FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807778

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807778
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences24906
Sequences flagged as poor quality0
Sequence length150
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG456818.340962017184616No Hit
CATAGATCATGGGACTTCAGCATGGCTCAGGTATGTCTTTATTAGCTCTA16356.5646832088653335No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGTAATAACCAGGCCCCTCTATGAG12795.135308760941139No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAAGGAAGTTTCTGTGAGATC11264.520998956074841No Hit
CATAGACGGATTATTCTCTCCATGGTCTACCAGTTATTAGTTGAATGAGC10094.051232634706496No Hit
CATAGAGAAGACTCCCTCAACCCACCCACAGCCAGGAAAGAATCTATGAG8333.3445756042720634No Hit
CATAGAAATGATGCTGAAGGGCCTGCCCTCTCTGCTGTTCCTTCTATGAG8103.2522283787039266No Hit
CATAGACTCATTGCACTTTCCACAACTGTGTGCTTGAACCAGATTCTATG6732.7021601220589417No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTCTTCCTTTTCTGCCTTCATCTA4391.7626274793222516No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAGGAACCATGGGAGGTCTAT3861.5498273508391553No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC3541.421344254396531No Hit
CATAGACCAGCAGACACTCCCATCATCAAGGAAGTTTCTGTGAGATCTAT2771.1121818035814663No Hit
CATAGACTCATTGCACTTTCCACAACTGTCATTGTCGCTGTCCCATCTAT2741.1001365132899703No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTGCCTCTAAGTAAACTGAAT2571.031879868304826No Hit
CATAGAGAAGACTCCCTCAACCCACGCTGTCCTTCTCTGAATCTATGAGA2420.971653416847346No Hit
CATAGACGTGACTAAAAGCATGTTGGTGGAAGGGTAAGAGAGGGTCTATG2140.8592307074600498No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTTATTTTAAAGGACTGGAAGC2130.8552156106962177No Hit
CATAGACCAGCAGACACTCCCATCATACACTGACGCTATACCACACTACA1770.7106721271982654No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGGGGTAAGGCGTACTGGTCTATGA1660.6665060627961134No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGCCCCAGTGTGAATACTTCT1640.6584758692684494No Hit
CATAGATCATGGGACTTCAGCATGGCACACTGACGACATGGTTCTACACA1480.5942343210471372No Hit
CATAGAAATGATGCTGAAGGGCCTGTTTCCCCACTCAAATACCATCTATG1450.5821890307556412No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGAAGTGATGGGCTAGATCTATGA1410.5661286437003131No Hit
CATAGATCACGTAGAAACTGGAGAGGCTAATCTGAAATCTTCGTGTTCTA1390.5580984501726491No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGCTATACCACACTA1370.5500682566449852No Hit
CATAGATGGCCAAGATACGAGCACATACACTGACGCTATACCACACTACA1330.5340078695896571No Hit
CATAGATGTGTAGCCTGGGTCTGACATGCCAGGAATCAATGTTCTATGAG1320.5299927728258251No Hit
CATAGACCAGCAGACACTCCCATCATTTATTTTAAAGGACTGGAAGCCTC1300.5219625792981611No Hit
CATAGACTCATTGCACTTTCCACAACTGTCCCAACTGTCTCTGAAAAATT1300.5219625792981611No Hit
CATAGATCATGGGACTTCAGCATGGCACACTGACGACATGGAGACAGCCG1120.44969083754918493No Hit
CATAGAGCTGTACTGCATCTTTTCTCAAACTGCTGGGGTTGCTCTATGAG1090.43764554725768895No Hit
CATAGACCAACATTTCTTCTCCCAGGGTCTACCAGTTATTAGTTGAATGA1000.40150967638320084No Hit
