FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807772

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807772
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences34456
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG1687848.98421174831669No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCCTCCCAAGTAGCCAGGACTA8532.4756210819596007No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGGAGGTCTATGAG8462.4553053169259345No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCCTCCCAAATAGCCAGGACTA7132.0693057812862783No Hit
CATAGAGCTTCTGATCACTTTCGCCCCACCCTTATGATCGTATCTATGAG6421.8632458788019506No Hit
CATAGAACCAGAGTAATGAGGGATGCTCAGGTCTCCAATGGTGTCTATGA4751.37856977014163No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCAGATTTGGACCTGCGAGCGGGTTC4461.2944044578592988No Hit
CATAGAACTTGTAATCATTCCCTACTTCCCACACTCATGCAAAGCTGGTC4371.2682841885302993No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTCTG3661.0622242860459716No Hit
CATAGAACCAGAGTAATGAGGGATGCTCTCTCCAGAACCCACCATCTATG3120.9055026700719759No Hit
CATAGACCATTTGCCGCGTTCTGAAGACACTGACGACATGGTTCTACACA3090.896795913628976No Hit
CATAGATGTGGCTATGCAGACTGAGCAGAGTTGGGTGTGTCTATGAGACC2810.8155328534943116No Hit
CATAGACCCTTCTCCATGCCACATCATCTATGAGACCAAGTCTCTGCAGC2360.684931506849315No Hit
CATAGAACTTGTAATCATTCCCTACTTCCCCGACATGGTTCTACACATAG1830.5311121430229858No Hit
CATAGAGCCTGGGGTAGTTTTCTCTCAGTTCTATACATAGAGCCTGGGGT1810.5253076387276526No Hit
CATAGATCATGCAAAGAACACAGGCCACACTCATGCAAAGCTGGTCTATG1580.4585558393313211No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAATGGCATTAAATGACTTGCCCAA1550.44984908288832137No Hit
CATAGATGTTAGGTGCTCATTTTAAAACATCAGGGATTATCAGTAGTGCT1430.4150220571163223No Hit
CATAGATGTTAGGTGCTCATTTTAAAACATCAGCATGTTGAGATGAATAA1410.4092175528209891No Hit
CATAGATTAAATGCTGCTATGAGAGAGGTACACTGACGGCATGGTTCTAA1330.3859995356396564No Hit
CATAGATGTGGCTATGCAGACTGAGTAGAGTTGGGTGTGTCTATGAGACC1170.3395635012769909No Hit
CATAGATCACCTACACAGACAGCTTTCCTCCCACCTGGGTAGTTTTTCCA1120.325052240538658No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG1100.3192477362433248No Hit
CATAGAACTTTGTGCCCCCAGTGTCTTCTTATAGCCAGTGTCTCCCCTCT1010.2931274669143255No Hit
CATAGAGGGGCATGCTGGATAAATCTTACGGGGGCAGATTAACAGGTCAT970.2815184583236591No Hit
CATAGATTAAATGCTGCTATGAGAGAGGTACACTGACGACATGGTTCTAA930.2699094497329928No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCTTCCCTAAGTACCAGGATTA880.2553981889946598No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG840.2437891804039935No Hit
CATAGAAGATCCCATAGCAGCTTTGCCTAATAGTTTTTCCAAATATAAGA830.2408869282563269No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG810.23508242396099374No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGCAATCACCGCCA810.23508242396099374No Hit
CATAGAAGATGGTCTGCTACACTGGTACACTGACGACATGGTTCTACACA770.22347341537032736No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTACAGGAGGGAAGGAAGG710.20605990248432782No Hit
CATAGAACTTTGTGCCCCCAGTGTCTTAGGTAGAGGAGTTTCAAACATCT710.20605990248432782No Hit
CATAGATCATGCAAAGAACACAGGCAGATCATGAGGTCAGGTCTATGAGA680.19735314604132806No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG660.1915486417459949No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTTCTTATAGCCAGTGTCT630.1828418853029951No Hit
CATAGAACTTGTAATCATTCCCTACTTCCCTTCTACACATAGATTAAGTG620.17993963315532852No Hit
