FastQCFastQC Report
Wed 8 May 2024
EGAF00005807788

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807788
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences168584
Total Bases25.2 Mbp
Sequences flagged as poor quality0
Sequence length150
%GC35

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGACGCGGTATTGTCAGGAGCTAACTGGGATACTGCTCTATGAGACC97075.757960423290466No Hit
CATAGACCTGGTACTTCTCTTCTGGGTCCATTTTTGGTTCTCTTCTATGA81164.814217244815641No Hit
CATAGAACTGAGGCTGGTAGAGGGAGGCGTGGTATGAGGGGAATCTATGA70604.187823280975656No Hit
CATAGATTACTGGGAGACTGGCGCTCACCTCTATGAGACCAAGTCTCTGC67714.01639538746263No Hit
CATAGATGTCCCCATTCATCCTGCAAACAGAATGGGACCCATCTATGAGA49352.927324063968111No Hit
CATAGAACTTGTGCTTTTGGTGTCACCCGTAATCCCTCCCTTTTCTATGA47202.7997912020120532No Hit
CATAGACAGTCCTGCCGTGTACATGTACAGCCTACATCCCTCATCTATGA45802.7167465477150854No Hit
CATAGAGGGAAGAGAAGAGGAGCTGACATCCCAACCACACGTCTATGAGA43522.5815023964314525No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGGCCCATAATACACTTTTCTAT43362.5720115787975133No Hit
CATAGAAAAGTCACCATGCAGCCCTGGCAAAAGGGTAAGAGTTCTATGAG29941.775969249750866No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGAGGAACAGGGAGATGTTCTATG28861.7119062307217765No Hit
CATAGATTACTGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGCT27621.638352394058748No Hit
CATAGACAGTATGGGGGAAACGGCTCTCTTCCGCCTTTATCCTTCTATGA26961.599202771318749No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTGAGGTTCTTCAACACAGCTA25101.4888720163242064No Hit
CATAGAAAAGTCACCATGCAGCCCTGGGCCCATAATACACTTTTCTATGA18261.0831395624733071No Hit
CATAGAAAAGTCACCATGCAGCCCTGTGATTGTCCTTGCACACCATGGAT18041.0700896882266406No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAACAAGGGCATGGTCAAGT17911.0623783988990652No Hit
CATAGACGCGGTATTGTCAGGAGCTGACTGGGATACTGCTCTATGAGACC17141.016703839035733No Hit
CATAGATGTGTGAGAGAGGGAGAGACAGCCTTCTCTGATACCATCCCTCT15110.8962890903051298No Hit
CATAGAGGCAAGCTAACTCTGAGATCCATCAGAGCATCACCCCTTCTATG14730.8737483984245243No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCGTGTACAGCCTACATCCCTCAT13530.8025672661699805No Hit
CATAGAATCACTTGAGTTTGTAAAAGCAGAGGAATTAGAGCCAGTTCTGA12080.7165567313624068No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGTAAGAGTTCTATGA11630.689863806766953No Hit
CATAGATTACTGGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGC11570.6863047501542258No Hit
CATAGAGCACCCAACTATCCTTCAGCATGAGAAGAATGGCCTCTATGAGA11510.6827456935414986No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGCAAGTGTATGGTCA11430.678000284724529No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCCAGCATGAGAAGAATGGCCTCT11350.6732548759075595No Hit
CATAGAATCCCTGCCCTTGACCTTGGGAGGAACAGGGAGATGTTCTATGA11030.6542732406396811No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTATAGATTATGCTCTCTTCCGCCT10860.6441892469036208No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCCTTGTCCTTGCACACCATGGAT10750.6376643097802875No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTAC10680.6335120770654391No Hit
CATAGAATCCCTGCCCTTGACCTTGGGGGAAGAGAAACAGAATCTATGAG9690.5747876429554406No Hit
CATAGAACTTGTGCTTTTGGTGTCACTTGATCATCCATTGTCTGCTCTAT9620.5706354102405923No Hit
CATAGAATTGCCTACTTTGGGACCCAGCATGAGAAGAATGGCCTCTATGA9470.5617377687087742No Hit
CATAGACTTTCTGAAATTGTTTGCTGCTTTGGGGGAAGAGAAACAGAATC9440.5599582404024106No Hit
CATAGACGCGGTATTGTCAGGAGCTGACATCCCAACCACACGTCTATGAG9300.551653774972714No Hit
CATAGATCATGGGACTTCAGCATGGCAAAAGGGCAAGTGTATGGTCAGTT8930.5297062591942295No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTCCTGGGCCCATAATACACTTTTC8770.5202154415602904No Hit
CATAGAGCAGTGCAGCAGAAGATAGCCAGTGTACAAACCAAACAATAGCC8760.5196222654581693No Hit
CATAGATGCACCAGAAGCCACCTACCGTACCAAGTATATGACACATTACA8440.5006406301902908No Hit
CATAGAGCACCCAACTATCCTTCAGCAACACTGACGACAATGGGCACACT8370.49648839747544254No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGCAAACAGAATGGGACCCA7950.4715750011863522No Hit