CATAGACTCATTGCACTTTCCACAACTGTACACTGACGCTATACCACACT960.3854492893278728No Hit
CATAGAAGGACAAAGACATTTAGGACCCTGCAGTCTTTGGAGGAATCTAT920.36938890227254473No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGACGATCATTGTTCACTGC910.3653738055087128No Hit
CATAGACCTCCGACAGTTTTTATGCACCCACAGCCAGGAAAGAATCTATG890.35734361198104875No Hit
CATAGATCAAGGAAAACACCAGCCCACGCTGTCCTTCTCTGAATCTATGA860.3452983216895527No Hit
CATAGAAAAAACAGTTGGCCAGGCATCTATGGGACATGCCAGGAATCAAT840.33726812816188867No Hit
CATAGACCAGCAGACACTCCCATCATCAGGAACCATGGGAGGTCTATGAG810.3252228378703927No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGTGGAGACAGCCGCTCACCT790.31719264434272865No Hit
CATAGATCAAGGAAAACACCAGCCCAAGGGGTAAGGCGTACTGGTCTATG790.31719264434272865No Hit
CATAGAAAAAACAGTTGGCCAGGCATCTAGGCTAATCTGAAATCTTCGTG760.3051473540512326No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGTATTGAGCAAAACAGGAAGCTC740.2971171605235686No Hit
CATAGACACAACAGAGAGAACGGGCTACCGTATCATCAAGGAAGTTTCTG740.2971171605235686No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGTAGCAGCATAATTTCCCAT740.2971171605235686No Hit
CATAGACCAACATTTCTTCTCCCAGGGTGGAAGGGTAAGAGAGGGTCTAT710.2850718702320726No Hit
CATAGACCGCTTCCCAATTTTTGTAACAACACTGACGCTATACCACACTA710.2850718702320726No Hit
CATAGACCAACATTTCTTCTCCCAGGGTCACTGACGCTATACCACACTAC670.26901148317674456No Hit
CATAGAAGGACAAAGACATTTAGGACCCACGCTGTCCTTCTCTGAATCTA650.2609812896490806No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAGAAGTAGGAAGTATTACCCCT640.2569661928852485No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGACATGCCAGGAATCAATGT610.24492090259375252No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG560.22484541877459246No Hit
CATAGATGTGTAGCCTGGGTCTGACAACACTGACGATCATTGTTCACTGC550.22083032201076044No Hit
CATAGAAAAAACAGTTGGCCAGGCATCTATGTGTGTCCCAACTGTCTCTG540.21681522524692848No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCTGTTTCCCCACTCAAATACCATC540.21681522524692848No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAGGAGCTGAGTCATGGGGTCTATG530.21280012848309643No Hit
CATAGACGGATTATTCTCTCCATGGTCTATGCAAGGGGTAAGGCGTACTG530.21280012848309643No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTAGTGTGGAGACAGCCGCTCACC510.20476993495543244No Hit
CATAGATGGCCAAGATACGAGCACATTGCTTCTTGTGGTAACTGGTCTAT510.20476993495543244No Hit
CATAGACCAGCAGACACTCCCATCATGCTGAAGTGATGGGCTAGATCTAT510.20476993495543244No Hit
CATAGATCATGGGACTTCAGCATGGCCCGATCATTGTTCACTGCAGCCTC510.20476993495543244No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG500.20075483819160042No Hit
CATAGAAAATTTGTGATGGTAAATCATGGGACATGCCAGGAATCAATGTT500.20075483819160042No Hit
CATAGATCATGGGACTTCAGCATGGCACACTGGAGACAGCCGCTCACCTC500.20075483819160042No Hit
CATAGATGGCCAAGATACGAGCACATACACTGACGATCATTGTTCACTGC480.1927246446639364No Hit
CATAGACTCATTGCACTTTCCACAACTGTCGTTGCATGACAGAGCGAGAC480.1927246446639364No Hit
CATAGACCCAAGACCCCAGCCTTTACACACTGTCATTGTCGCTGTCCCAT480.1927246446639364No Hit
