FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807782

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807782
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences137867
Sequences flagged as poor quality0
Sequence length150
%GC37

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGACGCGGTATTGTCAGGAGCTAACTGGGATACTGCTCTATGAGACC96186.976288742048496No Hit
CATAGATTACTGGGAGACTGGCGCTCACCTCTATGAGACCAAGTCTCTGC75925.506756511710561No Hit
CATAGAACTGAGGCTGGTAGAGGGAGGCGTGGTATGAGGGGAATCTATGA71165.16149622462228No Hit
CATAGACCTGGTACTTCTCTTCTGGGTCCATTTTTGGTTCTCTTCTATGA70395.105645295828588No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGGCCCATAATACACTTTTCTAT48393.5099044731516607No Hit
CATAGAACTTGTGCTTTTGGTGTCACCCGTAATCCCTCCCTTTTCTATGA47993.480891003648444No Hit
CATAGAGGGAAGAGAAGAGGAGCTGACATCCCAACCACACGTCTATGAGA42493.081955797979212No Hit
CATAGACAGTCCTGCCGTGTACATGTACAGCCTACATCCCTCATCTATGA38872.819383898975099No Hit
CATAGATGTCCCCATTCATCCTGCAAACAGAATGGGACCCATCTATGAGA37202.6982526637991686No Hit
CATAGATTACTGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGCT30502.2122770496202864No Hit
CATAGAAAAGTCACCATGCAGCCCTGTGATTGTCCTTGCACACCATGGAT25571.8546860379931382No Hit
CATAGACGCGGTATTGTCAGGAGCTGACTGGGATACTGCTCTATGAGACC22771.6515917514706202No Hit
CATAGAAAAGTCACCATGCAGCCCTGGGCCCATAATACACTTTTCTATGA20501.4869403120398645No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGAGGAACAGGGAGATGTTCTATG19311.4006252402677943No Hit
CATAGATGCACCAGAAGCCACCTACCGTACCAAGTATATGACACATTACA16591.2033336476459195No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTAC15281.1083145350228842No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCGTGTACAGCCTACATCCCTCAT15001.0880051063706324No Hit
CATAGAGCACCCAACTATCCTTCAGCATGAGAAGAATGGCCTCTATGAGA14881.0793010655196675No Hit
CATAGACCCCCATGCAACCACATCTACACTGACGACATGGTTCTACACAT14571.0568156266546744No Hit
CATAGATCATGAATGACTCCCACTCTGTAGATTATGCTCTCTTCCGCCTT14551.0553649531795135No Hit
CATAGACAGTATGGGGGAAACGGCTCTCTTCCGCCTTTATCCTTCTATGA13120.9516417997055132No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTCCTGGGCCCATAATACACTTTTC10880.7891663704874988No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGTAAGAGTTCTATGA10600.768856941835247No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCCTTGTCCTTGCACACCATGGAT10260.7441954927575126No Hit
CATAGATTACTGGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGC9750.7072033191409112No Hit
CATAGAATCCCTGCCCTTGACCTTGGGGGAAGAGAAACAGAATCTATGAG9710.7043019721905894No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTGGTGAAAAGTAGGGGACAGTTCT9350.6781898496376942No Hit
CATAGAATCCCTGCCCTTGACCTTGGTGAAAAGTAGGGGACAGTTCTATG8660.6281416147446452No Hit
CATAGAAAAGTCACCATGCAGCCCTGGCAAAAGGGTAAGAGTTCTATGAG8640.6266909412694843No Hit
CATAGATGTGTGAGAGAGGGAGAGACAGCCTTCTCTGATACCATCCCTCT8480.6150855534681976No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCAAGTATATGACACATTACACC8420.6107335330427152No Hit
CATAGAGCATCCTCGTAATAGCAAACATTCCAACTCTATAGATTATGCTC7780.564311981837568No Hit
