CATAGACCATCCTCCCACCTTGACCTCTTAAAGTGCTGCGATTACAAGCA1290.13269011201514105No Hit
CATAGACCATCCTCCCACCTTGACCTTACGGTAGCAGAGGCACTTGGTCC1290.13269011201514105No Hit
CATAGACCATCTGCGCATCCTGTCTGGCTTCCCTGCTTGTCTTTCATCTA1240.12754708441765497No Hit
CATAGAGATGTCAAGAGCAATGCCCATGCCTAGCCATTTTTGGTTCTATG1240.12754708441765497No Hit
CATAGAACATCGCACACACATGGAACCATGTCGTCAGTGTAGCATTTTAA1230.12651847889815776No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA1200.12343266233966611No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATGACAGGCA1150.11828963474218002No Hit
CATAGACTACCACTACCCAGCACAGCATTTTAACACAGCATTGAAGTTCT1140.11726102922268282No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAATGCTAGGATTATAGGAG1090.11211800162519672No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAGTGTTGGGATTATAGGCGT1070.1100607905862023No Hit
CATAGATCCCAGGCTTTAGAAAATATACCACCCAGTACAGGAGCACCCTC1060.10903218506670506No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGCT1050.10800357954720784No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA1020.1049177629887162No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)