CATAGACCGCTTCCCAATTTTTGTAACACACTGACGCTATACCACACTAC460.18469445113627236No Hit
CATAGACACAACAGAGAGAACGGGCTACACTACGCTATACCACACTACAC450.18067935437244037No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGACGCTATACCACACTACA440.17666425760860838No Hit
CATAGATCATGGGACTTCAGCATGGCATAGAGATCCCACCATTTGCCATC440.17666425760860838No Hit
CATAGATCATGGGACTTCAGCATGGCGTCAGTGTGGGCCCCAGTGTGAAT420.16863406408094433No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGACATGGTTCTACA410.16461896731711234No Hit
CATAGACGGATTATTCTCTCCATGGTCTATGACAAGGGGTAAGGCGTACT390.15658877378944833No Hit
CATAGAGCTGTACTGCATCTTTTCTCAGACTGCTGGGGTTGCTCTATGAG390.15658877378944833No Hit
CATAGACGTGACTAAAAGCATGTTGGTCAGTGTGGAGACAGCCGCTCACC390.15658877378944833No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCACTGTGTGCTTGAACCAGATTC380.1525736770256163No Hit
CATAGATCATGGGACTTCAGCATGGCCAGATGTTCTTCCTTTTCTGCCTT380.1525736770256163No Hit
CATAGATCATGGGACTTCAGCATGGCACATAGAGTGTCTGTTTCCCCACT380.1525736770256163No Hit
CATAGATCATGGGACTTCAGCATGGCTCAAGGGGTAAGGCGTACTGGTCT370.1485585802617843No Hit
CATAGAAATGATGCTGAAGGGCCTGCAGAAGTAGGAAGTATTACCCCTCT370.1485585802617843No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGTCAAGGGGTAAGGCGTACT370.1485585802617843No Hit
CATAGACCAGCAGACACTCCCATCATTCAGACTCTATGTGCAAGGGGTAA360.1445434834979523No Hit
CATAGACTCATTGCACTTTCCACAACTGTTCTTCCTTTTCTGCCTTCATC350.1405283867341203No Hit
CATAGAAATGATGCTGAAGGGCCTGCACATAGAAATGATGCTGAAGTGAT340.13651328997028828No Hit
CATAGAGTGTCTGTTTCCCCACTCAAATACCATCTATGAGACCAAGTCTC330.13249819320645628No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGCTGAAGTGATGGGCTAGATCTA320.12848309644262426No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGTAGAGATCCCACCATTTGC320.12848309644262426No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTGCTTCTTGTGGTAACTGGTC310.12446799967879227No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG310.12446799967879227No Hit
CATAGAAGCCATGAACACAGGATTGAGGAGCTGAGTCATGGGGTCTATGA300.12045290291496025No Hit
CATAGACCCAAGACCCCAGCCTTTACCTCTCTTACCCTTCCCCACACCCT290.11643780615112824No Hit
CATAGAGAAGACTCCCTCAACCCACCACACTGGAGACAGCCGCTCACCTC290.11643780615112824No Hit
CATAGAAATGATGCTGAAGGGCCTGTGCTGAAGTGATGGGCTAGATCTAT280.11242270938729623No Hit
CATAGATCATGGGACTTCAGCATGGCCTGACGACATGGTTCTACAAAGGA280.11242270938729623No Hit
CATAGAAAAAACAGTTGGCCAGGCATGTTCTTCCTTTTCTGCCTTCATCT270.10840761262346424No Hit
CATAGACATTTAATCCTCACAATGACCCATTGCTTCTTGTGGTAACTGGT260.1043925158596322No Hit
CATAGAAAAAACAGTTGGCCAGGCATCTATGGTGGAAGGGTAAGAGAGGG260.1043925158596322No Hit
CATAGAAGGACAAAGACATTTAGGACCCCACTGACGACATGGTTCTACAC260.1043925158596322No Hit
CATAGACCTCCGACAGTTTTTATGCACCTTCATTGTTGCTCTATGAGACC260.1043925158596322No Hit
CATAGAAAAAACAGTTGGCCAGGCATCTATGTGCCACGCTGTCCTTCTCT250.10037741909580021No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG250.10037741909580021No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)