CATAGAATCCCTGCCCTTGTCCTTGCACACCATGGATCTATGAGACCAAG7640.5541572675114421No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTATAGATTATGCTCTCTTCCGCCT7030.5099117265190365No Hit
CATAGAGGCAAGCTAACTCTGAGATCCATCAGAGCATCACCCCTTCTATG6990.5070103795687148No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGCAAACAGAATGGGACCCA6760.4903276346043651No Hit
CATAGACGCGGTATTGTCAGGAGCTGACATCCCAACCACACGTCTATGAG6500.4714688794272741No Hit
CATAGAACTTGTGCTTTTGGTGTCACTTGATCATCCATTGTCTGCTCTAT6380.46276483857630907No Hit
CATAGAGGTTCTTTGTAGACTTACCTGGCAAAAGGGTAAGAGTTCTATGA6120.44390608339921805No Hit
CATAGATTACTGGGAGACTGGCGCTCTCTTCCGCCTTTATCCTTCTATGA5960.4323006955979313No Hit
CATAGAATTCCCCAATGTCCTGTGCAAACAGAATGGGACCCATCTATGAG5870.42577266495970756No Hit
CATAGAACTTGTGCTTTTGGTGTCACAAGCACATTATTATTGGTTGGTTC5830.4228713180093858No Hit
CATAGACCATGTAATACCATCGTGAGCAGTGTACAAGCACATTATTATTG5790.41996997105906414No Hit
CATAGACAGAACACCACACCCCTGTCCTTGTCCTTGCACACCATGGATCT5580.4047378995698753No Hit
CATAGAATTGCCTACTTTGGGACCCATGCAAACAGAATGGGACCCATCTA5300.3844284709176235No Hit
CATAGACCATGTAATACCATCGTGAGCAGTGTGCTCTCTTCCGCCTTTAT4730.3430842768755395No Hit
CATAGATCATGAATGACTCCCACTCTGGTGGTGCTGGAACTAGTTCTATG4720.34235894013795903No Hit
CATAGACCCACTTACACACACAGGTTTTCCGGCTTGAGGTTCTATGAGAC4670.33873225645005695No Hit
CATAGAATTGCCTACTTTGGGACCCAGCATGAGAAGAATGGCCTCTATGA4630.33583090949973526No Hit
CATAGAATTGCCTACTTTGGGACCCACTTTGTTCCCTGGCTTCTCTATGA4580.3322042258118331No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCATGGTTCTACACATAGAACAAG4580.3322042258118331No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGCAAGTGTATGGTCA4370.3169721543226443No Hit
CATAGAAAAGTCACCATGCAGCCCTGGTGGTGCTGGAACTAGTTCTATGA4320.31334547063474216No Hit
CATAGAATTGCCTACTTTGGGACCCATCGGCCGCACTGAAATTGTCTATG4310.31262013389716176No Hit
CATAGAACTTTCAGTAATAGGGGACAAGAACAAGGGCATGGTCAAGTGTC4080.2959373889328121No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCACAATGGGCACACTTAACACCTCT4020.2915853685073295No Hit
CATAGAATTCCCCAATGTCCTGTGCACACCATGGATCTATGAGACCAAGT3950.28650801134426657No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCCTGGGCCCATAATACACTTTTCTA3950.28650801134426657No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCAAA3890.282155990918784No Hit
CATAGACCCACTTACACACACAGGTTTTCCGGCTTGAGGTTCTTCAACAC3630.26329723574169306No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAACAAGGGCATGGTCAAGT3580.25967055205379097No Hit
CATAGAGGCAAGCTAACTCTGAGATCCACAGCCCAGTTTTCCTTCTCTAT3570.2589452153162105No Hit
CATAGACCATGTAATACCATCGTGAGCAGCACCCCTTCATTTTGCTGGAA3560.25821987857863016No Hit
CATAGAGTCATTCCAAACTGTGCACTTGTCCTTGCACACCATGGATCTAT3540.2567692051034693No Hit
CATAGAATTGCCTACTTTGGGACCCATCTGCAAACAGAATGGGACCCATC3470.25169184794040633No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTGAGGTTCTTCAACACAGCTA3450.2502411744652455No Hit
CATAGATGCACCAGAAGCCACCTACCGTAAGCCTTCTCTGATACCATCCC3430.24879050099008465No Hit
CATAGATTGCCTCATTGTGCCAGACAGGAATTAGAGCCAGTTCTGAGTCT3370.24443848056460213No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCTGTCCCCTTCATTTTGCTGGAA3270.23718511318879792No Hit
