FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807765

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807765
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences298910
Sequences flagged as poor quality0
Sequence length150
%GC44

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA7607225.449800943427785No Hit
CATAGACCTCCTTTCCTCCACGGCAAACACTCAAAACAGCCCTCTATGTG204436.839182362584055No Hit
CATAGATACGATCATAAGGGTGGGGCGAAAGTGATCAGAAGCTCTATGTG147324.928573818206149No Hit
CATAGACACCATTGGAGACCTGAGCATCCCTCATTACTCTGGTTCTATGT126294.225017563815195No Hit
CATAGACCAGCTTTGCATGAGTGTGGGAAGTAGGGAATGATTACAAGTTC87122.9145896758221537No Hit
CATAGACACACCCAACTCTGCTCAGTCTGCATAGCCACATCTATGTGTAG80622.69713291626242No Hit
CATAGATGGTGGGTTCTGGAGAGAGCATCCCTCATTACTCTGGTTCTATG79862.6717072028369744No Hit
CATAGACCAGCTTTGCATGAGTGTGGTTAATGAAGCTCTTCCATGTCCCA68232.2826268776554817No Hit
CATAGACCAGCTTTGCATGAGTGTGGCCTGTGTTCTTTGCATGATCTATG60062.0093004583319396No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGACACTGGGGGCACAAAGTTCT29590.9899300792880801No Hit
CATAGACACACCCAACTCTACTCAGTCTGCATAGCCACATCTATGTGTAG28780.9628316215583286No Hit
CATAGACCTGACCTCATGATCTGCCTGTGTTCTTTGCATGATCTATGTGT26730.8942491050817971No Hit
CATAGAGTTATTCAGAGAGAGGGGAAATGAATGTTGGAGAGGCACATCTA23090.7724733197283463No Hit
CATAGACTGGCGGTGATTGCTTTCCTCCACGGCAAACACTCAAAACAGCC20960.7012144123649259No Hit
CATAGATGATGTGAAAAGGACCCATGGCCTCAGTTTCCCCTCCTTCTATG20390.6821451272958415No Hit
CATAGATGATGTGAAAAGGACCCATGGGAAAGCTGTCTGTGTAGGTGATC19900.6657522331136463No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCACGGCAAACACTCAAAACAGCCCT19580.65504666956609No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTACACTGGCCTCAGTTTCC19510.6527048275400622No Hit
CATAGACTTACTGCCCTCACTCCGTCTGCATAGCCACATCTATGTGTAGA18520.6195844903148104No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGGGGAGACACTGGGGGCACAAA17320.5794386270114751No Hit
CATAGACCAAACACAGAAGACATGGCAAACACTCAAAACAGCCCTCTATG17100.5720785520725302No Hit
CATAGACCTCCTTTCCTCCACGGCAAAGCTGCTATGGGATCTTCTATGTG16670.5576929510555017No Hit
CATAGATGTTTGAAACTCCTCTACCTAAGACACTGGGGGCACAAAGTTCT15660.5239035161085277No Hit
CATAGACCAGCTTTGCATGAGTGTGGCATGGAGAAGGGTCTATGTGTAGA15360.5138670502826937No Hit
CATAGATGATGTGAAAAGGACCCATGGCGTCAGTGTACCAGTGTAGCAGA15330.5128634037001104No Hit
CATAGAGGGGAGACACTGGGGGCACAAAGTTCTATGTGTAGAACCATGTC15300.5118597571175271No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCGAGACTTGGCCTCAGTTTCCCCTC14350.4800776153357198No Hit
CATAGATCCACTGTGCTATCTCTGACACCGTAACCTAGTGATTACCTGGG14240.4763975778662474No Hit
CATAGAGGGGAGACACTGGCTATAAGAACTTGGTCTCATAGAGGGGAGAC13260.44361178950185676No Hit
CATAGACCAGCTTTGCATGAGTGTGGAACACCAGTGTAGCAGACCATCTT13060.4369208122846342No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTGGCCTCAGTTTCCCCTCCTTCTA11440.3827238968251313No Hit
CATAGACTTACTGCCCTCACTCAGTCTGCATAGCCACATCTATGTGTAGA11360.38004750593824227No Hit
CATAGACTTACTGCCCTCACTCCGTCGTCAGTGTATGAATGTTGGAGAGG10940.3659964537820749No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCAAGCAGATCTGTGTTCTATGTGTA10120.3385634471914623No Hit
CATAGATGACCTGTTAATCTGCCCCCGTACCATCAATTTAAGGTAGGCAC9810.3281924325047673No Hit
CATAGACTTTTCCTCCAATATAGCTGCACTTGGCCTCAGTTTCCCCTCCT9710.32484694389615604No Hit
CATAGATGGTGGGTTCTGGAGAGAGGGCGAAAGTGATCAGAAGCTCTATG9630.322170553009267No Hit
CATAGATGATGTGAAAAGGACCCATGGGCGAAAGTGATCAGAAGCTCTAT8720.2917266066709043No Hit
CATAGAACTTGCTCTCAAACTTCAGGGTGCCATCAATTTAAGGTAGGCAC8630.28871566692315415No Hit
CATAGAAAGGCAATGTTCAAGTGGTTTTGAGGTAAAACTATTAGCGAGAC8270.2766719079321535No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGAGGGGAGACACTGGGGGCACA8190.2739955170452645No Hit
