FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807786

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807786
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences131123
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG5305140.45895838258734No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGGAGGTCTATGAG64534.9213334045133195No Hit
CATAGAGCTTCTGATCACTTTCGCCCCACCCTTATGATCGTATCTATGAG48693.713307352638363No Hit
CATAGAACCAGAGTAATGAGGGATGCTCAGGTCTCCAATGGTGTCTATGA39743.030742127620631No Hit
CATAGAACTTGTAATCATTCCCTACTTCCCACACTCATGCAAAGCTGGTC27782.1186214470382767No Hit
CATAGATGTGGCTATGCAGACTGAGCAGAGTTGGGTGTGTCTATGAGACC25181.9203343425638522No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCCTCCCAAATAGCCAGGACTA19011.449783790791852No Hit
CATAGAACTTTGTGCCCCCAGTGTCTTAGGTAGAGGAGTTTCAAACATCT18961.4459705772442668No Hit
CATAGAACCAGAGTAATGAGGGATGCTCTCTCCAGAACCCACCATCTATG18721.4276671522158584No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCCTCCCAAGTAGCCAGGACTA17371.324710386431061No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCAGATTTGGACCTGCGAGCGGGTTC16791.2804771092790739No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTCTG15831.2072634091654402No Hit
CATAGATGTGGCTATGCAGACTGAGTAGAGTTGGGTGTGTCTATGAGACC13781.0509216537144512No Hit
CATAGATCATGCAAAGAACACAGGCCACACTCATGCAAAGCTGGTCTATG12480.951778101477239No Hit
CATAGATGTGGCTATGCAGACGGAGTGAGGGCAGTAAGTCTATGAGACCA8690.6627365145702889No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGGAAGGAAGGGCAAACT7420.5658808904616276No Hit
CATAGATCATGCAAAGAACACAGGCAGATCATGAGGTCAGGTCTATGAGA7300.5567291779474235No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGCAATCACCGCCA7180.5475774654332192No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTAGGGATTATCAGTAGTGCT6780.5170717570525385No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCTTCTTATAGCCAGTGTCTCCCCT6050.46139883925779607No Hit
CATAGACCCTTCTCCATGCCACACTCATGCAAAGCTGGTCTATGAGACCA6030.45987355383876205No Hit
CATAGATGTGCCTCTCCAACATTCATTTCCCCTCTCTCTGAATAACTCTA5840.44538334235793875No Hit
CATAGATGTGGCTATGCAGACTGAGTGAGGGCAGTAAGTCTATGAGACCA5460.416402919396292No Hit
CATAGAAGGAGGGGAAACTGAGGCCACATAGAGGGAGGGAAGGAAGGGCA5320.4057259214630538No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGGGGGGCAGATTAACAGGTCATC5100.38894778185367934No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTTCT5070.3866598537251283No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGGAGGGAAGGAAGGGCAAACTCTA5060.3858972110156113No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCATGTCTTCTGTGTTTGGTCTATG4970.3790334266299581No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG4760.3630179297301007No Hit
CATAGAACTTTGTGCCCCCAGTGTCTTCTTATAGCCAGTGTCTCCCCTCT3480.26539966291192235No Hit
CATAGAACACAGATCTGCTTGGAGGGAAGGAAGGGCAAACTCTATGAGAC3340.2547226649786841No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTTCTTA3230.24633359517399694No Hit
CATAGAAGGAGGGGAAACTGAGGCCATGTCTTCTGTGTTTGGTCTATGAG3180.24252038162641182No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCTTCTTATAGCCAGTGTCTCCC3180.24252038162641182No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCTTAGGTAGAGGAGTTTCAAACAT3120.23794452536930974No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCTTCCCTAAGTACCAGGATTA3010.22955545556462253No Hit
CATAGAAGATGGTCTGCTACACTGGTACACTGCCATGTCTTCTGTGTTTG3000.2287928128551055No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG2950.22497959930752043No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTCTT2930.2234543138884864No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG2900.2211663857599353No Hit
CATAGATGTGCCTCTCCAACATTCATATTGGAGACAGCCGCTCACCTCTA2860.21811581492186724No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGGAGGGAAGGAAGGGCAAACTCT2710.20667617427911197No Hit
CATAGACCCTTCTCCATGCCACATCAGGGATTATCAGTAGTGCTCACATC2700.20591353156959497No Hit
CATAGAGCTTCTGATCACTTTCGCCCTCTCTCCAGAACCCACCATCTATG2640.20133767531249286No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTTCTTATAGCCAGTGTCT2620.19981238989345884No Hit
CATAGATTCTCAGAGGTTCAATTTGGTTTTACACTGACGACATGGTTCTA2570.19599917634587372No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTTCTTATAGCCAGTGTCTCC2380.18150896486505036No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCTACCGTAGGCTAGTC2330.17769575131746526No Hit
CATAGACTCAAGCAATCCTCCCACCTTGACCTCTCAAAGTGCTAGGATTA2220.16930668151277808No Hit
CATAGAAGATCCCATAGCAGCTTTGCCGTGGAGGAAAGGAGGTCTATGAG2200.16778139609374404No Hit
CATAGATGTTAGGTGCTCATTTTAAAACATCAGGGATTATCAGTAGTGCT2110.16091761170809088No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCTCTCCAGAACCCACCATCTATGA2070.15786704087002282No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG2070.15786704087002282No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG1990.15176589919388667No Hit
CATAGATCATGGGACTTCAGCATGGCGATGTTTGCAGATTTGGACCTGCG1940.14795268564630157No Hit
CATAGAAGGAGGGGAAACTGAGACCAAGTCTCTGCTACCGTACGGTGTGT1840.1403262585511314No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG1790.13651304500354627No Hit
CATAGACCCTTCTCCATGCCACATCATGCAAAGCTGGTCTATGAGACCAA1790.13651304500354627No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG1770.13498775958451226No Hit
CATAGATCATGGGACTTCAGCATGGCATGTTGAGATGAATAATTGAGACT1770.13498775958451226No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATCTGGACCTGCG1680.1281239751988591No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG1660.12659868977982505No Hit
CATAGACCCTTCTCCATGCCACATCAGCATGTTGAGATGAATAATTGAGA1630.124310761651274No Hit
CATAGAAGAATTGCTTGAATCCGGGAGGCAGAGGTTGCAGTGAGCTGAGA1580.1204975481036889No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAATGGCATTAAATGACTTGCCCAA1540.11744697726562084No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCA1520.11592169184658678No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG1520.11592169184658678No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG1510.11515904913706977No Hit
CATAGAAGATCCCATAGCAGCTTTGCCATGTCTTCTGTGTTTGGTCTATG1440.10982055017045064No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGTG1420.10829526475141661No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACTTCTTATAGC1400.10676997933238258No Hit
CATAGAACTTGTAATCATTCCCTACTTCCCACACTGAGCATGTGACCAAA1380.10524469391334855No Hit
CATAGATCATGGGACTTCAGCATGGCAGTGTTTGCAGATTTGGACCTGCG1340.10219412307528046No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)