CATAGATCATGGGACTTCAGCATGGCAAAAGGGCAAGTGTATGGTCAGTT3270.23718511318879792No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTTTTTGAGATGGAGTCTCACT3250.23573443971363706No Hit
CATAGAAGGGCAATTATCTCATCCTAGACGAAGGGCAAGTGTATGGTCAG3140.22775573560025242No Hit
CATAGAATCCCTGCCCTTGACCTTGCACACCATGGATCTATGAGACCAAG3110.22557972538751114No Hit
CATAGACAGAACACCACACCCCTGTCCTTGCACACCATGGATCTATGAGA3040.2205023682244482No Hit
CATAGAATCCCTGCCCTTGACCTTGGGAGGAACAGGGAGATGTTCTATGA2940.21324900084864398No Hit
CATAGATGGCATGTCACTTCCTCAGAGCATCACCCCTTCATTTTGCTGGA2910.21107299063590274No Hit
CATAGATGTCCCCATTCATCCTGCAACAGGGCAAGTGTATGGTCAGTTCT2900.2103476538983223No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCGAACAAGGGCATGGTCAAGTGTC2650.19221423545881175No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAGCATGAGAAGAATGGCCTCTAT2630.1907635619836509No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCAAACAGAATGGGACCCATCTAT2560.18568620482058795No Hit
CATAGATGCACCAGAAGCCACCTACCAAGTATATGACACATTACACCAGT2480.1798835109199446No Hit
CATAGACAGTCCTGCCGTGTACATGTATGGTTCCAACTCTATAGATTATG2390.1733554802817208No Hit
CATAGACAGAACACCACACCCCTGTCTTAGGAGTTCTGGCCCCTGTCTAT2390.1733554802817208No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGAACAAGGGCATGGTCAA2350.17045413333139908No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTGC2330.16900345985623827No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTATTCCAACTCTATAGATTAT2290.16610211290591656No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTACTTAGGAGTTCTGGCCCCT2150.15594739857979067No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGACCAAGTCTCTGCTACC2120.1537713883670494No Hit
CATAGACAGTCCTGCCGTGTACATGTGTACAGCCTACATCCCTCATCTAT2100.15232071489188856No Hit
CATAGAGACCCCCAAGTAGCCTAACTGCCCCCAAGTATATGACACATTAC2070.1501447046791473No Hit
CATAGAGACCCCCAAGTAGCCTAACTGCGACCCCCAAGTATATGACACAT2040.14796869446640604No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTGCAAACAGA2000.14506734751608433No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTGCAAACA1910.13853931687786053No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCCCAGCATGAGAAGAATGGCCTC1840.1334619597147976No Hit
CATAGAGGGAAGAGAAGAGGAGCTGGTGGTGCTGGAACTAGTTCTATGAG1800.13056061276447592No Hit
CATAGACAGAACACCACACCCCTGTCCTTAGGAGTTCTGGCCCCTGTCTA1760.1276592658141542No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCACAGCCCAGTTTTCCTTCTCT1720.12475791886383254No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCACTGTTCTCAGAGGCTGAACC1660.12040589843835No Hit
CATAGAGCAGTGCAGCAGAAGATAGCCTTCTCTGATACCATCCCTCTATG1640.11895522496318915No Hit
CATAGAATTCCCCAATGTCCTTGCACACCATGGATCTATGAGACCAAGTC1600.11605387801286748No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCATCGGCCGCACTGAAATTGTC1440.10444849021158072No Hit
CATAGACAGTCCTGCCGTGTACATGTACGCTGACATCCCAACCACACGTC1430.10372315347400031No Hit
CATAGATCTGGGAGGTGAAGAGGACACACTGACGACATGGTTCTACACAT1430.10372315347400031No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTATGCCTGGCAAAAGGGTAAGAGT1420.10299781673641989No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)