CATAGACTTTTCCTCCAATATAGCTGCACTCACACCTCTCTCATAGCAGC7990.26730453982804186No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGCAGAGACTTGGTCTCATAGAG7940.2656317955237362No Hit
CATAGACCAGCTTTGCATGAGTGTGGAACCATGTCGTCAGTGTACCAGTG7930.26529724666287513No Hit
CATAGACTTTTCCTCCAATATAGCTGCACTACACTGGCCTCAGTTTCCCC7930.26529724666287513No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCCGGATTCAAGCAATTCTTCTATGT7660.25626442741962463No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTATTACCAGTGTAGCA7260.24288247298517948No Hit
CATAGATGGTGGGTTCTGGAGAGAGCGTCAGTGGGGAAGTAGGGAATGAT7150.23920243551570708No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTTGGCCTCAGTTTCCCCTCCTTCT7010.23451875146365125No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCCAAGACTTGGCCTCAGTTTCCCCT6680.22347863905523405No Hit
CATAGAGGGGAGACACTGGCTATAAGAATAGAGGGGAGACACTGGGGGCA6360.21277307550767788No Hit
CATAGATGATGTGAAAAGGACCCATGGCCATGCTGAAGTCCCATGATCTA6170.20641664715131647No Hit
CATAGACCAGCTTTGCATGAGTGTAGAACCATGTCGTCAGTGTAGATCTC6100.20407480512528853No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTATTAGCGAGACTCTA6050.2024020608209829No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGGGAGACACTGGGGGCACAAAG5790.19370379043859354No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTTACGGTAGCAAAGCT5670.18968920410826No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTATTAGCGAGAGAAAT5600.18734736208223213No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGACTTGGTCTCATAGAGGGGAG5500.18400187347362082No Hit
CATAGAGGCTGGGTGACTTGGTGAATGGCCTCAGTTTCCCCTCCTTCTAT5300.17731089625639826No Hit
CATAGACTTACTGCCCTCACTCCGTCTACGGTAGCAAACACTCAAAACAG5100.17061991903917567No Hit
CATAGATACGATCATAAGGGTGGGGCTGGGCTCAGTGGCTTATGCCTGTA4830.16158709979592517No Hit
CATAGACCAGCTTTGCATGAGTGTGGGCGAAAGTGATCAGAAGCTCTATG4790.16024890435248068No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCGACTTGGCCTCAGTTTCCCCTCCT4650.15556522030042488No Hit
CATAGACCTGACCTCATGATCTGCCTACCTCCGCCTCCCAAAGTGCTGGG4520.1512160851092302No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA4430.14820514536148005No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTACTTGGCCTCAGTTTCCC4400.14720149877889666No Hit
CAGTTTCCCCTCCTTCTATGTGTAGAACCATGTCGTCAGTGTAGATCTCG4350.14552875447459102No Hit
CATAGAGGGGAGACACTGGCTATAAGAAAGGGGAGACACTGGGGGCACAA4320.14452510789200762No Hit
CATAGATGACCTGTTAATCTGCCCCCACTCAGTCTGCATAGCCACATCTA4290.14352146130942425No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCCATGCTGAAGTCCCATGAT3900.13047405573584023No Hit
CATAGACCAGCTTTGCATGATGTGGCATGGAGAAGGGTCTATGTGTAGAA3890.1301395068749791No Hit
CATAGACTGGCGGTGATTGCTTTCCTCCACGGCAAAGCTGCTATGGGATC3820.1277976648489512No Hit
CATAGACTTCTGTTTGGTCACATGCTCAGTATGAATGTTGGAGAGGCACA3740.12512127396206216No Hit
CATAGACCTGACCTCATGATCTGCCTACTTGGCCTCAGTTTCCCCTCCTT3660.12244488307517312No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCACGGCAAAGCTGCTATGGGATCTT3650.12211033421431199No Hit
CATAGATGTGAGCACTACTGATAATCCCTGATGTGGCATGGAGAAGGGTC3540.11843029674483958No Hit
CATAGAACTTGCTCTCAAACTTCAGGGTGCTCCTCTAGCAAAGCTGCTAT3270.1093974775015891No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGGAGACACTGGGGGCACAAAGT3270.1093974775015891No Hit
CATAGACCTGACCTCATGATCTGCCTTCAGAACGCGGCAAATGGTCTATG3230.10805928205814459No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTATTAGCGGGGCGAAA3150.10538289117125556No Hit
CATAGAAAGGCAATGTTCAAGTGGTTTTAAAATGAGCACCTAACATCTAT3110.10404469572781105No Hit
CATAGACACCATTGGAGACCTGAGCAGTGTCTTTCTGGGTAGCTGCGACC3100.10371014686694992No Hit
CATAGAGGCTGGGTGACTTGGTGAATGTTGGAGAGGCACATCTATGTGTA3050.10203740256264426No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)