CATAGAATTCCCCAATGTCCTGTGCAAACAGAATGGGACCCATCTATGAG7800.46267735965453427No Hit
CATAGATCATGAATGACTCCCACTCTGGTGGTGCTGGAACTAGTTCTATG7650.45377971812271634No Hit
CATAGAGCATCCTCGTAATAGCAAACATTTGGGGGAAGAGAAACAGAATC7510.4454752526930195No Hit
CATAGATTACTGGGAGACTGGCGCTCTCTTCCGCCTTTATCCTTCTATGA7370.43717078726332276No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGTGGTGCTGGAACTAGTTCTATG7110.42174820860817164No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCACAGCCCAGTTTTCCTTCTCT7070.41937550419968683No Hit
CATAGATTTGGCACTCACATACACGCTGACATCCCAACCACACGTCTATG6920.4104778626678688No Hit
CATAGAGGCAAGCTAACTCTGAGATCCATGTCGCTTAGGAGTTCTGGCCC6740.3998006928296873No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCAAGTATATGACACATTACACC6730.39920751672756605No Hit
CATAGACCATGTAATACCATCGTGAGCAGGATGACTTATGGAATCTGAAG6480.3843781141745361No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAGCATGAGAAGAATGGCCTCTAT6450.3825985858681726No Hit
CATAGAATCCCTGCCCTTGTCCTTGCACACCATGGATCTATGAGACCAAG6440.38200540976605135No Hit
CATAGAGACCCCCAAGTAGCCTAACTGCCCCCAAGTATATGACACATTAC5880.34878754804726425No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCAGCATGAGAAGAATGGCCTCT5840.34641484363877945No Hit
CATAGACAGAACACCACACCCCTGTCCTTGTCCTTGCACACCATGGATCT5800.3440421392302947No Hit
CATAGATCATGAATGACTCCCACTCTGTAGATTATGCTCTCTTCCGCCTT5710.3387035543112039No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTATTCCAACTCTATAGATTAT5490.32565368006453754No Hit
CATAGAGTCATTCCAAACTGTGCACTTGTCCTTGCACACCATGGATCTAT5440.32268779955393156No Hit
CATAGAGAAAGGCAGGCGAAGTTAGCCTTCTCTGATACCATCCCTCTATG5390.3197219190433256No Hit
CATAGACAGAACACCACACCCCTGTCCTTGCACACCATGGATCTATGAGA4940.2930289944478717No Hit
CATAGAGGTTCTTTGTAGACTTACCTGGCAAAAGGGTAAGAGTTCTATGA4860.2882835856309021No Hit
CATAGACCCACTTACACACACAGGTTTGGGGGAAGAGAAACAGAATCTAT4760.2823518246096901No Hit
CATAGAGAAAGGCAGGCGAAGTTAGCTTTGGGGGAAGAGAAACAGAATCT4740.2811654724054477No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCTGGTGGTGCTGGAACTAGTTCT4630.2746405352821146No Hit
CATAGAATTGCCTACTTTGGGACCCATGCAAACAGAATGGGACCCATCTA4600.27286100697575094No Hit
CATAGATGGCATGTCACTTCCTCAGAGCATCACCCCTTCATTTTGCTGGA4570.27108147866938737No Hit
CATAGAATCACTTGAGTTTGTAAAAGCAGAGGAAAATGTCAGTGGGCCAT4550.26989512646514496No Hit
CATAGACCCCCATGCAACCACATCTACACTGACGACATGGTTCTACACAT4410.2615906610354482No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCCTGGGCCCATAATACACTTTTCTA4200.24913396289090306No Hit
CATAGAAGGGCAATTATCTCATCCTAGACGAAGGGCAAGTGTATGGTCAG4040.2396431452569639No Hit
CATAGACCCCCATGCAACCACATCTACACTGACGACATCGGCCGCACTGA3990.2366772647463579No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTACAAGCACATTATTATTGGT3930.23311820813363074No Hit
CATAGAACTTGTGCTTTTGGTGTCACAAGCACATTATTATTGGTTGGTTC3920.23252503203150954No Hit
CATAGAGCAGTGCAGCAGAAGATAGCCTTCTCTGATACCATCCCTCTATG3880.23015232762302473No Hit
CATAGAATTGCCTACTTTGGGACCCATCTGCAAACAGAATGGGACCCATC3860.22896597541878233No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTGCAAACAGA3810.22600009490817635No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGACCAAGAACAAGGGCAT3780.22422056660181275No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGGATAAGGAATTAGAGCCAGTTC3730.22125468609120674No Hit
CATAGACTTTCTGAAATTGTTTGCTGCTTTGCCAAGATTGTAGGAGTAGA3630.21532292506999479No Hit
CATAGACAGAACACCACACCCCTGTCACCACAGCCCAGTTTTCCTTCTCT3520.2087979879466616No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTACTTAGGAGTTCTGGCCCCT3490.207018459640298No Hit
CATAGACCATGTAATACCATCGTGAGCAGTGTATTTAAATGTTAGCTGTC3340.19812081810848003No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCAAA3290.19515493759787406No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCCCTGTGATTGTCCTGGTCTATG3260.19337540929151045No Hit