CATAGAAGATCCCATAGCAGCTTTGCTACCAGTTTTTCCAAATATAAGAT620.17993963315532852No Hit
CATAGAAGAATTGCTTGAATCCGGGAGGGAAGGAAGGGCAAACTCTATGA600.17413512885999535No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGGAAGGAAGGGCAAACT590.17123287671232876No Hit
CATAGATCATGCAAAGAACACAGGCCTCTATGTTAGAACCATGAGGAAAG590.17123287671232876No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATTCTTATAGCCAGTGT580.1683306245646622No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG550.1596238681216624No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG550.1596238681216624No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTCTT530.15381936382632921No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCTACCGTAGACGGAGTGAGGGCAGT530.15381936382632921No Hit
CATAGAAGATCCCATAGCAGCTTTGCCGTGGAGGAAAGGAGGTCTATGAG530.15381936382632921No Hit
CATAGATGTGGCTATGCAGACGGAGTGAGGGCAGTAAGTCTATGAGACCA520.15091711167866265No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG520.15091711167866265No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGGCGCGGTGGCTCATGCCTGTAAT510.14801485953099605No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG500.14511260738332946No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTTCT500.14511260738332946No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATCTGGACCTGCG490.1422103552356629No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCATGTCTTCTGTGTTTGGTCTATG490.1422103552356629No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTGGCTAGTCCGTCACCCCTAAT490.1422103552356629No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCTACCGTAGGCTAGTC470.1364058509403297No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTTCTTA460.1335035987926631No Hit
CATAGACTCAAGCAATCCTCCCACCTCTGCCTCCTTAGTAACTGGGACTA450.1306013466449965No Hit
CATAGAAGAATTGCTTGAATCCGGGAGGCAGAGGTTGCAGTGAGCTGAGA440.1276990944973299No Hit
CATAGAAGGAGGGGAAACTGAGGCCATACCATTGGCTGCTCCTGCAAGCT440.1276990944973299No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGGGAGGGAAGGAAGGGCAAACTC430.12479684234966333No Hit
CATAGAACACAGATCTGCTTGGAGGGAAGGAAGGGCAAACTCTATGAGAC420.12189459020199675No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG420.12189459020199675No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGGCACGGTGGCTCATACCTGTAAT400.11609008590666356No Hit
CATAGATGTGCCTCTCCAACATTCATTACGGGGGCAGATTAACAGGTCAT390.11318783375899699No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGGAGGGAAGGAAGGGCAAACTCT380.1102855816113304No Hit
CATAGACCCTTCTCCATGCCACATCAAGAATGAGGAGAGTACTACTTTCT370.1073833294636638No Hit
CATAGATCATGGGACTTCAGCATGGCAGTGTTTGCAGATTTGGACCTGCG370.1073833294636638No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG370.1073833294636638No Hit
CATAGAGGGGCATGCTGGATAAATCTATGAGGCTAGTCCGTCACCCCTAA370.1073833294636638No Hit
CATAGATCATGGGACTTCAGCATGGCTACGGTAGCATGTTGAGATGAATA360.10448107731599722No Hit
CATAGAAGGAGGGGAAACTGAGACCAAGTCTCTGCTACCGTAGGCATCAT360.10448107731599722No Hit
CATAGATTAAATGCTGCTATGAGAGAGGTCACTGACGACATGGTTCTACA360.10448107731599722No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGGTTGCAGATTTGGACCTGCG360.10448107731599722No Hit
CATAGATCATGGGACTTCAGCATGGTGGTGTTTGCAGATTTGGACCTGCG350.10157882516833062No Hit
CATAGACCCTTCTCCATGCCACATCATTTCCCCTCTCTCTGAATAACTCT350.10157882516833062No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)