CATAGACCCCCATGCAACCACATCTATCCAAGTATATGACACATTACACC3220.19100270488302568No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGTGGTGCTGGAACTAGTTCTAT3210.19040952878090447No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGTCCATTTTTGGTTCTCTTCTAT3190.18922317657666207No Hit
CATAGAGACCCCCAAGTAGCCTAACTGCAAACAGAATGGGACCCATCTAT3110.1844777677596925No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGACAAGCACATTATTATTGGTTG3100.18388459165757132No Hit
CATAGAAAAGTCACCATGCAGCCCTGGTGGTGCTGGAACTAGTTCTATGA3090.18329141555545012No Hit
CATAGACAGTCCTGCCGTGTACATGTGGTGAAAAGTAGGGGACAGTTCTA3010.17854600673848053No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTACATCGGCCGCACTGAAATT3000.1779528306363593No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCAAACAGAATGGGACCCATCTATGA2930.17380059792151092No Hit
CATAGAATTCCCCAATGTCCTGTGCACACCATGGATCTATGAGACCAAGT2900.17202106961514735No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGGAGGAACAGGGAGATGTTCTAT2780.164902956389693No Hit
CATAGAATCCCTGCCCTTGACCTTGCACACCATGGATCTATGAGACCAAG2760.1637166041854506No Hit
CATAGAGCATCCTCGTAATAGCAAACATTGTCCTTGCACACCATGGATCT2750.16312342808332939No Hit
CATAGAATTCCCCAATGTCCTGTGCATCGGCCGCACTGAAATTGTCTATG2710.16075072367484458No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCTACCGTATCCCTCTCCCCAAAATT2670.15837801926635978No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAGGATGACTTATGGAATCTGA2640.1565984909599962No Hit
CATAGAGCATCCTCGTAATAGCAAACATTTCAGAAAGTCATCGGCCGCAC2630.156005314857875No Hit
CATAGATGCACCAGAAGCCACCTACCACACTGACGACAATGGGCACACTT2450.14532814501969346No Hit
CATAGAGCATCCTCGTAATAGCAAACATTATAGAGCCTTCTCTGATACCA2410.14295544061120866No Hit
CATAGACAGAACACCACACCCCTGTCTATCTTAGGAGTTCTGGCCCCTGT2400.14236226450908746No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAGGATGACTTATGGAATCTGAAG2380.14117591230484505No Hit
CATAGATGCACCAGAAGCCACCTACCCCTTTACCTACCTTCTCAGCTCTA2320.13761685569211787No Hit
CATAGAATCCCTGCCCTTGACCTTGGTGAAAAGTAGGGGACAGTTCTATG2280.1352441512836331No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAGGAAAATGTCAGTGGGCCA2200.13049874246666351No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGAACAAGGGCATGGTCAA2200.13049874246666351No Hit
CATAGAATTCCCCAATGTCCTTGCACACCATGGATCTATGAGACCAAGTC2110.1251601575475727No Hit
CATAGACAGAACACCACACCCCTGTCTATGAGACCAAGTCTCTGCTTAGG2060.12219427703696673No Hit
CATAGAACCCTGCTTCCTAAATCAACATCACTTGATCATCCATTGTCTGC2020.11982157262848195No Hit
CATAGATCTGCTCACCTAAATTTCGTTCAGTGTACAAGCACATTATTATT2020.11982157262848195No Hit
CATAGATCTGCTCACCTAAATTTCGTTCAGTGTAGTCACTCAAATATAGA2010.11922839652636075No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAGGGCAAGTGTATGGTCAGT2000.11863522042423955No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTAGGAGTTCTGGCCCCTGTCT1940.11507616381151237No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAAGGAATTAGAGCCAGTTCT1940.11507616381151237No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAGGAATTAGAGCCAGTTCTGAGT1930.11448298770939117No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAGGAATTAGAGCCAGTTCTG1910.11329663550514878No Hit
CATAGATGCACCAGAAGCCACCTACCTGGGCCCATAATACACTTTTCTAT1830.1085512266881792No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTGGTGGTGCTGGAACTAGTTCTA1810.10736487448393679No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCCCTGGCAAAAGGGTAAGAGTTCTA1790.10617852227969439No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTGAACAAGGGCATGGTCAAGTGT1780.1055853461775732No Hit
CATAGATGTCCCCATTCATCCTGCAACAGGGCAAGTGTATGGTCAGTTCT1780.1055853461775732No Hit
CATAGAATTCCCCAATGTCCTGTGCATTGTCCTTGCACACCATGGATCTA1770.104992170075452No Hit
CATAGAATTGCCTACTTTGGGACCCATCATCGGCCGCACTGAAATTGTCT1760.1043989939733308No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAAGGATGACTTATGGAATCT1750.1038058178712096No Hit
CATAGAATTCCCCAATGTCCTGTGCACTCCAGTCTCGGCAACAAGTCTAT1720.10202628956484602No Hit
CATAGACTTTCTGAAATTGTTTGCTGCTTTTACAAACCATCGGCCGCACT1710.10143311346272482No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)